RNA–Protein interactions for RNA: ENST00000396542.5

TNFSF13-204, Transcript of TNF superfamily member 13, humanhuman

TSL 3 BASIC

Gene TNFSF13, Length 726 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-204ENST00000396542 IGHV3OR16-9A0A0B4J2B5 98 aa11.48□□□□□ -0.57
TNFSF13-204ENST00000396542 Q6ZN92 141 aa11.48□□□□□ -0.57
TNFSF13-204ENST00000396542 ERASQ7Z444 233 aa11.48□□□□□ -0.57
TNFSF13-204ENST00000396542 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.47□□□□□ -0.57
TNFSF13-204ENST00000396542 UBE2D1P51668 147 aa11.47□□□□□ -0.57
TNFSF13-204ENST00000396542 LINC00242Q5T6M2 205 aa11.47□□□□□ -0.57
TNFSF13-204ENST00000396542 C2orf88Q9BSF0 95 aa11.47□□□□□ -0.57
TNFSF13-204ENST00000396542 VCX2Q9H322 139 aa11.47□□□□□ -0.57
TNFSF13-204ENST00000396542 LINC00614P0C842 121 aa11.46□□□□□ -0.57
TNFSF13-204ENST00000396542 MALP21145 153 aa11.46□□□□□ -0.57
TNFSF13-204ENST00000396542 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.57
TNFSF13-204ENST00000396542 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
TNFSF13-204ENST00000396542 C5orf38Q86SI9 138 aa11.46□□□□□ -0.57
TNFSF13-204ENST00000396542 A0A096LNJ9 63 aa11.45□□□□□ -0.58
TNFSF13-204ENST00000396542 SDIM1Q6ZPB5 146 aa11.45□□□□□ -0.58
TNFSF13-204ENST00000396542 FAM19A3Q7Z5A8 133 aa11.45□□□□□ -0.58
TNFSF13-204ENST00000396542 SCGB3A1Q96QR1 104 aa11.45□□□□□ -0.58
TNFSF13-204ENST00000396542 Q8N1X5 172 aa11.44□□□□□ -0.58
TNFSF13-204ENST00000396542 APOMO95445 188 aa11.43□□□□□ -0.58
TNFSF13-204ENST00000396542 RAB5BP61020 215 aa11.43□□□□□ -0.58
TNFSF13-204ENST00000396542 HAMPP81172 84 aa11.43□□□□□ -0.58
TNFSF13-204ENST00000396542 COX6A2Q02221 97 aa11.43□□□□□ -0.58
TNFSF13-204ENST00000396542 IGHV3-64A0A075B6Q5 118 aa11.42□□□□□ -0.58
TNFSF13-204ENST00000396542 A0A087WZ39 114 aa11.42□□□□□ -0.58
TNFSF13-204ENST00000396542 ZNF561-AS1K7EIQ3 104 aa11.42□□□□□ -0.58
TNFSF13-204ENST00000396542 TRGC2P03986 189 aa11.42□□□□□ -0.58
TNFSF13-204ENST00000396542 LINC00526Q96FQ7 95 aa11.42□□□□□ -0.58
TNFSF13-204ENST00000396542 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
TNFSF13-204ENST00000396542 CHAC1Q9BUX1 264 aa11.41□□□□□ -0.58
TNFSF13-204ENST00000396542 FAT1Q14517 4588 aa11.4□□□□□ -0.58
TNFSF13-204ENST00000396542 IGLV4-69A0A075B6H9 119 aa11.4□□□□□ -0.58
TNFSF13-204ENST00000396542 HBDP02042 147 aa11.4□□□□□ -0.58
TNFSF13-204ENST00000396542 SCXQ7RTU7 201 aa11.4□□□□□ -0.58
TNFSF13-204ENST00000396542 C2orf48Q96LS8 159 aa11.4□□□□□ -0.58
TNFSF13-204ENST00000396542 SYCNQ0VAF6 134 aa11.39□□□□□ -0.59
TNFSF13-204ENST00000396542 CIRBPQ14011 172 aaKnown RBP11.39□□□□□ -0.59
TNFSF13-204ENST00000396542 PDZD11Q5EBL8 140 aa11.39□□□□□ -0.59
TNFSF13-204ENST00000396542 LINC01561Q8N1V8 128 aa11.39□□□□□ -0.59
TNFSF13-204ENST00000396542 CHCHD1Q96BP2 118 aaKnown RBP11.39□□□□□ -0.59
TNFSF13-204ENST00000396542 ABCA13Q86UQ4 5058 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 PANO1I0J062 215 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 SEC11AP67812 179 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 SPAG11BQ08648 103 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 PMCHL1Q16048 86 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 CIRBP-AS1Q8TBR5 109 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 ORAOV1Q8WV07 137 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 CARD19Q96LW7 228 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 KRTAP4-5Q9BYR2 181 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 CST9LQ9H4G1 147 aa11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.38□□□□□ -0.59
TNFSF13-204ENST00000396542 HERVK_113P63121 156 aa11.37□□□□□ -0.59
TNFSF13-204ENST00000396542 PCLOQ9Y6V0 5065 aa11.37□□□□□ -0.59
TNFSF13-204ENST00000396542 A0A0J9YXV3 536 aa11.36□□□□□ -0.59
TNFSF13-204ENST00000396542 SMR3BP02814 79 aaPredicted RBP11.36□□□□□ -0.59
TNFSF13-204ENST00000396542 PMVKQ15126 192 aa11.36□□□□□ -0.59
TNFSF13-204ENST00000396542 CAMK2N2Q96S95 79 aa11.36□□□□□ -0.59
TNFSF13-204ENST00000396542 F8WDY8 70 aa11.35□□□□□ -0.59
TNFSF13-204ENST00000396542 KIAA0087Q14695 138 aa11.35□□□□□ -0.59
TNFSF13-204ENST00000396542 Q6ZRU5 148 aa11.35□□□□□ -0.59
TNFSF13-204ENST00000396542 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
TNFSF13-204ENST00000396542 SPACA4Q8TDM5 124 aa11.34□□□□□ -0.59
TNFSF13-204ENST00000396542 GEMIN7Q9H840 131 aaKnown RBP11.34□□□□□ -0.59
TNFSF13-204ENST00000396542 CDKN2A-AS1Q9UH64 79 aa11.34□□□□□ -0.59
TNFSF13-204ENST00000396542 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
TNFSF13-204ENST00000396542 ATP5LO75964 103 aa11.33□□□□□ -0.6
TNFSF13-204ENST00000396542 CHTF8P0CG12 524 aa11.33□□□□□ -0.6
TNFSF13-204ENST00000396542 BAGE3Q86Y29 109 aa11.33□□□□□ -0.6
TNFSF13-204ENST00000396542 PKIGQ9Y2B9 76 aa11.33□□□□□ -0.6
TNFSF13-204ENST00000396542 EPM2AB3EWF7 344 aa11.32□□□□□ -0.6
TNFSF13-204ENST00000396542 LINC00310P59036 64 aa11.32□□□□□ -0.6
TNFSF13-204ENST00000396542 RNF151Q2KHN1 245 aa11.32□□□□□ -0.6
TNFSF13-204ENST00000396542 MRPL35Q9NZE8 188 aaKnown RBP11.32□□□□□ -0.6
TNFSF13-204ENST00000396542 Q5VSD8 79 aa11.31□□□□□ -0.6
TNFSF13-204ENST00000396542 A0A096LNI7 61 aa11.3□□□□□ -0.6
TNFSF13-204ENST00000396542 NDUFA1O15239 70 aa11.3□□□□□ -0.6
TNFSF13-204ENST00000396542 HSBP1O75506 76 aa11.3□□□□□ -0.6
TNFSF13-204ENST00000396542 LINC00469Q8N7U9 141 aa11.3□□□□□ -0.6
TNFSF13-204ENST00000396542 VPS13BQ7Z7G8 4022 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 LOC105371267A0A1B0GV96 52 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 FAM229AH3BQW9 127 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BKO60814 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BJP06899 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 IGLC3P0DOY3 106 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BOP23527 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BBP33778 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BDP58876 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BCP62807 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST2H2BEQ16778 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 C10orf25Q5T742 122 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 LINC00528Q8N1L1 170 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BHQ93079 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BNQ99877 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 HIST1H2BMQ99879 126 aa11.29□□□□□ -0.6
TNFSF13-204ENST00000396542 A0A087WYN8 130 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 IGKV2-24A0A0C4DH68 120 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 LOC107984640A0A0U1RRK4 108 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 SERF1AO75920 110 aa11.28□□□□□ -0.6
TNFSF13-204ENST00000396542 UNQ6190/PRO20217Q6UXQ8 127 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms