RNA–Protein interactions for RNA: ENST00000405692.2

PDGFA-204, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 5

Gene PDGFA, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-204ENST00000405692 C5orf38Q86SI9 138 aa13.42□□□□□ -0.26
PDGFA-204ENST00000405692 TOMM6Q96B49 74 aa13.42□□□□□ -0.26
PDGFA-204ENST00000405692 LINC01546A6NGU7 62 aa13.41□□□□□ -0.26
PDGFA-204ENST00000405692 SMR3BP02814 79 aaPredicted RBP13.41□□□□□ -0.26
PDGFA-204ENST00000405692 SCXQ7RTU7 201 aa13.41□□□□□ -0.26
PDGFA-204ENST00000405692 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
PDGFA-204ENST00000405692 IGIPA6NJ69 53 aa13.4□□□□□ -0.26
PDGFA-204ENST00000405692 TIMM17AQ99595 171 aa13.4□□□□□ -0.26
PDGFA-204ENST00000405692 IGHV3OR16-9A0A0B4J2B5 98 aa13.39□□□□□ -0.27
PDGFA-204ENST00000405692 Q5VSD8 79 aa13.39□□□□□ -0.27
PDGFA-204ENST00000405692 AMELXQ99217 191 aa13.39□□□□□ -0.27
PDGFA-204ENST00000405692 ERASQ7Z444 233 aa13.38□□□□□ -0.27
PDGFA-204ENST00000405692 CARD19Q96LW7 228 aa13.38□□□□□ -0.27
PDGFA-204ENST00000405692 SCGB3A1Q96QR1 104 aa13.38□□□□□ -0.27
PDGFA-204ENST00000405692 KRTAP4-5Q9BYR2 181 aa13.38□□□□□ -0.27
PDGFA-204ENST00000405692 UBE2D1P51668 147 aa13.37□□□□□ -0.27
PDGFA-204ENST00000405692 SYCNQ0VAF6 134 aa13.37□□□□□ -0.27
PDGFA-204ENST00000405692 OR10D4PQ8NGN7 298 aa13.37□□□□□ -0.27
PDGFA-204ENST00000405692 CIRBP-AS1Q8TBR5 109 aa13.37□□□□□ -0.27
PDGFA-204ENST00000405692 SEC11AP67812 179 aa13.36□□□□□ -0.27
PDGFA-204ENST00000405692 LINC00242Q5T6M2 205 aa13.36□□□□□ -0.27
PDGFA-204ENST00000405692 C2orf48Q96LS8 159 aa13.36□□□□□ -0.27
PDGFA-204ENST00000405692 YPEL4Q96NS1 127 aa13.36□□□□□ -0.27
PDGFA-204ENST00000405692 IGLV4-69A0A075B6H9 119 aa13.35□□□□□ -0.27
PDGFA-204ENST00000405692 RAB5BP61020 215 aa13.35□□□□□ -0.27
PDGFA-204ENST00000405692 C18orf32Q8TCD1 76 aa13.35□□□□□ -0.27
PDGFA-204ENST00000405692 LINC00526Q96FQ7 95 aa13.35□□□□□ -0.27
PDGFA-204ENST00000405692 DPH3Q96FX2 82 aa13.35□□□□□ -0.27
PDGFA-204ENST00000405692 F8WDY8 70 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 COX6A2Q02221 97 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 SPAG11BQ08648 103 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 LINC00173Q6ZV60 143 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 ORAOV1Q8WV07 137 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 CAMK2N2Q96S95 79 aa13.34□□□□□ -0.27
PDGFA-204ENST00000405692 A0A087WZ39 114 aa13.33□□□□□ -0.28
PDGFA-204ENST00000405692 PLA2G1BP04054 148 aaKnown RBP13.33□□□□□ -0.28
PDGFA-204ENST00000405692 LINC00614P0C842 121 aa13.33□□□□□ -0.28
PDGFA-204ENST00000405692 CIRBPQ14011 172 aaKnown RBP13.33□□□□□ -0.28
PDGFA-204ENST00000405692 CBLN2Q8IUK8 224 aa13.33□□□□□ -0.28
PDGFA-204ENST00000405692 LINC00528Q8N1L1 170 aa13.33□□□□□ -0.28
PDGFA-204ENST00000405692 LINC01561Q8N1V8 128 aa13.33□□□□□ -0.28
PDGFA-204ENST00000405692 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.33□□□□□ -0.28
PDGFA-204ENST00000405692 FAM19A3Q7Z5A8 133 aa13.32□□□□□ -0.28
PDGFA-204ENST00000405692 ZC2HC1BQ5TFG8 222 aa13.31□□□□□ -0.28
PDGFA-204ENST00000405692 LINC00474Q9P2X8 69 aa13.31□□□□□ -0.28
PDGFA-204ENST00000405692 HERVK_113P63121 156 aa13.3□□□□□ -0.28
PDGFA-204ENST00000405692 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
PDGFA-204ENST00000405692 Q6ZRU5 148 aa13.29□□□□□ -0.28
PDGFA-204ENST00000405692 SPACA4Q8TDM5 124 aa13.29□□□□□ -0.28
PDGFA-204ENST00000405692 GEMIN7Q9H840 131 aaKnown RBP13.29□□□□□ -0.28
PDGFA-204ENST00000405692 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.28□□□□□ -0.28
PDGFA-204ENST00000405692 PANO1I0J062 215 aa13.28□□□□□ -0.28
PDGFA-204ENST00000405692 IGKV2-24A0A0C4DH68 120 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 LOC107984640A0A0U1RRK4 108 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 NDUFA1O15239 70 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 HBDP02042 147 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 CHTF8P0CG12 524 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 RNF151Q2KHN1 245 aa13.27□□□□□ -0.29
PDGFA-204ENST00000405692 INAFM2P0DMQ5 153 aa13.26□□□□□ -0.29
PDGFA-204ENST00000405692 PMVKQ15126 192 aa13.26□□□□□ -0.29
PDGFA-204ENST00000405692 MAJINQ3KP22 176 aa13.26□□□□□ -0.29
PDGFA-204ENST00000405692 MRPL35Q9NZE8 188 aaKnown RBP13.26□□□□□ -0.29
PDGFA-204ENST00000405692 A0A087WYN8 130 aa13.25□□□□□ -0.29
PDGFA-204ENST00000405692 URB1-AS1Q96HZ7 61 aa13.25□□□□□ -0.29
PDGFA-204ENST00000405692 PACRGQ96M98 296 aaPredicted RBP13.25□□□□□ -0.29
PDGFA-204ENST00000405692 CST9LQ9H4G1 147 aa13.25□□□□□ -0.29
PDGFA-204ENST00000405692 A0A096LNI7 61 aa13.24□□□□□ -0.29
PDGFA-204ENST00000405692 CHCHD1Q96BP2 118 aaKnown RBP13.24□□□□□ -0.29
PDGFA-204ENST00000405692 PLAC8Q9NZF1 115 aa13.24□□□□□ -0.29
PDGFA-204ENST00000405692 A0A0J9YXV3 536 aa13.23□□□□□ -0.29
PDGFA-204ENST00000405692 TINCRA0A1B0GVN0 87 aa13.23□□□□□ -0.29
PDGFA-204ENST00000405692 PRSS2P07478 247 aa13.23□□□□□ -0.29
PDGFA-204ENST00000405692 A0A096LNJ9 63 aa13.22□□□□□ -0.29
PDGFA-204ENST00000405692 ATP5LO75964 103 aa13.22□□□□□ -0.29
PDGFA-204ENST00000405692 CDKN2A-AS1Q9UH64 79 aa13.22□□□□□ -0.29
PDGFA-204ENST00000405692 TRGC2P03986 189 aa13.21□□□□□ -0.29
PDGFA-204ENST00000405692 KIAA0087Q14695 138 aa13.21□□□□□ -0.29
PDGFA-204ENST00000405692 LINC00469Q8N7U9 141 aa13.21□□□□□ -0.29
PDGFA-204ENST00000405692 STPG4Q8N801 248 aa13.21□□□□□ -0.29
PDGFA-204ENST00000405692 PTTG1IPP53801 180 aa13.2□□□□□ -0.3
PDGFA-204ENST00000405692 GAGE2BQ13066 116 aa13.2□□□□□ -0.3
PDGFA-204ENST00000405692 PMCHL1Q16048 86 aa13.2□□□□□ -0.3
PDGFA-204ENST00000405692 NDUFA6P56556 154 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 RPL37AP61513 92 aaKnown RBP13.19□□□□□ -0.3
PDGFA-204ENST00000405692 RPL18AQ02543 176 aaKnown RBP13.19□□□□□ -0.3
PDGFA-204ENST00000405692 PDZD11Q5EBL8 140 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 C6orf226Q5I0X4 101 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 UNQ6190/PRO20217Q6UXQ8 127 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 BAGE3Q86Y29 109 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 Q8IZM0 81 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 TOMM7Q9P0U1 55 aa13.19□□□□□ -0.3
PDGFA-204ENST00000405692 TRBV30A0A0K0K1B3 111 aa13.18□□□□□ -0.3
PDGFA-204ENST00000405692 CKS1BP61024 79 aa13.18□□□□□ -0.3
PDGFA-204ENST00000405692 C7orf33Q8WU49 177 aa13.18□□□□□ -0.3
PDGFA-204ENST00000405692 IGLV5-45A0A087WSX0 123 aa13.17□□□□□ -0.3
PDGFA-204ENST00000405692 COLCA2A8K830 154 aa13.17□□□□□ -0.3
PDGFA-204ENST00000405692 H3BRM9 83 aa13.16□□□□□ -0.3
PDGFA-204ENST00000405692 HSBP1O75506 76 aa13.16□□□□□ -0.3
PDGFA-204ENST00000405692 TLX1NBP0CAT3 122 aa13.16□□□□□ -0.3
PDGFA-204ENST00000405692 C10orf25Q5T742 122 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms