RNA–Protein interactions for RNA: ENST00000402434.6

RTN4-207, Transcript of reticulon 4, humanhuman

TSL 5 BASIC

Gene RTN4, Length 1,456 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-207ENST00000402434 DNAH8Q96JB1 4490 aa12.32□□□□□ -0.44
RTN4-207ENST00000402434 LINC00173Q6ZV60 143 aa12.32□□□□□ -0.44
RTN4-207ENST00000402434 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
RTN4-207ENST00000402434 ZNF561-AS1K7EIQ3 104 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 LINC00242Q5T6M2 205 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 Q6ZN92 141 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 LINC00526Q96FQ7 95 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 TIMM17AQ99595 171 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 VCX2Q9H322 139 aa12.31□□□□□ -0.44
RTN4-207ENST00000402434 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
RTN4-207ENST00000402434 CIRBPQ14011 172 aaKnown RBP12.3□□□□□ -0.44
RTN4-207ENST00000402434 Q5VSD8 79 aa12.3□□□□□ -0.44
RTN4-207ENST00000402434 SMCO4Q9NRQ5 59 aa12.3□□□□□ -0.44
RTN4-207ENST00000402434 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.3□□□□□ -0.44
RTN4-207ENST00000402434 PANO1I0J062 215 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 APOMO95445 188 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 UBE2D1P51668 147 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 PAPPA-AS1Q5QFB9 102 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 ERASQ7Z444 233 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 C18orf32Q8TCD1 76 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 ABCA13Q86UQ4 5058 aa12.29□□□□□ -0.44
RTN4-207ENST00000402434 FAM229AH3BQW9 127 aa12.28□□□□□ -0.44
RTN4-207ENST00000402434 ZC2HC1BQ5TFG8 222 aa12.28□□□□□ -0.44
RTN4-207ENST00000402434 FA2HQ7L5A8 372 aa12.28□□□□□ -0.44
RTN4-207ENST00000402434 CBLN2Q8IUK8 224 aa12.28□□□□□ -0.44
RTN4-207ENST00000402434 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
RTN4-207ENST00000402434 FAM19A3Q7Z5A8 133 aa12.27□□□□□ -0.44
RTN4-207ENST00000402434 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 A0A087WZ39 114 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 COX6A2Q02221 97 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 SYCNQ0VAF6 134 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 OR10D4PQ8NGN7 298 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 CARD19Q96LW7 228 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 SCGB3A1Q96QR1 104 aa12.27□□□□□ -0.45
RTN4-207ENST00000402434 URB1-AS1Q96HZ7 61 aa12.26□□□□□ -0.45
RTN4-207ENST00000402434 C2orf48Q96LS8 159 aa12.26□□□□□ -0.45
RTN4-207ENST00000402434 LINC00614P0C842 121 aa12.24□□□□□ -0.45
RTN4-207ENST00000402434 LINC00528Q8N1L1 170 aa12.24□□□□□ -0.45
RTN4-207ENST00000402434 CHTF8P0CG12 524 aa12.23□□□□□ -0.45
RTN4-207ENST00000402434 SPAG11BQ08648 103 aa12.23□□□□□ -0.45
RTN4-207ENST00000402434 LINC01561Q8N1V8 128 aa12.23□□□□□ -0.45
RTN4-207ENST00000402434 SPACA4Q8TDM5 124 aa12.23□□□□□ -0.45
RTN4-207ENST00000402434 ORAOV1Q8WV07 137 aa12.23□□□□□ -0.45
RTN4-207ENST00000402434 SRRM2Q9UQ35 2752 aaKnown RBP12.23□□□□□ -0.45
RTN4-207ENST00000402434 A0A096LNJ9 63 aa12.22□□□□□ -0.45
RTN4-207ENST00000402434 Q6ZRU5 148 aa12.22□□□□□ -0.45
RTN4-207ENST00000402434 CAMK2N2Q96S95 79 aa12.22□□□□□ -0.45
RTN4-207ENST00000402434 PKIGQ9Y2B9 76 aa12.22□□□□□ -0.45
RTN4-207ENST00000402434 FAT1Q14517 4588 aa12.22□□□□□ -0.45
RTN4-207ENST00000402434 F8WDY8 70 aa12.21□□□□□ -0.45
RTN4-207ENST00000402434 SEC11AP67812 179 aa12.21□□□□□ -0.45
RTN4-207ENST00000402434 RAB5BP61020 215 aa12.21□□□□□ -0.46
RTN4-207ENST00000402434 VPS13BQ7Z7G8 4022 aa12.2□□□□□ -0.46
RTN4-207ENST00000402434 A0A087WYN8 130 aa12.2□□□□□ -0.46
RTN4-207ENST00000402434 HERVK_113P63121 156 aa12.2□□□□□ -0.46
RTN4-207ENST00000402434 A0A096LNI7 61 aa12.19□□□□□ -0.46
RTN4-207ENST00000402434 PLA2G1BP04054 148 aaKnown RBP12.19□□□□□ -0.46
RTN4-207ENST00000402434 KIAA0087Q14695 138 aa12.19□□□□□ -0.46
RTN4-207ENST00000402434 DPH3Q96FX2 82 aa12.19□□□□□ -0.46
RTN4-207ENST00000402434 CST9LQ9H4G1 147 aa12.19□□□□□ -0.46
RTN4-207ENST00000402434 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.18□□□□□ -0.46
RTN4-207ENST00000402434 RNF151Q2KHN1 245 aa12.18□□□□□ -0.46
RTN4-207ENST00000402434 PLAC8Q9NZF1 115 aa12.18□□□□□ -0.46
RTN4-207ENST00000402434 LINC00474Q9P2X8 69 aa12.18□□□□□ -0.46
RTN4-207ENST00000402434 IGKV2-24A0A0C4DH68 120 aa12.17□□□□□ -0.46
RTN4-207ENST00000402434 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
RTN4-207ENST00000402434 PMVKQ15126 192 aa12.17□□□□□ -0.46
RTN4-207ENST00000402434 MRPL35Q9NZE8 188 aaKnown RBP12.17□□□□□ -0.46
RTN4-207ENST00000402434 CDKN2A-AS1Q9UH64 79 aa12.17□□□□□ -0.46
RTN4-207ENST00000402434 HBDP02042 147 aa12.16□□□□□ -0.46
RTN4-207ENST00000402434 GEMIN7Q9H840 131 aaKnown RBP12.16□□□□□ -0.46
RTN4-207ENST00000402434 LOC107984640A0A0U1RRK4 108 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 NDUFA1O15239 70 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 INAFM2P0DMQ5 153 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 KRTAP10-4P60372 401 aaPredicted RBP12.15□□□□□ -0.46
RTN4-207ENST00000402434 PMCHL1Q16048 86 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 MAJINQ3KP22 176 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 PDZD11Q5EBL8 140 aa12.15□□□□□ -0.46
RTN4-207ENST00000402434 COLCA2A8K830 154 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 TRGC2P03986 189 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 C10orf25Q5T742 122 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 UNQ6190/PRO20217Q6UXQ8 127 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 CHCHD1Q96BP2 118 aaKnown RBP12.14□□□□□ -0.47
RTN4-207ENST00000402434 IGLV5-45A0A087WSX0 123 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 PTTG1IPP53801 180 aa12.14□□□□□ -0.47
RTN4-207ENST00000402434 STPG4Q8N801 248 aa12.13□□□□□ -0.47
RTN4-207ENST00000402434 FLG2Q5D862 2391 aaPredicted RBP12.12□□□□□ -0.47
RTN4-207ENST00000402434 ATP5LO75964 103 aa12.11□□□□□ -0.47
RTN4-207ENST00000402434 Q8IZM0 81 aa12.11□□□□□ -0.47
RTN4-207ENST00000402434 LINC00469Q8N7U9 141 aa12.11□□□□□ -0.47
RTN4-207ENST00000402434 C6orf48Q9UBA6 75 aa12.11□□□□□ -0.47
RTN4-207ENST00000402434 GAGE2BQ13066 116 aa12.1□□□□□ -0.47
RTN4-207ENST00000402434 C2orf82Q6UX34 121 aa12.1□□□□□ -0.47
RTN4-207ENST00000402434 PACRGQ96M98 296 aaPredicted RBP12.1□□□□□ -0.47
RTN4-207ENST00000402434 TRBV30A0A0K0K1B3 111 aa12.09□□□□□ -0.47
RTN4-207ENST00000402434 TLX1NBP0CAT3 122 aa12.09□□□□□ -0.47
RTN4-207ENST00000402434 SMIM1B2RUZ4 78 aa12.08□□□□□ -0.47
RTN4-207ENST00000402434 PRSS2P07478 247 aa12.08□□□□□ -0.47
RTN4-207ENST00000402434 RPL37AP61513 92 aaKnown RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 319 ms