RNA–Protein interactions for RNA: ENST00000406516.5

LIMK2-204, Transcript of LIM domain kinase 2, humanhuman

TSL 5 BASIC

Gene LIMK2, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-204ENST00000406516 PF4P02776 101 aa10.85□□□□□ -0.67
LIMK2-204ENST00000406516 RPL36AP83881 106 aaKnown RBP10.85□□□□□ -0.67
LIMK2-204ENST00000406516 LINC00242Q5T6M2 205 aa10.85□□□□□ -0.67
LIMK2-204ENST00000406516 RPL36ALQ969Q0 106 aaKnown RBP10.85□□□□□ -0.67
LIMK2-204ENST00000406516 TRAV13-1A0A0B4J241 112 aa10.85□□□□□ -0.67
LIMK2-204ENST00000406516 A0A0U1RRA0 63 aa10.85□□□□□ -0.67
LIMK2-204ENST00000406516 A0A1B0GV72 72 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 GAGE12JA6NER3 117 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 M0QXV9 152 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 GAGE4Q13068 117 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 GAGE5Q13069 117 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 Q9H8V8 135 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 CIDEAO60543 219 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 RPL13AP40429 203 aaKnown RBP10.84□□□□□ -0.67
LIMK2-204ENST00000406516 HERVK_113P63121 156 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 NTM-AS1Q6ZSK4 140 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 CLEC2BQ92478 149 aa10.84□□□□□ -0.67
LIMK2-204ENST00000406516 TIMM17BO60830 172 aa10.83□□□□□ -0.68
LIMK2-204ENST00000406516 LINC00482Q8N8I6 264 aa10.83□□□□□ -0.68
LIMK2-204ENST00000406516 NOP10Q9NPE3 64 aaKnown RBP10.83□□□□□ -0.68
LIMK2-204ENST00000406516 TRBV10-2A0A0K0K1G8 114 aa10.83□□□□□ -0.68
LIMK2-204ENST00000406516 CKS1BP61024 79 aa10.83□□□□□ -0.68
LIMK2-204ENST00000406516 TEX49A0A1B0GTD5 131 aa10.82□□□□□ -0.68
LIMK2-204ENST00000406516 COX6CP09669 75 aa10.82□□□□□ -0.68
LIMK2-204ENST00000406516 IFITM1P13164 125 aa10.82□□□□□ -0.68
LIMK2-204ENST00000406516 CIRBPQ14011 172 aaKnown RBP10.82□□□□□ -0.68
LIMK2-204ENST00000406516 WFDC10AQ9H1F0 79 aa10.82□□□□□ -0.68
LIMK2-204ENST00000406516 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 TRBV10-1A0A0K0K1A3 114 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 CMYA5Q8N3K9 4069 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 TRAV4A0A0B4J268 109 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 TMEM262E9PQX1 116 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 DAZ2Q13117 558 aaKnown RBP10.81□□□□□ -0.68
LIMK2-204ENST00000406516 DAZ4Q86SG3 579 aaKnown RBP10.81□□□□□ -0.68
LIMK2-204ENST00000406516 DAZ3Q9NR90 486 aaKnown RBP10.81□□□□□ -0.68
LIMK2-204ENST00000406516 SMIM1B2RUZ4 78 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
LIMK2-204ENST00000406516 LINC00308Q8TCZ7 52 aa10.8□□□□□ -0.68
LIMK2-204ENST00000406516 RNF183Q96D59 192 aa10.8□□□□□ -0.68
LIMK2-204ENST00000406516 H7C423 109 aa10.8□□□□□ -0.68
LIMK2-204ENST00000406516 WFDC9Q8NEX5 89 aa10.8□□□□□ -0.68
LIMK2-204ENST00000406516 RPL35AP18077 110 aaKnown RBP10.79□□□□□ -0.68
LIMK2-204ENST00000406516 GAGE7O76087 117 aa10.79□□□□□ -0.68
LIMK2-204ENST00000406516 GIG44P09565 113 aaPredicted RBP10.79□□□□□ -0.68
LIMK2-204ENST00000406516 GAGE12FP0CL80 117 aa10.79□□□□□ -0.68
LIMK2-204ENST00000406516 GAGE12GP0CL81 117 aa10.79□□□□□ -0.68
LIMK2-204ENST00000406516 GAGE12IP0CL82 117 aa10.79□□□□□ -0.68
LIMK2-204ENST00000406516 CDC42SE2Q9NRR3 84 aa10.79□□□□□ -0.68
LIMK2-204ENST00000406516 TRGV2A0A075B6R0 118 aa10.78□□□□□ -0.68
LIMK2-204ENST00000406516 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
LIMK2-204ENST00000406516 CSDC2Q9Y534 153 aaKnown RBP10.78□□□□□ -0.68
LIMK2-204ENST00000406516 LOC100131303A0A0U1RQF7 123 aa10.78□□□□□ -0.68
LIMK2-204ENST00000406516 UBE2L6O14933 153 aa10.78□□□□□ -0.68
LIMK2-204ENST00000406516 LST1O00453 97 aa10.77□□□□□ -0.69
LIMK2-204ENST00000406516 MEIG1Q5JSS6 88 aa10.77□□□□□ -0.69
LIMK2-204ENST00000406516 FAM19A3Q7Z5A8 133 aa10.77□□□□□ -0.69
LIMK2-204ENST00000406516 SOSTDC1Q6X4U4 206 aa10.76□□□□□ -0.69
LIMK2-204ENST00000406516 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
LIMK2-204ENST00000406516 PLAC8L1A1L4L8 177 aa10.76□□□□□ -0.69
LIMK2-204ENST00000406516 TMEM243Q9BU79 118 aa10.76□□□□□ -0.69
LIMK2-204ENST00000406516 MGAM2Q2M2H8 2515 aa10.76□□□□□ -0.69
LIMK2-204ENST00000406516 F5H768 121 aa10.75□□□□□ -0.69
LIMK2-204ENST00000406516 OXLD1Q5BKU9 147 aa10.75□□□□□ -0.69
LIMK2-204ENST00000406516 TRAV8-4A0A0B4J246 113 aa10.75□□□□□ -0.69
LIMK2-204ENST00000406516 H3BT86 120 aa10.74□□□□□ -0.69
LIMK2-204ENST00000406516 C16orf74Q96GX8 76 aa10.74□□□□□ -0.69
LIMK2-204ENST00000406516 IGKV3OR2-268A0A0C4DH90 116 aa10.73□□□□□ -0.69
LIMK2-204ENST00000406516 TRGV4A0A0C4DH28 118 aa10.72□□□□□ -0.69
LIMK2-204ENST00000406516 SNCGO76070 127 aa10.71□□□□□ -0.69
LIMK2-204ENST00000406516 GAGE6Q13070 117 aa10.71□□□□□ -0.69
LIMK2-204ENST00000406516 C19orf73Q9NVV2 129 aa10.71□□□□□ -0.69
LIMK2-204ENST00000406516 IGLV1-51P01701 117 aa10.71□□□□□ -0.7
LIMK2-204ENST00000406516 CMC4P56277 68 aaPredicted RBP10.71□□□□□ -0.7
LIMK2-204ENST00000406516 COPS9Q8WXC6 57 aa10.71□□□□□ -0.7
LIMK2-204ENST00000406516 TRBV6-4A0A1B0GX49 114 aa10.7□□□□□ -0.7
LIMK2-204ENST00000406516 HERV-K104P63124 156 aa10.7□□□□□ -0.7
LIMK2-204ENST00000406516 C9orf66Q5T8R8 295 aa10.7□□□□□ -0.7
LIMK2-204ENST00000406516 CSNK1G2-AS1Q8NCQ2 148 aa10.7□□□□□ -0.7
LIMK2-204ENST00000406516 TOMM7Q9P0U1 55 aa10.69□□□□□ -0.7
LIMK2-204ENST00000406516 COX7A2LO14548 114 aa10.69□□□□□ -0.7
LIMK2-204ENST00000406516 NOTCH1P46531 2555 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 IGLV4-60A0A075B6I1 120 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 TRAV26-1A0A087WT03 109 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 GAGE2BQ13066 116 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 GAGE2EQ4V326 116 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 C15orf53Q8NAA6 179 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 OVOL2Q9BRP0 275 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 ANAPC13Q9BS18 74 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 GAGE2DQ9UEU5 116 aa10.68□□□□□ -0.7
LIMK2-204ENST00000406516 NBEAL1Q6ZS30 2694 aa10.67□□□□□ -0.7
LIMK2-204ENST00000406516 CHCHD5Q9BSY4 110 aa10.67□□□□□ -0.7
LIMK2-204ENST00000406516 COX7B2Q8TF08 81 aa10.67□□□□□ -0.7
LIMK2-204ENST00000406516 FHL2Q14192 279 aa10.66□□□□□ -0.7
LIMK2-204ENST00000406516 WIPF1O43516 503 aa10.66□□□□□ -0.7
LIMK2-204ENST00000406516 TRBV6-8A0A0A6YYG3 113 aa10.65□□□□□ -0.7
LIMK2-204ENST00000406516 KRTAP10-11P60412 298 aa10.65□□□□□ -0.7
LIMK2-204ENST00000406516 TTC32Q5I0X7 151 aa10.65□□□□□ -0.7
LIMK2-204ENST00000406516 FAM110AQ9BQ89 295 aa10.65□□□□□ -0.7
LIMK2-204ENST00000406516 MIR7-3HGQ8N6C7 128 aa10.65□□□□□ -0.7
LIMK2-204ENST00000406516 DEFB130BP0DP73 79 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms