RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 TMEM243Q9BU79 118 aa10.65□□□□□ -0.7
RAPGEF4-201ENST00000397081 LINC00242Q5T6M2 205 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 C14orf132Q9NPU4 83 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 SPANXDQ9BXN6 97 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 SPANXCQ9NY87 97 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 NHLRC4P0CG21 123 aaPredicted RBP10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 PLA2G2AP14555 144 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 XCL1P47992 114 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 CSMD2Q7Z408 3487 aa10.64□□□□□ -0.71
RAPGEF4-201ENST00000397081 COX7A2LO14548 114 aa10.63□□□□□ -0.71
RAPGEF4-201ENST00000397081 LITAFQ99732 161 aa10.63□□□□□ -0.71
RAPGEF4-201ENST00000397081 FLNAP21333 2647 aaKnown RBP10.63□□□□□ -0.71
RAPGEF4-201ENST00000397081 DSCR9P59020 149 aa10.63□□□□□ -0.71
RAPGEF4-201ENST00000397081 ESM1Q9NQ30 184 aa10.62□□□□□ -0.71
RAPGEF4-201ENST00000397081 NDUFA1O15239 70 aa10.62□□□□□ -0.71
RAPGEF4-201ENST00000397081 SDIM1Q6ZPB5 146 aa10.62□□□□□ -0.71
RAPGEF4-201ENST00000397081 LECT2O14960 151 aa10.61□□□□□ -0.71
RAPGEF4-201ENST00000397081 K7EQD1 137 aa10.61□□□□□ -0.71
RAPGEF4-201ENST00000397081 DEFB113Q30KQ7 82 aa10.61□□□□□ -0.71
RAPGEF4-201ENST00000397081 CITED2Q99967 270 aaPredicted RBP10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 VPS13CQ709C8 3753 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 ITPR3Q14573 2671 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 HTN3P15516 51 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 KLK9Q2XQG4 91 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 GCN1Q92616 2671 aaKnown RBP10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 TMEM89A2RUT3 159 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
RAPGEF4-201ENST00000397081 IGLV10-54A0A075B6I4 117 aa10.59□□□□□ -0.71
RAPGEF4-201ENST00000397081 SOSTDC1Q6X4U4 206 aa10.59□□□□□ -0.71
RAPGEF4-201ENST00000397081 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
RAPGEF4-201ENST00000397081 DEFB114Q30KQ6 69 aa10.58□□□□□ -0.72
RAPGEF4-201ENST00000397081 KLK5Q9Y337 293 aaPredicted RBP10.58□□□□□ -0.72
RAPGEF4-201ENST00000397081 TIRAPP58753 221 aa10.58□□□□□ -0.72
RAPGEF4-201ENST00000397081 DNAJC30Q96LL9 226 aa10.58□□□□□ -0.72
RAPGEF4-201ENST00000397081 COX7B2Q8TF08 81 aa10.57□□□□□ -0.72
RAPGEF4-201ENST00000397081 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
RAPGEF4-201ENST00000397081 TRAV13-2A0A0B4J235 113 aa10.57□□□□□ -0.72
RAPGEF4-201ENST00000397081 NCR3O14931 201 aa10.56□□□□□ -0.72
RAPGEF4-201ENST00000397081 WFDC11Q8NEX6 87 aa10.56□□□□□ -0.72
RAPGEF4-201ENST00000397081 MXRA5Q9NR99 2828 aa10.55□□□□□ -0.72
RAPGEF4-201ENST00000397081 CCL24O00175 119 aa10.55□□□□□ -0.72
RAPGEF4-201ENST00000397081 MALP21145 153 aa10.55□□□□□ -0.72
RAPGEF4-201ENST00000397081 FAM218AQ96MZ4 157 aa10.55□□□□□ -0.72
RAPGEF4-201ENST00000397081 DEFB4AO15263 64 aa10.54□□□□□ -0.72
RAPGEF4-201ENST00000397081 ODF3L2Q3SX64 289 aa10.54□□□□□ -0.72
RAPGEF4-201ENST00000397081 LINC00643Q86TS7 51 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 A0A087WVE0 104 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 A0A1B0GX51 115 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 SHISA2Q6UWI4 295 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 TMEM86BQ8N661 226 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 ITPR2Q14571 2701 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 NTM-AS1Q6ZSK4 140 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 Q6YL49 198 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
RAPGEF4-201ENST00000397081 FAM104AQ969W3 186 aa10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 CDC42SE2Q9NRR3 84 aa10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 A0A087WYN8 130 aa10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 PRR3P79522 188 aaKnown RBP10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 C11orf72Q8NBR9 251 aa10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 SMIM11BQ8TCY0 68 aa10.52□□□□□ -0.73
RAPGEF4-201ENST00000397081 BRI3O95415 125 aa10.51□□□□□ -0.73
RAPGEF4-201ENST00000397081 ACYP1P07311 99 aa10.51□□□□□ -0.73
RAPGEF4-201ENST00000397081 CFAP161Q6P656 301 aa10.51□□□□□ -0.73
RAPGEF4-201ENST00000397081 IGLV4-60A0A075B6I1 120 aa10.51□□□□□ -0.73
RAPGEF4-201ENST00000397081 hADV29S1A0JD25 119 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 LINC00337Q8N6G1 96 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 WFDC9Q8NEX5 89 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 TIMM17BO60830 172 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 IGHV4-31P0DP07 118 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 S100A7L2Q5SY68 101 aa10.5□□□□□ -0.73
RAPGEF4-201ENST00000397081 NIPBLQ6KC79 2804 aaeCLIP10.49□□□□□ -0.73
RAPGEF4-201ENST00000397081 Q6Q795 121 aa10.49□□□□□ -0.73
RAPGEF4-201ENST00000397081 SMCR5Q8TEV8 140 aa10.49□□□□□ -0.73
RAPGEF4-201ENST00000397081 J3QLI3 93 aa10.49□□□□□ -0.73
RAPGEF4-201ENST00000397081 LAMTOR3Q9UHA4 124 aa10.49□□□□□ -0.73
RAPGEF4-201ENST00000397081 UNC79Q9P2D8 2635 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 C4orf3Q8WVX3 66 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 LOC107984640A0A0U1RRK4 108 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 PF4P02776 101 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 GYPEP15421 78 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 CCL18P55774 89 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 LINC00526Q96FQ7 95 aa10.48□□□□□ -0.73
RAPGEF4-201ENST00000397081 APCP25054 2843 aa10.47□□□□□ -0.73
RAPGEF4-201ENST00000397081 TRACP01848 142 aa10.47□□□□□ -0.73
RAPGEF4-201ENST00000397081 UBR5O95071 2799 aaPredicted RBP10.46□□□□□ -0.73
RAPGEF4-201ENST00000397081 M0QXV9 152 aa10.46□□□□□ -0.74
RAPGEF4-201ENST00000397081 ANGP03950 147 aaKnown RBP10.46□□□□□ -0.74
RAPGEF4-201ENST00000397081 SS18Q15532 418 aa10.46□□□□□ -0.74
RAPGEF4-201ENST00000397081 TRBV10-1A0A0K0K1A3 114 aa10.46□□□□□ -0.74
RAPGEF4-201ENST00000397081 RNF152Q8N8N0 203 aa10.46□□□□□ -0.74
RAPGEF4-201ENST00000397081 FAM240AA0A1B0GVK7 77 aa10.45□□□□□ -0.74
RAPGEF4-201ENST00000397081 PPDPFQ9H3Y8 114 aa10.45□□□□□ -0.74
RAPGEF4-201ENST00000397081 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
RAPGEF4-201ENST00000397081 TRAV23DV6A0A075B6W5 121 aa10.44□□□□□ -0.74
RAPGEF4-201ENST00000397081 HAMPP81172 84 aa10.44□□□□□ -0.74
RAPGEF4-201ENST00000397081 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
RAPGEF4-201ENST00000397081 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
RAPGEF4-201ENST00000397081 TMEM126AQ9H061 195 aa10.43□□□□□ -0.74
RAPGEF4-201ENST00000397081 CXCL5P42830 114 aa10.42□□□□□ -0.74
RAPGEF4-201ENST00000397081 BEAN1Q3B7T3 259 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms