RNA–Protein interactions for RNA: ENST00000395906.7

CDRT1-204, CMT1A duplicated region transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDRT1, Length 2,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-204ENST00000395906 NDUFA1O15239 70 aa7.04□□□□□ -1.28
CDRT1-204ENST00000395906 NF1P21359 2839 aa7.04□□□□□ -1.28
CDRT1-204ENST00000395906 VMO1Q7Z5L0 202 aa7.04□□□□□ -1.28
CDRT1-204ENST00000395906 LY6G5BQ8NDX9 201 aa7.04□□□□□ -1.28
CDRT1-204ENST00000395906 HIST2H2BCQ6DN03 193 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 HIST2H2BDQ6DRA6 164 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 U3KQE9 123 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 CREBBPQ92793 2442 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 IGLV11-55A0A075B6I3 123 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 A8MZ25 164 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 F5H697 171 aa7.03□□□□□ -1.28
CDRT1-204ENST00000395906 RPL11P62913 178 aaKnown RBP7.03□□□□□ -1.28
CDRT1-204ENST00000395906 RNASE3P12724 160 aaKnown RBP7.02□□□□□ -1.29
CDRT1-204ENST00000395906 HOXD3P31249 432 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-204ENST00000395906 FAM229BQ4G0N7 80 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 C4orf48Q5BLP8 95 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 LYPD2Q6UXB3 125 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 FAM110DQ8TAY7 271 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-204ENST00000395906 CYSRT1A8MQ03 144 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 SOSTDC1Q6X4U4 206 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 ZNF625Q96I27 306 aaPredicted RBP7.02□□□□□ -1.29
CDRT1-204ENST00000395906 RNF5Q99942 180 aa7.02□□□□□ -1.29
CDRT1-204ENST00000395906 SETD2Q9BYW2 2564 aaPredicted RBP7.01□□□□□ -1.29
CDRT1-204ENST00000395906 ITPR3Q14573 2671 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV1-3A0A0C4DH29 117 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 CD28P10747 220 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 MRPL55Q7Z7F7 128 aaKnown RBP7.01□□□□□ -1.29
CDRT1-204ENST00000395906 NCR3O14931 201 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 PF4P02776 101 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 CTSGP08311 255 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 C15orf32Q32M92 178 aa7.01□□□□□ -1.29
CDRT1-204ENST00000395906 CLPSL1A2RUU4 121 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 GNRH2O43555 120 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 IGF1P05019 195 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 PIK3CD-AS1Q5SR53 167 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 ZFAND2AQ8N6M9 145 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 FLNAP21333 2647 aaKnown RBP7□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV3-23P01764 117 aa7□□□□□ -1.29
CDRT1-204ENST00000395906 MTORP42345 2549 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV3OR16-8A0A075B7F1 116 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 A0A087WWL8 130 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV1-8P0DP01 117 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 A0A087WYN8 130 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 ESRGQ1W209 222 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 STHQ8IWL8 128 aa6.99□□□□□ -1.29
CDRT1-204ENST00000395906 H0YGX0 51 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 UBL5Q9BZL1 73 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 MIFP14174 115 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 DAD1P61803 113 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 FAM104AQ969W3 186 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 AKAP9Q99996 3911 aa6.98□□□□□ -1.29
CDRT1-204ENST00000395906 MYO9AB2RTY4 2548 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 ABCA2Q9BZC7 2435 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 M0QY20 66 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 NDUFB3O43676 98 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 MIR7-3HGQ8N6C7 128 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 MUC4Q99102 2169 aa6.97□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV3-66A0A0C4DH42 116 aa6.96□□□□□ -1.29
CDRT1-204ENST00000395906 Q9H8V8 135 aa6.96□□□□□ -1.29
CDRT1-204ENST00000395906 IGHV3-35A0A0C4DH35 117 aa6.96□□□□□ -1.3
CDRT1-204ENST00000395906 IGLV1-47P01700 117 aa6.96□□□□□ -1.3
CDRT1-204ENST00000395906 CRPP02741 224 aa6.96□□□□□ -1.3
CDRT1-204ENST00000395906 ORMDL1Q9P0S3 153 aa6.96□□□□□ -1.3
CDRT1-204ENST00000395906 TRAV10A0A0B4J240 114 aa6.95□□□□□ -1.3
CDRT1-204ENST00000395906 C11orf71Q6IPW1 123 aa6.95□□□□□ -1.3
CDRT1-204ENST00000395906 C6orf223Q8N319 242 aa6.95□□□□□ -1.3
CDRT1-204ENST00000395906 JMJD7-PLA2G4BH0Y9G9 81 aa6.95□□□□□ -1.3
CDRT1-204ENST00000395906 TRBV7-4A0A0J9YYF1 115 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 FAM74A4Q5TZK3 123 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 UNQ9165/PRO28630Q6UXU0 137 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 PDZD2O15018 2839 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 IGKV2-29A2NJV5 120 aaPredicted RBP6.94□□□□□ -1.3
CDRT1-204ENST00000395906 F6UB75 175 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 LECT2O14960 151 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 KRTAP10-9P60411 292 aa6.94□□□□□ -1.3
CDRT1-204ENST00000395906 RNASE13Q5GAN3 156 aaKnown RBP6.93□□□□□ -1.3
CDRT1-204ENST00000395906 DYNLRB2Q8TF09 96 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 OTOGQ6ZRI0 2925 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 IGLV5-45A0A087WSX0 123 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.93□□□□□ -1.3
CDRT1-204ENST00000395906 SMIM11BQ8TCY0 68 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 TM2D3Q9BRN9 247 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 CDKN2A-AS1Q9UH64 79 aa6.93□□□□□ -1.3
CDRT1-204ENST00000395906 NIPBLQ6KC79 2804 aaeCLIP6.92□□□□□ -1.3
CDRT1-204ENST00000395906 IGHV3OR16-13A0A075B7E8 117 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 A0A087WZ39 114 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 IGHV3-74A0A0B4J1X5 117 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 C11orf72Q8NBR9 251 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 NPBQ8NG41 125 aa6.92□□□□□ -1.3
CDRT1-204ENST00000395906 C11orf68Q9H3H3 251 aaKnown RBP6.92□□□□□ -1.3
CDRT1-204ENST00000395906 ERC2-IT1O76042 136 aa6.91□□□□□ -1.3
CDRT1-204ENST00000395906 Q1T7F1 81 aa6.91□□□□□ -1.3
CDRT1-204ENST00000395906 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
CDRT1-204ENST00000395906 LINC00337Q8N6G1 96 aa6.91□□□□□ -1.3
CDRT1-204ENST00000395906 MAPK1IP1LQ8NDC0 245 aa6.91□□□□□ -1.3
CDRT1-204ENST00000395906 ZFP36P26651 326 aaKnown RBP6.9□□□□□ -1.3
CDRT1-204ENST00000395906 TMEM254Q8TBM7 123 aa6.9□□□□□ -1.3
CDRT1-204ENST00000395906 CCL19Q99731 98 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms