RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 NTM-AS1Q6ZSK4 140 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 MIR7-3HGQ8N6C7 128 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 TRBV7-7A0A0K0K1E9 115 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 FAM240AA0A1B0GVK7 77 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 LINC00158P58513 81 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
CLIP2-203ENST00000395060 OR13C6PQ8NH95 151 aa10.23□□□□□ -0.77
CLIP2-203ENST00000395060 A0A087WYN8 130 aa10.23□□□□□ -0.77
CLIP2-203ENST00000395060 LINC01356Q8N9X3 169 aa10.23□□□□□ -0.77
CLIP2-203ENST00000395060 A0A087WVE0 104 aa10.22□□□□□ -0.77
CLIP2-203ENST00000395060 UBR5O95071 2799 aaPredicted RBP10.22□□□□□ -0.77
CLIP2-203ENST00000395060 TMEM89A2RUT3 159 aa10.22□□□□□ -0.77
CLIP2-203ENST00000395060 LINC00337Q8N6G1 96 aa10.22□□□□□ -0.77
CLIP2-203ENST00000395060 GCN1Q92616 2671 aaKnown RBP10.22□□□□□ -0.77
CLIP2-203ENST00000395060 UBE2L6O14933 153 aa10.21□□□□□ -0.77
CLIP2-203ENST00000395060 TIMM17BO60830 172 aa10.21□□□□□ -0.77
CLIP2-203ENST00000395060 CRPP02741 224 aa10.21□□□□□ -0.77
CLIP2-203ENST00000395060 DEFB121Q5J5C9 76 aa10.21□□□□□ -0.77
CLIP2-203ENST00000395060 C22orf24Q9Y442 160 aa10.21□□□□□ -0.77
CLIP2-203ENST00000395060 FLNAP21333 2647 aaKnown RBP10.21□□□□□ -0.78
CLIP2-203ENST00000395060 DNAL4O96015 105 aa10.21□□□□□ -0.78
CLIP2-203ENST00000395060 NOP10Q9NPE3 64 aaKnown RBP10.21□□□□□ -0.78
CLIP2-203ENST00000395060 INSP01308 110 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 LINC00643Q86TS7 51 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 ITPR3Q14573 2671 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 RNASE1P07998 156 aaKnown RBP10.2□□□□□ -0.78
CLIP2-203ENST00000395060 RPL36AP83881 106 aaKnown RBP10.2□□□□□ -0.78
CLIP2-203ENST00000395060 RPL36ALQ969Q0 106 aaKnown RBP10.2□□□□□ -0.78
CLIP2-203ENST00000395060 VPREB3Q9UKI3 123 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 C5orf38Q86SI9 138 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 LINC01600Q96MT4 127 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 SND1-IT1Q9HBX3 110 aa10.2□□□□□ -0.78
CLIP2-203ENST00000395060 NCR3O14931 201 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 MALP21145 153 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 HIST2H2BCQ6DN03 193 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 ZNF702PQ9H963 129 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 hADV29S1A0JD25 119 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 WFDC10AQ9H1F0 79 aa10.19□□□□□ -0.78
CLIP2-203ENST00000395060 STHQ8IWL8 128 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 C3orf22Q8N5N4 141 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 FASNP49327 2511 aaKnown RBP10.18□□□□□ -0.78
CLIP2-203ENST00000395060 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 BEAN1Q3B7T3 259 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 CYSTM1Q9H1C7 97 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 LECT2O14960 151 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 PAX4O43316 350 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 CLPSL2Q6UWE3 100 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 SMIM11BQ8TCY0 68 aa10.18□□□□□ -0.78
CLIP2-203ENST00000395060 TRGV2A0A075B6R0 118 aa10.17□□□□□ -0.78
CLIP2-203ENST00000395060 ZNF843Q8N446 348 aa10.17□□□□□ -0.78
CLIP2-203ENST00000395060 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
CLIP2-203ENST00000395060 ACYP1P07311 99 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 DSCR9P59020 149 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 C1orf158Q8N1D5 194 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 WFDC9Q8NEX5 89 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 IGKV2-28A0A075B6P5 120 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 F5H768 121 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 IGKV2D-28P01615 120 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 K7EQD1 137 aa10.16□□□□□ -0.78
CLIP2-203ENST00000395060 RPL35AP18077 110 aaKnown RBP10.16□□□□□ -0.78
CLIP2-203ENST00000395060 ITPR2Q14571 2701 aa10.15□□□□□ -0.78
CLIP2-203ENST00000395060 TRACP01848 142 aa10.15□□□□□ -0.78
CLIP2-203ENST00000395060 DNAJC30Q96LL9 226 aa10.15□□□□□ -0.78
CLIP2-203ENST00000395060 A0A096LNT2 108 aa10.15□□□□□ -0.79
CLIP2-203ENST00000395060 PRR3P79522 188 aaKnown RBP10.14□□□□□ -0.79
CLIP2-203ENST00000395060 ODF3L2Q3SX64 289 aa10.14□□□□□ -0.79
CLIP2-203ENST00000395060 IGLV4-60A0A075B6I1 120 aa10.14□□□□□ -0.79
CLIP2-203ENST00000395060 IGHV4-31P0DP07 118 aa10.14□□□□□ -0.79
CLIP2-203ENST00000395060 HIST1H4AP62805 103 aaKnown RBP10.14□□□□□ -0.79
CLIP2-203ENST00000395060 LINC00846Q9NV44 126 aa10.14□□□□□ -0.79
CLIP2-203ENST00000395060 A0A1B0GX51 115 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 COX7B2Q8TF08 81 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 TMEM126AQ9H061 195 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 DEFB114Q30KQ6 69 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 PEMTQ9UBM1 199 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 HELZ2Q9BYK8 2649 aaKnown RBP10.13□□□□□ -0.79
CLIP2-203ENST00000395060 A0A096LPF7 62 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 UQCRQO14949 82 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 TENM4Q6N022 2769 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 TMEM243Q9BU79 118 aa10.13□□□□□ -0.79
CLIP2-203ENST00000395060 CCL18P55774 89 aa10.12□□□□□ -0.79
CLIP2-203ENST00000395060 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
CLIP2-203ENST00000395060 TRAV13-2A0A0B4J235 113 aa10.11□□□□□ -0.79
CLIP2-203ENST00000395060 COPS9Q8WXC6 57 aa10.11□□□□□ -0.79
CLIP2-203ENST00000395060 KIR2DL5BQ8NHK3 375 aa10.11□□□□□ -0.79
CLIP2-203ENST00000395060 IMUPQ9GZP8 106 aa10.11□□□□□ -0.79
CLIP2-203ENST00000395060 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
CLIP2-203ENST00000395060 XCL1P47992 114 aa10.1□□□□□ -0.79
CLIP2-203ENST00000395060 HECTD1Q9ULT8 2610 aa10.1□□□□□ -0.79
CLIP2-203ENST00000395060 DEFB113Q30KQ7 82 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 Q6YL49 198 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 COX7CP15954 63 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 HILS1P60008 231 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 LINC00526Q96FQ7 95 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 CXCL5P42830 114 aa10.09□□□□□ -0.79
CLIP2-203ENST00000395060 RPL28P46779 137 aaKnown RBP10.08□□□□□ -0.8
CLIP2-203ENST00000395060 CR1P17927 2039 aa10.08□□□□□ -0.8
CLIP2-203ENST00000395060 J3QLI3 93 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 163.9 ms