RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 LINC00614P0C842 121 aa13.71□□□□□ -0.22
TSPAN4-206ENST00000397408 HAMPP81172 84 aa13.71□□□□□ -0.22
TSPAN4-206ENST00000397408 PAPPA-AS1Q5QFB9 102 aa13.71□□□□□ -0.22
TSPAN4-206ENST00000397408 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.7□□□□□ -0.22
TSPAN4-206ENST00000397408 IGHV3OR16-9A0A0B4J2B5 98 aa13.7□□□□□ -0.22
TSPAN4-206ENST00000397408 UBE2D1P51668 147 aa13.7□□□□□ -0.22
TSPAN4-206ENST00000397408 LINC00242Q5T6M2 205 aa13.7□□□□□ -0.22
TSPAN4-206ENST00000397408 Q6ZSA8 131 aa13.7□□□□□ -0.22
TSPAN4-206ENST00000397408 SCO1O75880 301 aa13.69□□□□□ -0.22
TSPAN4-206ENST00000397408 TRGC2P03986 189 aa13.69□□□□□ -0.22
TSPAN4-206ENST00000397408 RAB5BP61020 215 aa13.69□□□□□ -0.22
TSPAN4-206ENST00000397408 LINC00526Q96FQ7 95 aa13.69□□□□□ -0.22
TSPAN4-206ENST00000397408 COLCA2A8K830 154 aa13.68□□□□□ -0.22
TSPAN4-206ENST00000397408 DNAH8Q96JB1 4490 aa13.67□□□□□ -0.22
TSPAN4-206ENST00000397408 A0A096LNJ9 63 aa13.67□□□□□ -0.22
TSPAN4-206ENST00000397408 ZNF561-AS1K7EIQ3 104 aa13.67□□□□□ -0.22
TSPAN4-206ENST00000397408 APOMO95445 188 aa13.67□□□□□ -0.22
TSPAN4-206ENST00000397408 COX6A2Q02221 97 aa13.66□□□□□ -0.22
TSPAN4-206ENST00000397408 PMCHL1Q16048 86 aa13.66□□□□□ -0.22
TSPAN4-206ENST00000397408 IGHV3-64A0A075B6Q5 118 aa13.65□□□□□ -0.22
TSPAN4-206ENST00000397408 HBDP02042 147 aa13.65□□□□□ -0.22
TSPAN4-206ENST00000397408 IGLV4-69A0A075B6H9 119 aa13.64□□□□□ -0.23
TSPAN4-206ENST00000397408 SPAG11BQ08648 103 aa13.64□□□□□ -0.23
TSPAN4-206ENST00000397408 SDIM1Q6ZPB5 146 aa13.64□□□□□ -0.23
TSPAN4-206ENST00000397408 ORAOV1Q8WV07 137 aa13.64□□□□□ -0.23
TSPAN4-206ENST00000397408 A0A087WZ39 114 aa13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 FAM19A3Q7Z5A8 133 aa13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 CHCHD1Q96BP2 118 aaKnown RBP13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 CARD19Q96LW7 228 aa13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 KRTAP17-1Q9BYP8 105 aa13.63□□□□□ -0.23
TSPAN4-206ENST00000397408 OR10D4PQ8NGN7 298 aa13.62□□□□□ -0.23
TSPAN4-206ENST00000397408 SEC11AP67812 179 aa13.61□□□□□ -0.23
TSPAN4-206ENST00000397408 SYCNQ0VAF6 134 aa13.61□□□□□ -0.23
TSPAN4-206ENST00000397408 SCXQ7RTU7 201 aa13.61□□□□□ -0.23
TSPAN4-206ENST00000397408 BAGE3Q86Y29 109 aa13.61□□□□□ -0.23
TSPAN4-206ENST00000397408 A0A0J9YXV3 536 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 HERVK_113P63121 156 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 PDZD11Q5EBL8 140 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 Q8N1X5 172 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 CAMK2N2Q96S95 79 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 CHAC1Q9BUX1 264 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 CST9LQ9H4G1 147 aa13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 GEMIN7Q9H840 131 aaKnown RBP13.6□□□□□ -0.23
TSPAN4-206ENST00000397408 PMVKQ15126 192 aa13.59□□□□□ -0.23
TSPAN4-206ENST00000397408 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.59□□□□□ -0.23
TSPAN4-206ENST00000397408 SMR3BP02814 79 aaPredicted RBP13.58□□□□□ -0.24
TSPAN4-206ENST00000397408 Q6ZRU5 148 aa13.58□□□□□ -0.24
TSPAN4-206ENST00000397408 C2orf48Q96LS8 159 aa13.58□□□□□ -0.24
TSPAN4-206ENST00000397408 PANO1I0J062 215 aa13.57□□□□□ -0.24
TSPAN4-206ENST00000397408 LINC01561Q8N1V8 128 aa13.57□□□□□ -0.24
TSPAN4-206ENST00000397408 ATP5LO75964 103 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 CHTF8P0CG12 524 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 NDUFA6P56556 154 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 CIRBP-AS1Q8TBR5 109 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 CDKN2A-AS1Q9UH64 79 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 HSBP1O75506 76 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 LINC00469Q8N7U9 141 aa13.56□□□□□ -0.24
TSPAN4-206ENST00000397408 TINCRA0A1B0GVN0 87 aa13.55□□□□□ -0.24
TSPAN4-206ENST00000397408 SERF1AO75920 110 aa13.54□□□□□ -0.24
TSPAN4-206ENST00000397408 PACRGQ96M98 296 aaPredicted RBP13.54□□□□□ -0.24
TSPAN4-206ENST00000397408 KRTAP4-5Q9BYR2 181 aa13.54□□□□□ -0.24
TSPAN4-206ENST00000397408 LINC00310P59036 64 aa13.53□□□□□ -0.24
TSPAN4-206ENST00000397408 CIRBPQ14011 172 aaKnown RBP13.53□□□□□ -0.24
TSPAN4-206ENST00000397408 FAM19A2Q8N3H0 131 aa13.53□□□□□ -0.24
TSPAN4-206ENST00000397408 PKIGQ9Y2B9 76 aa13.53□□□□□ -0.24
TSPAN4-206ENST00000397408 IGKV2-24A0A0C4DH68 120 aa13.52□□□□□ -0.25
TSPAN4-206ENST00000397408 NDUFA1O15239 70 aa13.52□□□□□ -0.25
TSPAN4-206ENST00000397408 KIAA0087Q14695 138 aa13.52□□□□□ -0.25
TSPAN4-206ENST00000397408 SPACA4Q8TDM5 124 aa13.52□□□□□ -0.25
TSPAN4-206ENST00000397408 FAT1Q14517 4588 aa13.52□□□□□ -0.25
TSPAN4-206ENST00000397408 IGLV5-45A0A087WSX0 123 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 A0A096LNI7 61 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 F8WDY8 70 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 ATP6V1G1O75348 118 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 Q5VSD8 79 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 TOMM7Q9P0U1 55 aa13.51□□□□□ -0.25
TSPAN4-206ENST00000397408 EPM2AB3EWF7 344 aa13.5□□□□□ -0.25
TSPAN4-206ENST00000397408 MRPL35Q9NZE8 188 aaKnown RBP13.5□□□□□ -0.25
TSPAN4-206ENST00000397408 PRSS2P07478 247 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 IGLC3P0DOY3 106 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 S100A1P23297 94 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 C10orf25Q5T742 122 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 UNQ6190/PRO20217Q6UXQ8 127 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 IFI27L1Q96BM0 104 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 DPH3Q96FX2 82 aa13.49□□□□□ -0.25
TSPAN4-206ENST00000397408 LOC107984640A0A0U1RRK4 108 aa13.48□□□□□ -0.25
TSPAN4-206ENST00000397408 MAJINQ3KP22 176 aa13.48□□□□□ -0.25
TSPAN4-206ENST00000397408 LINC00528Q8N1L1 170 aa13.48□□□□□ -0.25
TSPAN4-206ENST00000397408 SMIM1B2RUZ4 78 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 RNF151Q2KHN1 245 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 C2orf82Q6UX34 121 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 Q8IZM0 81 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 A0A087WYN8 130 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 FAM229AH3BQW9 127 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 NUPR1O60356 82 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 C6orf48Q9UBA6 75 aa13.47□□□□□ -0.25
TSPAN4-206ENST00000397408 ABCA13Q86UQ4 5058 aa13.46□□□□□ -0.25
TSPAN4-206ENST00000397408 HIST1H2BKO60814 126 aa13.46□□□□□ -0.26
TSPAN4-206ENST00000397408 HIST1H2BJP06899 126 aa13.46□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms