RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

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Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 CDIP1Q9H305 208 aa11.35□□□□□ -0.59
CHRFAM7A-203ENST00000401522 TRBV10-1A0A0K0K1A3 114 aa11.34□□□□□ -0.59
CHRFAM7A-203ENST00000401522 TRGV1A0A0A0MS02 117 aa11.33□□□□□ -0.6
CHRFAM7A-203ENST00000401522 C9JAW5 83 aa11.33□□□□□ -0.6
CHRFAM7A-203ENST00000401522 NDUFA1O15239 70 aa11.33□□□□□ -0.6
CHRFAM7A-203ENST00000401522 IFITM1P13164 125 aa11.33□□□□□ -0.6
CHRFAM7A-203ENST00000401522 CDKN2A-AS1Q9UH64 79 aa11.33□□□□□ -0.6
CHRFAM7A-203ENST00000401522 IGHV3OR16-12A0A075B7B8 117 aa11.32□□□□□ -0.6
CHRFAM7A-203ENST00000401522 HERVK_113P63121 156 aa11.32□□□□□ -0.6
CHRFAM7A-203ENST00000401522 RPL36AP83881 106 aaKnown RBP11.32□□□□□ -0.6
CHRFAM7A-203ENST00000401522 RPL36ALQ969Q0 106 aaKnown RBP11.32□□□□□ -0.6
CHRFAM7A-203ENST00000401522 LINC01600Q96MT4 127 aa11.32□□□□□ -0.6
CHRFAM7A-203ENST00000401522 A8MZ25 164 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 K7EQD1 137 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 DAZ2Q13117 558 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 LINC01620Q4KN68 170 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 FAM19A3Q7Z5A8 133 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 DAZ4Q86SG3 579 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 DAZ3Q9NR90 486 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 CSDC2Q9Y534 153 aaKnown RBP11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 TRAV4A0A0B4J268 109 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 TRIAP1O43715 76 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 TMEM101Q96IK0 257 aa11.31□□□□□ -0.6
CHRFAM7A-203ENST00000401522 DNAH3Q8TD57 4116 aa11.3□□□□□ -0.6
CHRFAM7A-203ENST00000401522 IGLV5-39A0A0G2JS06 123 aa11.3□□□□□ -0.6
CHRFAM7A-203ENST00000401522 IGHV4-30-4P0DP06 118 aa11.3□□□□□ -0.6
CHRFAM7A-203ENST00000401522 ICOSQ9Y6W8 199 aa11.3□□□□□ -0.6
CHRFAM7A-203ENST00000401522 CIRBPQ14011 172 aaKnown RBP11.29□□□□□ -0.6
CHRFAM7A-203ENST00000401522 TMEM262E9PQX1 116 aa11.29□□□□□ -0.6
CHRFAM7A-203ENST00000401522 PRB2P02812 416 aaPredicted RBP11.28□□□□□ -0.6
CHRFAM7A-203ENST00000401522 COX6CP09669 75 aa11.28□□□□□ -0.6
CHRFAM7A-203ENST00000401522 LINC00242Q5T6M2 205 aa11.28□□□□□ -0.6
CHRFAM7A-203ENST00000401522 Q6ZTI0 123 aa11.28□□□□□ -0.6
CHRFAM7A-203ENST00000401522 TRBV10-2A0A0K0K1G8 114 aa11.27□□□□□ -0.6
CHRFAM7A-203ENST00000401522 COX6A2Q02221 97 aa11.27□□□□□ -0.6
CHRFAM7A-203ENST00000401522 K7EIL1 84 aa11.27□□□□□ -0.61
CHRFAM7A-203ENST00000401522 RPL35AP18077 110 aaKnown RBP11.27□□□□□ -0.61
CHRFAM7A-203ENST00000401522 LINC00694P0DN24 101 aa11.26□□□□□ -0.61
CHRFAM7A-203ENST00000401522 COPS9Q8WXC6 57 aa11.26□□□□□ -0.61
CHRFAM7A-203ENST00000401522 NPC2P61916 151 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 NTM-AS1Q6ZSK4 140 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 KIR2DL5BQ8NHK3 375 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 A0A1B0GV72 72 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 RPL13AP40429 203 aaKnown RBP11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 C16orf74Q96GX8 76 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 Q9H8V8 135 aa11.25□□□□□ -0.61
CHRFAM7A-203ENST00000401522 GAGE12JA6NER3 117 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 SMIM1B2RUZ4 78 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 CIDEAO60543 219 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 MT-ATP8P03928 68 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 GIG44P09565 113 aaPredicted RBP11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 XGP55808 180 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 GAGE4Q13068 117 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 GAGE5Q13069 117 aa11.24□□□□□ -0.61
CHRFAM7A-203ENST00000401522 APOC4P55056 127 aa11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 NOP10Q9NPE3 64 aaKnown RBP11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 CDC42SE2Q9NRR3 84 aa11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 LINC00308Q8TCZ7 52 aa11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 NTN5Q8WTR8 489 aaPredicted RBP11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 TMEM243Q9BU79 118 aa11.23□□□□□ -0.61
CHRFAM7A-203ENST00000401522 TRAV13-1A0A0B4J241 112 aa11.22□□□□□ -0.61
CHRFAM7A-203ENST00000401522 H3BT86 120 aa11.22□□□□□ -0.61
CHRFAM7A-203ENST00000401522 H7C423 109 aa11.21□□□□□ -0.61
CHRFAM7A-203ENST00000401522 DAND5Q8N907 189 aa11.21□□□□□ -0.61
CHRFAM7A-203ENST00000401522 LST1O00453 97 aa11.21□□□□□ -0.62
CHRFAM7A-203ENST00000401522 UBE2L6O14933 153 aa11.21□□□□□ -0.62
CHRFAM7A-203ENST00000401522 DEFB121Q5J5C9 76 aa11.21□□□□□ -0.62
CHRFAM7A-203ENST00000401522 C2orf82Q6UX34 121 aa11.21□□□□□ -0.62
CHRFAM7A-203ENST00000401522 CSNK1G2-AS1Q8NCQ2 148 aa11.21□□□□□ -0.62
CHRFAM7A-203ENST00000401522 PLAC8L1A1L4L8 177 aa11.2□□□□□ -0.62
CHRFAM7A-203ENST00000401522 F5H768 121 aa11.2□□□□□ -0.62
CHRFAM7A-203ENST00000401522 HERV-K104P63124 156 aa11.2□□□□□ -0.62
CHRFAM7A-203ENST00000401522 ZNF625Q96I27 306 aaPredicted RBP11.2□□□□□ -0.62
CHRFAM7A-203ENST00000401522 OVOL2Q9BRP0 275 aa11.2□□□□□ -0.62
CHRFAM7A-203ENST00000401522 TRGV2A0A075B6R0 118 aa11.19□□□□□ -0.62
CHRFAM7A-203ENST00000401522 TRBV6-4A0A1B0GX49 114 aa11.19□□□□□ -0.62
CHRFAM7A-203ENST00000401522 UBE2WQ96B02 151 aa11.19□□□□□ -0.62
CHRFAM7A-203ENST00000401522 PPDPFQ9H3Y8 114 aa11.19□□□□□ -0.62
CHRFAM7A-203ENST00000401522 CKS1BP61024 79 aa11.19□□□□□ -0.62
CHRFAM7A-203ENST00000401522 GAGE7O76087 117 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 GAGE12FP0CL80 117 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 GAGE12GP0CL81 117 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 GAGE12IP0CL82 117 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 MRAPQ8TCY5 172 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 CLEC2BQ92478 149 aa11.18□□□□□ -0.62
CHRFAM7A-203ENST00000401522 TEX49A0A1B0GTD5 131 aa11.17□□□□□ -0.62
CHRFAM7A-203ENST00000401522 MEIG1Q5JSS6 88 aa11.17□□□□□ -0.62
CHRFAM7A-203ENST00000401522 MEGF8Q7Z7M0 2845 aa11.16□□□□□ -0.62
CHRFAM7A-203ENST00000401522 TRAV8-4A0A0B4J246 113 aa11.15□□□□□ -0.62
CHRFAM7A-203ENST00000401522 TRGV4A0A0C4DH28 118 aa11.15□□□□□ -0.62
CHRFAM7A-203ENST00000401522 SOSTDC1Q6X4U4 206 aa11.15□□□□□ -0.62
CHRFAM7A-203ENST00000401522 DEFB135Q30KP9 77 aa11.14□□□□□ -0.63
CHRFAM7A-203ENST00000401522 LOC100131303A0A0U1RQF7 123 aa11.13□□□□□ -0.63
CHRFAM7A-203ENST00000401522 A0A0U1RRA0 63 aa11.13□□□□□ -0.63
CHRFAM7A-203ENST00000401522 COX7A2LO14548 114 aa11.13□□□□□ -0.63
CHRFAM7A-203ENST00000401522 NBEAL2Q6ZNJ1 2754 aa11.12□□□□□ -0.63
CHRFAM7A-203ENST00000401522 FHL2Q14192 279 aa11.11□□□□□ -0.63
CHRFAM7A-203ENST00000401522 B9D2Q9BPU9 175 aa11.11□□□□□ -0.63
CHRFAM7A-203ENST00000401522 TM2D3Q9BRN9 247 aa11.11□□□□□ -0.63
CHRFAM7A-203ENST00000401522 SNCGO76070 127 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms