RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 A0A087X002 238 aa8.78□□□□□ -1
SEC13-206ENST00000397102 CT83Q5H943 113 aa8.78□□□□□ -1
SEC13-206ENST00000397102 FAM231DQ6ZW35 169 aa8.78□□□□□ -1
SEC13-206ENST00000397102 AMN1Q8IY45 258 aa8.78□□□□□ -1
SEC13-206ENST00000397102 A0A1B0GUT8 65 aa8.77□□□□□ -1.01
SEC13-206ENST00000397102 NUPR1O60356 82 aa8.77□□□□□ -1.01
SEC13-206ENST00000397102 PPP1R17O96001 155 aa8.77□□□□□ -1.01
SEC13-206ENST00000397102 TAGLN2P37802 199 aaKnown RBP8.77□□□□□ -1.01
SEC13-206ENST00000397102 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
SEC13-206ENST00000397102 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
SEC13-206ENST00000397102 TYMSOSQ8TAI1 123 aa8.77□□□□□ -1.01
SEC13-206ENST00000397102 CDIP1Q9H305 208 aa8.77□□□□□ -1.01
SEC13-206ENST00000397102 TRBV30A0A0K0K1B3 111 aa8.76□□□□□ -1.01
SEC13-206ENST00000397102 NDUFC2-KCTD14E9PQ53 114 aa8.76□□□□□ -1.01
SEC13-206ENST00000397102 SMKR1H3BMG3 65 aa8.76□□□□□ -1.01
SEC13-206ENST00000397102 CRYGAP11844 174 aa8.76□□□□□ -1.01
SEC13-206ENST00000397102 NRACQ8N912 160 aa8.76□□□□□ -1.01
SEC13-206ENST00000397102 KIAA0087Q14695 138 aa8.75□□□□□ -1.01
SEC13-206ENST00000397102 TPRXLQ17RH7 258 aa8.75□□□□□ -1.01
SEC13-206ENST00000397102 HIGD1CA8MV81 97 aa8.74□□□□□ -1.01
SEC13-206ENST00000397102 PPP1R2P9O14990 202 aa8.74□□□□□ -1.01
SEC13-206ENST00000397102 FAM104AQ969W3 186 aa8.74□□□□□ -1.01
SEC13-206ENST00000397102 RETNLBQ9BQ08 111 aa8.74□□□□□ -1.01
SEC13-206ENST00000397102 RPL39P62891 51 aaKnown RBP8.73□□□□□ -1.01
SEC13-206ENST00000397102 CTDSP1Q9GZU7 261 aa8.73□□□□□ -1.01
SEC13-206ENST00000397102 TGIF2-C20orf24A0A0A6YYL0 155 aa8.72□□□□□ -1.01
SEC13-206ENST00000397102 IFITM10A6NMD0 228 aa8.72□□□□□ -1.01
SEC13-206ENST00000397102 RPL28P46779 137 aaKnown RBP8.72□□□□□ -1.01
SEC13-206ENST00000397102 HBBP68871 147 aa8.72□□□□□ -1.01
SEC13-206ENST00000397102 MRPS36P82909 103 aaKnown RBP8.72□□□□□ -1.01
SEC13-206ENST00000397102 PACRGQ96M98 296 aaPredicted RBP8.72□□□□□ -1.01
SEC13-206ENST00000397102 SPANXA1Q9NS26 97 aa8.72□□□□□ -1.01
SEC13-206ENST00000397102 TCAPO15273 167 aa8.71□□□□□ -1.02
SEC13-206ENST00000397102 C2orf82Q6UX34 121 aa8.71□□□□□ -1.02
SEC13-206ENST00000397102 C22orf24Q9Y442 160 aa8.71□□□□□ -1.02
SEC13-206ENST00000397102 LBHQ53QV2 105 aaPredicted RBP8.7□□□□□ -1.02
SEC13-206ENST00000397102 CRCT1Q9UGL9 99 aa8.7□□□□□ -1.02
SEC13-206ENST00000397102 TMEM250H0YL14 139 aa8.69□□□□□ -1.02
SEC13-206ENST00000397102 RPL32P62910 135 aaKnown RBP8.69□□□□□ -1.02
SEC13-206ENST00000397102 C20orf78Q9BR46 151 aa8.69□□□□□ -1.02
SEC13-206ENST00000397102 IGLV7-46A0A075B6I9 117 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 LOC100996750A0A140TA64 210 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 BCE1O60756 84 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 RIGQ13278 110 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 RGS21Q2M5E4 152 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 KRTAP13-2Q52LG2 175 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 KRTAP4-6Q9BYQ5 205 aa8.68□□□□□ -1.02
SEC13-206ENST00000397102 ZNF727A8MUV8 499 aa8.67□□□□□ -1.02
SEC13-206ENST00000397102 MRPL51Q4U2R6 128 aaKnown RBP8.67□□□□□ -1.02
SEC13-206ENST00000397102 LINC00173Q6ZV60 143 aa8.67□□□□□ -1.02
SEC13-206ENST00000397102 LINC00304Q8N9R0 145 aa8.67□□□□□ -1.02
SEC13-206ENST00000397102 TRBV24-1A0A075B6N3 115 aa8.66□□□□□ -1.02
SEC13-206ENST00000397102 LINC00862A6NCI5 91 aa8.66□□□□□ -1.02
SEC13-206ENST00000397102 LINC00242Q5T6M2 205 aa8.66□□□□□ -1.02
SEC13-206ENST00000397102 ANAPC11Q9NYG5 84 aa8.66□□□□□ -1.02
SEC13-206ENST00000397102 TP73-AS1Q9UF72 201 aa8.66□□□□□ -1.02
SEC13-206ENST00000397102 FSIP2Q5CZC0 6907 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 CTAG1AP78358 180 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 FAM104BQ5XKR9 115 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
SEC13-206ENST00000397102 LINC01561Q8N1V8 128 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 LINC00469Q8N7U9 141 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 SMIM2Q9BVW6 85 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 OSTCQ9NRP0 149 aa8.65□□□□□ -1.02
SEC13-206ENST00000397102 LINC01547P58512 204 aaPredicted RBP8.64□□□□□ -1.03
SEC13-206ENST00000397102 FAM229BQ4G0N7 80 aa8.64□□□□□ -1.03
SEC13-206ENST00000397102 LINC01551Q86U37 167 aa8.64□□□□□ -1.03
SEC13-206ENST00000397102 XAGE1AQ9HD64 81 aa8.64□□□□□ -1.03
SEC13-206ENST00000397102 IFI27P40305 119 aaPredicted RBP8.63□□□□□ -1.03
SEC13-206ENST00000397102 CEBPGP53567 150 aa8.63□□□□□ -1.03
SEC13-206ENST00000397102 TNFRSF6BO95407 300 aa8.62□□□□□ -1.03
SEC13-206ENST00000397102 PRSS2P07478 247 aa8.62□□□□□ -1.03
SEC13-206ENST00000397102 CKS2P33552 79 aa8.62□□□□□ -1.03
SEC13-206ENST00000397102 PPDPFQ9H3Y8 114 aa8.62□□□□□ -1.03
SEC13-206ENST00000397102 V9GYV3 84 aa8.62□□□□□ -1.03
SEC13-206ENST00000397102 CKS1BP61024 79 aa8.61□□□□□ -1.03
SEC13-206ENST00000397102 SMIM7Q9BQ49 75 aa8.61□□□□□ -1.03
SEC13-206ENST00000397102 BATF3Q9NR55 127 aa8.61□□□□□ -1.03
SEC13-206ENST00000397102 NAT8BQ9UHF3 227 aa8.61□□□□□ -1.03
SEC13-206ENST00000397102 PYGO1Q9Y3Y4 419 aa8.61□□□□□ -1.03
SEC13-206ENST00000397102 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
SEC13-206ENST00000397102 SLC51BQ86UW2 128 aa8.6□□□□□ -1.03
SEC13-206ENST00000397102 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
SEC13-206ENST00000397102 C6orf226Q5I0X4 101 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 Q6ZN92 141 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 Q8IZM0 81 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 TMEM141Q96I45 108 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 LINC00167Q96N53 147 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 TOMM7Q9P0U1 55 aa8.59□□□□□ -1.03
SEC13-206ENST00000397102 IGKV2D-26A0A0A0MRZ7 120 aa8.58□□□□□ -1.04
SEC13-206ENST00000397102 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
SEC13-206ENST00000397102 D6R8Y8 96 aa8.58□□□□□ -1.04
SEC13-206ENST00000397102 TEX43Q6ZNM6 134 aa8.58□□□□□ -1.04
SEC13-206ENST00000397102 A0A1B0GW15 77 aa8.57□□□□□ -1.04
SEC13-206ENST00000397102 NPYP01303 97 aa8.57□□□□□ -1.04
SEC13-206ENST00000397102 UBE2AP49459 152 aa8.57□□□□□ -1.04
SEC13-206ENST00000397102 FAM74A3Q4VXF1 159 aa8.57□□□□□ -1.04
SEC13-206ENST00000397102 EIF5A2Q9GZV4 153 aaKnown RBP8.57□□□□□ -1.04
SEC13-206ENST00000397102 RAB5AP20339 215 aa8.56□□□□□ -1.04
SEC13-206ENST00000397102 ASB16-AS1Q495Z4 193 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 86.5 ms