RNA–Protein interactions for RNA: ENST00000402255.5

APOBEC3A-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene APOBEC3A, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-202ENST00000402255 Q6ZN92 141 aa10.2□□□□□ -0.78
APOBEC3A-202ENST00000402255 VCX2Q9H322 139 aa10.2□□□□□ -0.78
APOBEC3A-202ENST00000402255 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 NDUFA6P56556 154 aa10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 FOXI1Q12951 378 aa10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 COA6Q5JTJ3 125 aaKnown RBP10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 PKHD1P08F94 4074 aa10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 DYNC1H1Q14204 4646 aaKnown RBP10.19□□□□□ -0.78
APOBEC3A-202ENST00000402255 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.18□□□□□ -0.78
APOBEC3A-202ENST00000402255 UBE2D1P51668 147 aa10.18□□□□□ -0.78
APOBEC3A-202ENST00000402255 USP17L23D6RBM5 183 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 PAPPA-AS1Q5QFB9 102 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 C2orf88Q9BSF0 95 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 ATP5LO75964 103 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 FUSP35637 526 aaKnown RBP eCLIP10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 CD164L2Q6UWJ8 174 aa10.17□□□□□ -0.78
APOBEC3A-202ENST00000402255 COX6A2Q02221 97 aa10.16□□□□□ -0.78
APOBEC3A-202ENST00000402255 PMVKQ15126 192 aa10.16□□□□□ -0.78
APOBEC3A-202ENST00000402255 FAM19A3Q7Z5A8 133 aa10.16□□□□□ -0.78
APOBEC3A-202ENST00000402255 CST9LQ9H4G1 147 aa10.16□□□□□ -0.78
APOBEC3A-202ENST00000402255 GCSHP23434 173 aa10.15□□□□□ -0.78
APOBEC3A-202ENST00000402255 IFI27L1Q96BM0 104 aa10.15□□□□□ -0.78
APOBEC3A-202ENST00000402255 A0A0J9YXV3 536 aa10.14□□□□□ -0.79
APOBEC3A-202ENST00000402255 LEPROTL1O95214 131 aa10.14□□□□□ -0.79
APOBEC3A-202ENST00000402255 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
APOBEC3A-202ENST00000402255 BIRC6Q9NR09 4857 aa10.14□□□□□ -0.79
APOBEC3A-202ENST00000402255 IGHV3OR16-9A0A0B4J2B5 98 aa10.13□□□□□ -0.79
APOBEC3A-202ENST00000402255 FABP4P15090 132 aa10.13□□□□□ -0.79
APOBEC3A-202ENST00000402255 C5orf38Q86SI9 138 aa10.13□□□□□ -0.79
APOBEC3A-202ENST00000402255 C15orf56Q8N910 161 aa10.13□□□□□ -0.79
APOBEC3A-202ENST00000402255 LRP1BQ9NZR2 4599 aa10.12□□□□□ -0.79
APOBEC3A-202ENST00000402255 DNAH8Q96JB1 4490 aa10.11□□□□□ -0.79
APOBEC3A-202ENST00000402255 IGLV4-69A0A075B6H9 119 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 hDV102S1A0JD36 115 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 COX7A2LO14548 114 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 CDK2AP2O75956 126 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 PRSS1P07477 247 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 HSPB8Q9UJY1 196 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 TRAV12-1A0A0B4J245 112 aa10.1□□□□□ -0.79
APOBEC3A-202ENST00000402255 A0A087WZ39 114 aa10.09□□□□□ -0.79
APOBEC3A-202ENST00000402255 TINCRA0A1B0GVN0 87 aa10.09□□□□□ -0.79
APOBEC3A-202ENST00000402255 IGLC3P0DOY3 106 aa10.09□□□□□ -0.79
APOBEC3A-202ENST00000402255 KRTAP10-1P60331 282 aa10.09□□□□□ -0.79
APOBEC3A-202ENST00000402255 HERVK_113P63121 156 aa10.09□□□□□ -0.79
APOBEC3A-202ENST00000402255 IGLV5-45A0A087WSX0 123 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 H0Y8G0 127 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 MALP21145 153 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 SEC11AP67812 179 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 PACRGQ96M98 296 aaPredicted RBP10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 GEMIN7Q9H840 131 aaKnown RBP10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 CDKN2A-AS1Q9UH64 79 aa10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 CHTOPQ9Y3Y2 248 aaKnown RBP10.08□□□□□ -0.8
APOBEC3A-202ENST00000402255 GVQW2A0A096LPI5 108 aaPredicted RBP10.07□□□□□ -0.8
APOBEC3A-202ENST00000402255 CHAC1Q9BUX1 264 aa10.07□□□□□ -0.8
APOBEC3A-202ENST00000402255 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.06□□□□□ -0.8
APOBEC3A-202ENST00000402255 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
APOBEC3A-202ENST00000402255 S100A6P06703 90 aa10.06□□□□□ -0.8
APOBEC3A-202ENST00000402255 ODF1Q14990 250 aa10.06□□□□□ -0.8
APOBEC3A-202ENST00000402255 MRPL35Q9NZE8 188 aaKnown RBP10.06□□□□□ -0.8
APOBEC3A-202ENST00000402255 IGHV3-64A0A075B6Q5 118 aa10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 F8VRH5 84 aa10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 SLPIP03973 132 aa10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 CNBPP62633 177 aaKnown RBP10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 LINC00469Q8N7U9 141 aa10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 LINC00526Q96FQ7 95 aa10.05□□□□□ -0.8
APOBEC3A-202ENST00000402255 APOMO95445 188 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 ZNF22P17026 224 aaPredicted RBP10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 SNRPEP62304 92 aaKnown RBP10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 LINC01561Q8N1V8 128 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 MAP1LC3CQ9BXW4 147 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 C5orf52A6NGY3 159 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 ORAOV1Q8WV07 137 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 HIST1H2BLQ99880 126 aa10.04□□□□□ -0.8
APOBEC3A-202ENST00000402255 SYS1-DBNDD2H3BUS1 97 aa10.03□□□□□ -0.8
APOBEC3A-202ENST00000402255 ZNF561-AS1K7EIQ3 104 aa10.03□□□□□ -0.8
APOBEC3A-202ENST00000402255 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
APOBEC3A-202ENST00000402255 C9orf163Q8N9P6 203 aa10.03□□□□□ -0.8
APOBEC3A-202ENST00000402255 PMCHL2Q9BQD1 86 aa10.03□□□□□ -0.8
APOBEC3A-202ENST00000402255 APOBP04114 4563 aaKnown RBP10.02□□□□□ -0.81
APOBEC3A-202ENST00000402255 SMIM1B2RUZ4 78 aa10.02□□□□□ -0.81
APOBEC3A-202ENST00000402255 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
APOBEC3A-202ENST00000402255 SPAG11BQ08648 103 aa10.02□□□□□ -0.81
APOBEC3A-202ENST00000402255 OR10D4PQ8NGN7 298 aa10.02□□□□□ -0.81
APOBEC3A-202ENST00000402255 SPINK8P0C7L1 97 aa10.01□□□□□ -0.81
APOBEC3A-202ENST00000402255 KIAA0087Q14695 138 aa10.01□□□□□ -0.81
APOBEC3A-202ENST00000402255 S100A2P29034 98 aa10□□□□□ -0.81
APOBEC3A-202ENST00000402255 LORP23490 312 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3A-202ENST00000402255 KRTDAPP60985 99 aa9.99□□□□□ -0.81
APOBEC3A-202ENST00000402255 TMEM170BQ5T4T1 132 aa9.99□□□□□ -0.81
APOBEC3A-202ENST00000402255 TMA7Q9Y2S6 64 aaKnown RBP9.99□□□□□ -0.81
APOBEC3A-202ENST00000402255 H3BRM9 83 aa9.98□□□□□ -0.81
APOBEC3A-202ENST00000402255 LINC01545Q5VT33 79 aa9.98□□□□□ -0.81
APOBEC3A-202ENST00000402255 PET117Q6UWS5 81 aa9.98□□□□□ -0.81
APOBEC3A-202ENST00000402255 Q6ZSA8 131 aa9.98□□□□□ -0.81
APOBEC3A-202ENST00000402255 TMEM223A0PJW6 202 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms