RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 VCYO14598 125 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 PSMB2P49721 201 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 UBE2D3P61077 147 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 UBE2D2P62837 147 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 RPL36AP83881 106 aaKnown RBP8.12□□□□□ -1.11
SKA3-203ENST00000400018 TTC32Q5I0X7 151 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 PPDPFLQ8WWR9 84 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 RPL36ALQ969Q0 106 aaKnown RBP8.12□□□□□ -1.11
SKA3-203ENST00000400018 DNAH10Q8IVF4 4471 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 HBDP02042 147 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 MEIG1Q5JSS6 88 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 CHCHD7Q9BUK0 85 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 PRO0255Q9UI72 69 aa8.12□□□□□ -1.11
SKA3-203ENST00000400018 MAPKAPK5-AS1Q8N8E1 139 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 HIST1H4GQ99525 98 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 H7C1H1 209 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 IFITM1P13164 125 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 RHOHQ15669 191 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 B9D2Q9BPU9 175 aa8.11□□□□□ -1.11
SKA3-203ENST00000400018 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 CSDC2Q9Y534 153 aaKnown RBP8.1□□□□□ -1.11
SKA3-203ENST00000400018 LOC107984156A0A0G2JMH3 177 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 TRBV6-5A0A0K0K1A5 114 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 TEN1Q86WV5 123 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 ARL17AQ8IVW1 177 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 FAM104AQ969W3 186 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 SCGB3A1Q96QR1 104 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 PRADC1Q9BSG0 188 aa8.1□□□□□ -1.11
SKA3-203ENST00000400018 PRSS1P07477 247 aa8.09□□□□□ -1.11
SKA3-203ENST00000400018 KMT2AQ03164 3969 aa8.09□□□□□ -1.11
SKA3-203ENST00000400018 SNCGO76070 127 aa8.09□□□□□ -1.11
SKA3-203ENST00000400018 IGLV4-60A0A075B6I1 120 aa8.09□□□□□ -1.12
SKA3-203ENST00000400018 C5orf47Q569G3 176 aa8.09□□□□□ -1.12
SKA3-203ENST00000400018 PIK3CD-AS1Q5SR53 167 aa8.09□□□□□ -1.12
SKA3-203ENST00000400018 CHCHD5Q9BSY4 110 aa8.09□□□□□ -1.12
SKA3-203ENST00000400018 TMEM262E9PQX1 116 aa8.08□□□□□ -1.12
SKA3-203ENST00000400018 C20orf203Q8NBC4 194 aa8.08□□□□□ -1.12
SKA3-203ENST00000400018 C11orf68Q9H3H3 251 aaKnown RBP8.07□□□□□ -1.12
SKA3-203ENST00000400018 IGKCP01834 107 aa8.07□□□□□ -1.12
SKA3-203ENST00000400018 ANKRD29Q8N6D5 301 aa8.07□□□□□ -1.12
SKA3-203ENST00000400018 TOMM6Q96B49 74 aa8.07□□□□□ -1.12
SKA3-203ENST00000400018 DNAH1Q9P2D7 4330 aa8.07□□□□□ -1.12
SKA3-203ENST00000400018 IGHV3-64A0A075B6Q5 118 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 LOC107984640A0A0U1RRK4 108 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 LINC01549A6NIU2 74 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 BAALCQ8WXS3 180 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 ORMDL2Q53FV1 153 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 EDA2RQ9HAV5 297 aa8.06□□□□□ -1.12
SKA3-203ENST00000400018 MRPL35Q9NZE8 188 aaKnown RBP8.06□□□□□ -1.12
SKA3-203ENST00000400018 IGHV3-30P01768 117 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 IGHV3-33P01772 117 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 IGHV3-30-3P0DP02 117 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 IGHV3-30-5P0DP03 117 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 ESRGQ1W209 222 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 WFDC10BQ8IUB3 73 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 VCX2Q9H322 139 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 IGIPA6NJ69 53 aa8.05□□□□□ -1.12
SKA3-203ENST00000400018 IGLV10-54A0A075B6I4 117 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 TRBV6-8A0A0A6YYG3 113 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 TRAV13-1A0A0B4J241 112 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 TRBV10-1A0A0K0K1A3 114 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 LINC01546A6NGU7 62 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 PPP1R17O96001 155 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 TAL2Q16559 108 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 UBE2D4Q9Y2X8 147 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 IGLV4-3A0A075B6K6 122 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 A4D1N5 150 aa8.04□□□□□ -1.12
SKA3-203ENST00000400018 DAZ4Q86SG3 579 aaKnown RBP8.04□□□□□ -1.12
SKA3-203ENST00000400018 DAZ3Q9NR90 486 aaKnown RBP8.04□□□□□ -1.12
SKA3-203ENST00000400018 MRPL23Q16540 153 aaKnown RBP8.03□□□□□ -1.12
SKA3-203ENST00000400018 A0A0J9YXV3 536 aa8.03□□□□□ -1.12
SKA3-203ENST00000400018 TCL1BO95988 128 aa8.03□□□□□ -1.12
SKA3-203ENST00000400018 LYPD5Q6UWN5 251 aa8.03□□□□□ -1.12
SKA3-203ENST00000400018 UBE2L6O14933 153 aa8.02□□□□□ -1.13
SKA3-203ENST00000400018 DPM2O94777 84 aa8.02□□□□□ -1.13
SKA3-203ENST00000400018 TMEM243Q9BU79 118 aa8.02□□□□□ -1.13
SKA3-203ENST00000400018 ICOSQ9Y6W8 199 aa8.02□□□□□ -1.13
SKA3-203ENST00000400018 MYMXA0A1B0GTQ4 84 aa8.01□□□□□ -1.13
SKA3-203ENST00000400018 DGAT2L7PQ6IED9 249 aa8.01□□□□□ -1.13
SKA3-203ENST00000400018 COX6A2Q02221 97 aa8.01□□□□□ -1.13
SKA3-203ENST00000400018 TMEM126AQ9H061 195 aa8.01□□□□□ -1.13
SKA3-203ENST00000400018 HYDINQ4G0P3 5121 aa8□□□□□ -1.13
SKA3-203ENST00000400018 C11orf86A6NJI1 115 aa8□□□□□ -1.13
SKA3-203ENST00000400018 C15orf53Q8NAA6 179 aa8□□□□□ -1.13
SKA3-203ENST00000400018 TRAV10A0A0B4J240 114 aa7.99□□□□□ -1.13
SKA3-203ENST00000400018 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
SKA3-203ENST00000400018 LINC00269Q8N2A0 174 aa7.99□□□□□ -1.13
SKA3-203ENST00000400018 Q6Q795 121 aa7.99□□□□□ -1.13
SKA3-203ENST00000400018 KLK12Q9UKR0 248 aa7.99□□□□□ -1.13
SKA3-203ENST00000400018 IGLV4-69A0A075B6H9 119 aa7.98□□□□□ -1.13
SKA3-203ENST00000400018 ANGP03950 147 aaKnown RBP7.98□□□□□ -1.13
SKA3-203ENST00000400018 SCGB1C2P0DMR2 95 aa7.98□□□□□ -1.13
SKA3-203ENST00000400018 FAM19A5Q7Z5A7 132 aaPredicted RBP7.98□□□□□ -1.13
SKA3-203ENST00000400018 DYNC2H1Q8NCM8 4307 aaKnown RBP7.98□□□□□ -1.13
SKA3-203ENST00000400018 TMEM141Q96I45 108 aa7.98□□□□□ -1.13
SKA3-203ENST00000400018 LINC00588Q9Y4M8 146 aa7.98□□□□□ -1.13
SKA3-203ENST00000400018 TRAV8-3A0A0A6YYJ7 113 aa7.97□□□□□ -1.13
SKA3-203ENST00000400018 C9JAW5 83 aa7.97□□□□□ -1.13
SKA3-203ENST00000400018 SLC25A20O43772 301 aa7.97□□□□□ -1.13
SKA3-203ENST00000400018 ATP5LO75964 103 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms