RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TMEM238LA0A1B0GVL6 79 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 A6NJY4 79 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 KRTAP10-11P60412 298 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 HERVK_113P63121 156 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 PRSS2P07478 247 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 DAND5Q8N907 189 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 ATP6V0E2Q8NHE4 81 aa10.52□□□□□ -0.73
GPC3-202ENST00000394299 Q8NAQ8 132 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 TSPAN13O95857 204 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 ZFAND6Q6FIF0 208 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 MTURNQ8N3F0 131 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 MAST4O15021 2626 aa10.51□□□□□ -0.73
GPC3-202ENST00000394299 A0A0U1RRA0 63 aa10.5□□□□□ -0.73
GPC3-202ENST00000394299 H3BMG7 143 aa10.5□□□□□ -0.73
GPC3-202ENST00000394299 F5H768 121 aa10.5□□□□□ -0.73
GPC3-202ENST00000394299 PAX4O43316 350 aa10.5□□□□□ -0.73
GPC3-202ENST00000394299 WIPF1O43516 503 aa10.5□□□□□ -0.73
GPC3-202ENST00000394299 LYRM9A8MSI8 78 aa10.49□□□□□ -0.73
GPC3-202ENST00000394299 TMEM262E9PQX1 116 aa10.49□□□□□ -0.73
GPC3-202ENST00000394299 HTN3P15516 51 aa10.49□□□□□ -0.73
GPC3-202ENST00000394299 FAM19A3Q7Z5A8 133 aa10.49□□□□□ -0.73
GPC3-202ENST00000394299 BAHCC1Q9P281 2608 aa10.49□□□□□ -0.73
GPC3-202ENST00000394299 IGLV5-39A0A0G2JS06 123 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 DAD1P61803 113 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 Q9H8V8 135 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 C3orf56Q8N813 242 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 RNF183Q96D59 192 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 RETNQ9HD89 108 aa10.48□□□□□ -0.73
GPC3-202ENST00000394299 LOC107984156A0A0G2JMH3 177 aa10.47□□□□□ -0.73
GPC3-202ENST00000394299 H7C2G1 150 aa10.47□□□□□ -0.73
GPC3-202ENST00000394299 PRIMA1Q86XR5 153 aa10.47□□□□□ -0.73
GPC3-202ENST00000394299 ARL17AQ8IVW1 177 aa10.47□□□□□ -0.73
GPC3-202ENST00000394299 Q8N3U1 123 aa10.47□□□□□ -0.73
GPC3-202ENST00000394299 TRAV26-1A0A087WT03 109 aa10.46□□□□□ -0.73
GPC3-202ENST00000394299 H7C423 109 aa10.46□□□□□ -0.73
GPC3-202ENST00000394299 CLPSL2Q6UWE3 100 aa10.46□□□□□ -0.73
GPC3-202ENST00000394299 COL6A5A8TX70 2615 aa10.46□□□□□ -0.74
GPC3-202ENST00000394299 SMAGPQ0VAQ4 97 aa10.46□□□□□ -0.74
GPC3-202ENST00000394299 PRO1854Q9UHT4 67 aa10.46□□□□□ -0.74
GPC3-202ENST00000394299 NDUFA1O15239 70 aa10.45□□□□□ -0.74
GPC3-202ENST00000394299 MIFP14174 115 aa10.45□□□□□ -0.74
GPC3-202ENST00000394299 RPL24P83731 157 aaKnown RBP10.45□□□□□ -0.74
GPC3-202ENST00000394299 WFDC2Q14508 124 aa10.44□□□□□ -0.74
GPC3-202ENST00000394299 SVIPQ8NHG7 77 aa10.44□□□□□ -0.74
GPC3-202ENST00000394299 C5orf38Q86SI9 138 aa10.44□□□□□ -0.74
GPC3-202ENST00000394299 MIAQ16674 131 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 TOMM7Q9P0U1 55 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 ATP5G1P05496 136 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 SPART-AS1P0CW21 52 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 PSMB2P49721 201 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 SPANXDQ9BXN6 97 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 SPANXCQ9NY87 97 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
GPC3-202ENST00000394299 LINC00959A0A1B0GUT2 108 aa10.42□□□□□ -0.74
GPC3-202ENST00000394299 IGHV3-33P01772 117 aa10.42□□□□□ -0.74
GPC3-202ENST00000394299 IGHV3OR16-9A0A0B4J2B5 98 aa10.41□□□□□ -0.74
GPC3-202ENST00000394299 TEX48A0A1B0GUV7 120 aa10.41□□□□□ -0.74
GPC3-202ENST00000394299 TENM3Q9P273 2699 aa10.41□□□□□ -0.74
GPC3-202ENST00000394299 XCL1P47992 114 aa10.4□□□□□ -0.74
GPC3-202ENST00000394299 A0A0B4J2C4 111 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 TCL1BO95988 128 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 ERG28Q9UKR5 140 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 SCGB1C2P0DMR2 95 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 MEIG1Q5JSS6 88 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 SOSTDC1Q6X4U4 206 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 SH2D6Q7Z4S9 175 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 PRO0461Q9UI25 63 aa10.39□□□□□ -0.75
GPC3-202ENST00000394299 LINC00269Q8N2A0 174 aa10.38□□□□□ -0.75
GPC3-202ENST00000394299 SIGMAR1Q99720 223 aa10.38□□□□□ -0.75
GPC3-202ENST00000394299 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.38□□□□□ -0.75
GPC3-202ENST00000394299 A0A1B0GUV1 79 aa10.38□□□□□ -0.75
GPC3-202ENST00000394299 PRB2P02812 416 aaPredicted RBP10.38□□□□□ -0.75
GPC3-202ENST00000394299 Q1RN00 199 aa10.38□□□□□ -0.75
GPC3-202ENST00000394299 COX7B2Q8TF08 81 aa10.38□□□□□ -0.75
GPC3-202ENST00000394299 DNAH3Q8TD57 4116 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 TIMM17BO60830 172 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 CIRBPQ14011 172 aaKnown RBP10.37□□□□□ -0.75
GPC3-202ENST00000394299 SHISA2Q6UWI4 295 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 LINC00308Q8TCZ7 52 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 C11orf68Q9H3H3 251 aaKnown RBP10.37□□□□□ -0.75
GPC3-202ENST00000394299 IGLV10-54A0A075B6I4 117 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 EGFEM1PQ0D2K5 195 aa10.37□□□□□ -0.75
GPC3-202ENST00000394299 SCGB1A1P11684 91 aa10.36□□□□□ -0.75
GPC3-202ENST00000394299 ETDBQ3ZM63 59 aa10.36□□□□□ -0.75
GPC3-202ENST00000394299 A0A087WZ39 114 aa10.36□□□□□ -0.75
GPC3-202ENST00000394299 F8W1H4 67 aa10.36□□□□□ -0.75
GPC3-202ENST00000394299 SMCPP49901 116 aaPredicted RBP10.36□□□□□ -0.75
GPC3-202ENST00000394299 ANGP03950 147 aaKnown RBP10.35□□□□□ -0.75
GPC3-202ENST00000394299 GAGE12HA6NDE8 117 aa10.34□□□□□ -0.75
GPC3-202ENST00000394299 MRPL23Q16540 153 aaKnown RBP10.34□□□□□ -0.75
GPC3-202ENST00000394299 SS18Q15532 418 aa10.33□□□□□ -0.76
GPC3-202ENST00000394299 TRIAP1O43715 76 aa10.33□□□□□ -0.76
GPC3-202ENST00000394299 IFITM1P13164 125 aa10.33□□□□□ -0.76
GPC3-202ENST00000394299 Q6ZTC4 211 aa10.32□□□□□ -0.76
GPC3-202ENST00000394299 NBEAL1Q6ZS30 2694 aa10.32□□□□□ -0.76
GPC3-202ENST00000394299 ICOSQ9Y6W8 199 aa10.32□□□□□ -0.76
GPC3-202ENST00000394299 A0A1B0GV72 72 aa10.31□□□□□ -0.76
GPC3-202ENST00000394299 HERV-K104P63124 156 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms