RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 C15orf56Q8N910 161 aa8.95□□□□□ -0.98
GAPDH-204ENST00000396859 GEMIN7Q9H840 131 aaKnown RBP8.95□□□□□ -0.98
GAPDH-204ENST00000396859 FAT2Q9NYQ8 4349 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 SERF1AO75920 110 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 HERVK_113P63121 156 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 HIGD2BQ4VC39 106 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 PDZD11Q5EBL8 140 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 LINC00242Q5T6M2 205 aa8.94□□□□□ -0.98
GAPDH-204ENST00000396859 GVQW2A0A096LPI5 108 aaPredicted RBP8.93□□□□□ -0.98
GAPDH-204ENST00000396859 IGHV3OR16-9A0A0B4J2B5 98 aa8.93□□□□□ -0.98
GAPDH-204ENST00000396859 CST9LQ9H4G1 147 aa8.93□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BKO60814 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BJP06899 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BOP23527 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BBP33778 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BDP58876 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BCP62807 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST2H2BEQ16778 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.92□□□□□ -0.98
GAPDH-204ENST00000396859 FAM19A3Q7Z5A8 133 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 FAM19A2Q8N3H0 131 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BHQ93079 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BNQ99877 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HIST1H2BMQ99879 126 aa8.92□□□□□ -0.98
GAPDH-204ENST00000396859 HECTD4Q9Y4D8 3996 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 A0A087WZ39 114 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 CNBPP62633 177 aaKnown RBP8.91□□□□□ -0.98
GAPDH-204ENST00000396859 COX6A2Q02221 97 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 OR10D4PQ8NGN7 298 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 ORAOV1Q8WV07 137 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 PKD1P98161 4303 aa8.91□□□□□ -0.98
GAPDH-204ENST00000396859 A0A0J9YXV3 536 aa8.9□□□□□ -0.98
GAPDH-204ENST00000396859 TINCRA0A1B0GVN0 87 aa8.9□□□□□ -0.98
GAPDH-204ENST00000396859 LEPROTL1O95214 131 aa8.9□□□□□ -0.98
GAPDH-204ENST00000396859 LINC01561Q8N1V8 128 aa8.9□□□□□ -0.98
GAPDH-204ENST00000396859 IFI27L1Q96BM0 104 aa8.9□□□□□ -0.98
GAPDH-204ENST00000396859 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
GAPDH-204ENST00000396859 IGHV3-64A0A075B6Q5 118 aa8.89□□□□□ -0.99
GAPDH-204ENST00000396859 SPAG11BQ08648 103 aa8.89□□□□□ -0.99
GAPDH-204ENST00000396859 LINC00469Q8N7U9 141 aa8.89□□□□□ -0.99
GAPDH-204ENST00000396859 C9orf163Q8N9P6 203 aa8.89□□□□□ -0.99
GAPDH-204ENST00000396859 HSPB8Q9UJY1 196 aa8.89□□□□□ -0.99
GAPDH-204ENST00000396859 LINC00310P59036 64 aa8.88□□□□□ -0.99
GAPDH-204ENST00000396859 KRTAP10-1P60331 282 aa8.88□□□□□ -0.99
GAPDH-204ENST00000396859 PKIGQ9Y2B9 76 aa8.88□□□□□ -0.99
GAPDH-204ENST00000396859 IGLV4-69A0A075B6H9 119 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 H3BRM9 83 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 PRSS2P07478 247 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 SYCNQ0VAF6 134 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 LINC01620Q4KN68 170 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 LINC00526Q96FQ7 95 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 C2orf48Q96LS8 159 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 CARD19Q96LW7 228 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 CAMK2N2Q96S95 79 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 CHAC1Q9BUX1 264 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 CDKN2A-AS1Q9UH64 79 aa8.87□□□□□ -0.99
GAPDH-204ENST00000396859 F8WDY8 70 aa8.86□□□□□ -0.99
GAPDH-204ENST00000396859 NUPR1O60356 82 aa8.86□□□□□ -0.99
GAPDH-204ENST00000396859 FABP4P15090 132 aa8.86□□□□□ -0.99
GAPDH-204ENST00000396859 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
GAPDH-204ENST00000396859 TRAV12-1A0A0B4J245 112 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 H0Y8G0 127 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 CDK2AP2O75956 126 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 SLPIP03973 132 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 IGLC3P0DOY3 106 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 TOMM7Q9P0U1 55 aa8.85□□□□□ -0.99
GAPDH-204ENST00000396859 IGLV5-45A0A087WSX0 123 aa8.84□□□□□ -0.99
GAPDH-204ENST00000396859 NDUFA1O15239 70 aa8.84□□□□□ -0.99
GAPDH-204ENST00000396859 C6orf226Q5I0X4 101 aa8.84□□□□□ -0.99
GAPDH-204ENST00000396859 CKS1BP61024 79 aa8.83□□□□□ -1
GAPDH-204ENST00000396859 MAP1LC3CQ9BXW4 147 aa8.83□□□□□ -1
GAPDH-204ENST00000396859 F8VRH5 84 aa8.82□□□□□ -1
GAPDH-204ENST00000396859 COA6Q5JTJ3 125 aaKnown RBP8.82□□□□□ -1
GAPDH-204ENST00000396859 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
GAPDH-204ENST00000396859 Q6ZRU5 148 aa8.82□□□□□ -1
GAPDH-204ENST00000396859 Q8IZM0 81 aa8.82□□□□□ -1
GAPDH-204ENST00000396859 DNAH11Q96DT5 4516 aa8.82□□□□□ -1
GAPDH-204ENST00000396859 C11orf86A6NJI1 115 aa8.81□□□□□ -1
GAPDH-204ENST00000396859 SMIM1B2RUZ4 78 aa8.81□□□□□ -1
GAPDH-204ENST00000396859 SPINK8P0C7L1 97 aa8.81□□□□□ -1
GAPDH-204ENST00000396859 ZNF22P17026 224 aaPredicted RBP8.81□□□□□ -1
GAPDH-204ENST00000396859 SDIM1Q6ZPB5 146 aa8.81□□□□□ -1
GAPDH-204ENST00000396859 DPH3Q96FX2 82 aa8.81□□□□□ -1
GAPDH-204ENST00000396859 HERC2O95714 4834 aa8.8□□□□□ -1
GAPDH-204ENST00000396859 PKHD1P08F94 4074 aa8.8□□□□□ -1
GAPDH-204ENST00000396859 KIAA0087Q14695 138 aa8.8□□□□□ -1
GAPDH-204ENST00000396859 RNF151Q2KHN1 245 aa8.8□□□□□ -1
GAPDH-204ENST00000396859 MRPL35Q9NZE8 188 aaKnown RBP8.8□□□□□ -1
GAPDH-204ENST00000396859 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 S100A6P06703 90 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 CXCL5P42830 114 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 ODF1Q14990 250 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 Q6ZSA8 131 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 COX7B2Q8TF08 81 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 FAM30AQ9NZY2 134 aa8.79□□□□□ -1
GAPDH-204ENST00000396859 TRBV30A0A0K0K1B3 111 aa8.78□□□□□ -1
GAPDH-204ENST00000396859 PLNP26678 52 aa8.78□□□□□ -1
GAPDH-204ENST00000396859 UNQ6190/PRO20217Q6UXQ8 127 aa8.78□□□□□ -1
GAPDH-204ENST00000396859 LINC00474Q9P2X8 69 aa8.78□□□□□ -1
GAPDH-204ENST00000396859 RPL18AQ02543 176 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms