RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ERASQ7Z444 233 aa12.3□□□□□ -0.44
PDLIM7-204ENST00000393546 LINC00614P0C842 121 aa12.29□□□□□ -0.44
PDLIM7-204ENST00000393546 RAB5BP61020 215 aa12.29□□□□□ -0.44
PDLIM7-204ENST00000393546 AMELXQ99217 191 aa12.29□□□□□ -0.44
PDLIM7-204ENST00000393546 ZNF561-AS1K7EIQ3 104 aa12.28□□□□□ -0.44
PDLIM7-204ENST00000393546 APOMO95445 188 aa12.28□□□□□ -0.44
PDLIM7-204ENST00000393546 Q6ZSA8 131 aa12.28□□□□□ -0.44
PDLIM7-204ENST00000393546 IGHV3OR16-9A0A0B4J2B5 98 aa12.27□□□□□ -0.45
PDLIM7-204ENST00000393546 UBE2D1P51668 147 aa12.27□□□□□ -0.45
PDLIM7-204ENST00000393546 ZC2HC1BQ5TFG8 222 aa12.27□□□□□ -0.45
PDLIM7-204ENST00000393546 IGHV3-64A0A075B6Q5 118 aa12.26□□□□□ -0.45
PDLIM7-204ENST00000393546 LINC00242Q5T6M2 205 aa12.26□□□□□ -0.45
PDLIM7-204ENST00000393546 LINC00173Q6ZV60 143 aa12.26□□□□□ -0.45
PDLIM7-204ENST00000393546 HAMPP81172 84 aa12.25□□□□□ -0.45
PDLIM7-204ENST00000393546 SDIM1Q6ZPB5 146 aa12.25□□□□□ -0.45
PDLIM7-204ENST00000393546 LINC00526Q96FQ7 95 aa12.25□□□□□ -0.45
PDLIM7-204ENST00000393546 URB1-AS1Q96HZ7 61 aa12.25□□□□□ -0.45
PDLIM7-204ENST00000393546 PCLOQ9Y6V0 5065 aa12.24□□□□□ -0.45
PDLIM7-204ENST00000393546 COX6A2Q02221 97 aa12.24□□□□□ -0.45
PDLIM7-204ENST00000393546 Q8N1X5 172 aa12.24□□□□□ -0.45
PDLIM7-204ENST00000393546 COLCA2A8K830 154 aa12.23□□□□□ -0.45
PDLIM7-204ENST00000393546 TRGC2P03986 189 aa12.23□□□□□ -0.45
PDLIM7-204ENST00000393546 SEC11AP67812 179 aa12.23□□□□□ -0.45
PDLIM7-204ENST00000393546 IGLV4-69A0A075B6H9 119 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 A0A087WZ39 114 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 SYCNQ0VAF6 134 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 FAM19A3Q7Z5A8 133 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 OR10D4PQ8NGN7 298 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 CHAC1Q9BUX1 264 aa12.22□□□□□ -0.45
PDLIM7-204ENST00000393546 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.21□□□□□ -0.45
PDLIM7-204ENST00000393546 HBDP02042 147 aa12.21□□□□□ -0.45
PDLIM7-204ENST00000393546 ORAOV1Q8WV07 137 aa12.21□□□□□ -0.45
PDLIM7-204ENST00000393546 C2orf48Q96LS8 159 aa12.21□□□□□ -0.45
PDLIM7-204ENST00000393546 CARD19Q96LW7 228 aa12.21□□□□□ -0.45
PDLIM7-204ENST00000393546 A0A096LNJ9 63 aa12.2□□□□□ -0.46
PDLIM7-204ENST00000393546 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
PDLIM7-204ENST00000393546 SPAG11BQ08648 103 aa12.2□□□□□ -0.46
PDLIM7-204ENST00000393546 LINC01561Q8N1V8 128 aa12.2□□□□□ -0.46
PDLIM7-204ENST00000393546 CHCHD1Q96BP2 118 aaKnown RBP12.2□□□□□ -0.46
PDLIM7-204ENST00000393546 HERVK_113P63121 156 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 PMCHL1Q16048 86 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 SCXQ7RTU7 201 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 BAGE3Q86Y29 109 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 CAMK2N2Q96S95 79 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 CST9LQ9H4G1 147 aa12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 GEMIN7Q9H840 131 aaKnown RBP12.19□□□□□ -0.46
PDLIM7-204ENST00000393546 SCO1O75880 301 aa12.18□□□□□ -0.46
PDLIM7-204ENST00000393546 PMVKQ15126 192 aa12.18□□□□□ -0.46
PDLIM7-204ENST00000393546 DPH3Q96FX2 82 aa12.18□□□□□ -0.46
PDLIM7-204ENST00000393546 PKIGQ9Y2B9 76 aa12.18□□□□□ -0.46
PDLIM7-204ENST00000393546 A0A0J9YXV3 536 aa12.17□□□□□ -0.46
PDLIM7-204ENST00000393546 F8WDY8 70 aa12.17□□□□□ -0.46
PDLIM7-204ENST00000393546 PDZD11Q5EBL8 140 aa12.17□□□□□ -0.46
PDLIM7-204ENST00000393546 CIRBP-AS1Q8TBR5 109 aa12.17□□□□□ -0.46
PDLIM7-204ENST00000393546 EPM2AB3EWF7 344 aa12.16□□□□□ -0.46
PDLIM7-204ENST00000393546 FAM229AH3BQW9 127 aa12.16□□□□□ -0.46
PDLIM7-204ENST00000393546 ATP5LO75964 103 aa12.16□□□□□ -0.46
PDLIM7-204ENST00000393546 Q6ZRU5 148 aa12.16□□□□□ -0.46
PDLIM7-204ENST00000393546 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.16□□□□□ -0.46
PDLIM7-204ENST00000393546 TINCRA0A1B0GVN0 87 aa12.15□□□□□ -0.46
PDLIM7-204ENST00000393546 NDUFA6P56556 154 aa12.15□□□□□ -0.46
PDLIM7-204ENST00000393546 PANO1I0J062 215 aa12.14□□□□□ -0.47
PDLIM7-204ENST00000393546 CIRBPQ14011 172 aaKnown RBP12.14□□□□□ -0.47
PDLIM7-204ENST00000393546 KRTAP4-5Q9BYR2 181 aa12.14□□□□□ -0.47
PDLIM7-204ENST00000393546 CDKN2A-AS1Q9UH64 79 aa12.14□□□□□ -0.47
PDLIM7-204ENST00000393546 NDUFA1O15239 70 aa12.13□□□□□ -0.47
PDLIM7-204ENST00000393546 HSBP1O75506 76 aa12.13□□□□□ -0.47
PDLIM7-204ENST00000393546 CHTF8P0CG12 524 aa12.13□□□□□ -0.47
PDLIM7-204ENST00000393546 PACRGQ96M98 296 aaPredicted RBP12.13□□□□□ -0.47
PDLIM7-204ENST00000393546 KIAA0087Q14695 138 aa12.12□□□□□ -0.47
PDLIM7-204ENST00000393546 RNF151Q2KHN1 245 aa12.12□□□□□ -0.47
PDLIM7-204ENST00000393546 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
PDLIM7-204ENST00000393546 IGKV2-24A0A0C4DH68 120 aa12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 LOC107984640A0A0U1RRK4 108 aa12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 PRSS2P07478 247 aa12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 Q5VSD8 79 aa12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 SPACA4Q8TDM5 124 aa12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 MRPL35Q9NZE8 188 aaKnown RBP12.11□□□□□ -0.47
PDLIM7-204ENST00000393546 FAT1Q14517 4588 aa12.1□□□□□ -0.47
PDLIM7-204ENST00000393546 MAJINQ3KP22 176 aa12.1□□□□□ -0.47
PDLIM7-204ENST00000393546 UNQ6190/PRO20217Q6UXQ8 127 aa12.1□□□□□ -0.47
PDLIM7-204ENST00000393546 TOMM7Q9P0U1 55 aa12.1□□□□□ -0.47
PDLIM7-204ENST00000393546 LINC00474Q9P2X8 69 aa12.1□□□□□ -0.47
PDLIM7-204ENST00000393546 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
PDLIM7-204ENST00000393546 A0A096LNI7 61 aa12.09□□□□□ -0.47
PDLIM7-204ENST00000393546 C6orf226Q5I0X4 101 aa12.09□□□□□ -0.47
PDLIM7-204ENST00000393546 LINC00528Q8N1L1 170 aa12.09□□□□□ -0.47
PDLIM7-204ENST00000393546 FAM19A2Q8N3H0 131 aa12.09□□□□□ -0.47
PDLIM7-204ENST00000393546 A0A087WYN8 130 aa12.08□□□□□ -0.48
PDLIM7-204ENST00000393546 SERF1AO75920 110 aa12.08□□□□□ -0.48
PDLIM7-204ENST00000393546 Q8IZM0 81 aa12.08□□□□□ -0.48
PDLIM7-204ENST00000393546 H3BRM9 83 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 S100A1P23297 94 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 CKS1BP61024 79 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 GAGE2BQ13066 116 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 C10orf25Q5T742 122 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 IFI27L1Q96BM0 104 aa12.07□□□□□ -0.48
PDLIM7-204ENST00000393546 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
PDLIM7-204ENST00000393546 TRBV30A0A0K0K1B3 111 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms