RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 GYPEP15421 78 aa17.93■□□□□ 0.46
SMARCD3-203ENST00000392811 APOC4P55056 127 aa17.93■□□□□ 0.46
SMARCD3-203ENST00000392811 LYRM7Q5U5X0 104 aa17.93■□□□□ 0.46
SMARCD3-203ENST00000392811 IGLV4-60A0A075B6I1 120 aa17.93■□□□□ 0.46
SMARCD3-203ENST00000392811 Q9H8V8 135 aa17.93■□□□□ 0.46
SMARCD3-203ENST00000392811 ATRQ13535 2644 aa17.92■□□□□ 0.46
SMARCD3-203ENST00000392811 TEP1Q99973 2627 aaKnown RBP17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 NPC2P61916 151 aa17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 WFDC9Q8NEX5 89 aa17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 ERG28Q9UKR5 140 aa17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 LYRM9A8MSI8 78 aa17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 ATP6V0E2Q8NHE4 81 aa17.91■□□□□ 0.46
SMARCD3-203ENST00000392811 G3V4G9 280 aa17.9■□□□□ 0.46
SMARCD3-203ENST00000392811 DEFB4AO15263 64 aa17.9■□□□□ 0.46
SMARCD3-203ENST00000392811 NBEAL2Q6ZNJ1 2754 aa17.9■□□□□ 0.46
SMARCD3-203ENST00000392811 TEX48A0A1B0GUV7 120 aa17.89■□□□□ 0.46
SMARCD3-203ENST00000392811 H7C2G1 150 aa17.89■□□□□ 0.46
SMARCD3-203ENST00000392811 VPS25Q9BRG1 176 aa17.89■□□□□ 0.46
SMARCD3-203ENST00000392811 PRO0255Q9UI72 69 aa17.89■□□□□ 0.46
SMARCD3-203ENST00000392811 DAND5Q8N907 189 aa17.89■□□□□ 0.45
SMARCD3-203ENST00000392811 TCL1BO95988 128 aa17.88■□□□□ 0.45
SMARCD3-203ENST00000392811 IGKV3OR2-268A0A0C4DH90 116 aa17.88■□□□□ 0.45
SMARCD3-203ENST00000392811 ZNF625Q96I27 306 aaPredicted RBP17.88■□□□□ 0.45
SMARCD3-203ENST00000392811 IGHV4-28A0A0C4DH34 117 aa17.87■□□□□ 0.45
SMARCD3-203ENST00000392811 SCGB1C2P0DMR2 95 aa17.86■□□□□ 0.45
SMARCD3-203ENST00000392811 CIRBPQ14011 172 aaKnown RBP17.86■□□□□ 0.45
SMARCD3-203ENST00000392811 TRBV20-1A0A075B6N2 111 aa17.86■□□□□ 0.45
SMARCD3-203ENST00000392811 IFITM1P13164 125 aa17.86■□□□□ 0.45
SMARCD3-203ENST00000392811 SH2D6Q7Z4S9 175 aa17.86■□□□□ 0.45
SMARCD3-203ENST00000392811 ETDBQ3ZM63 59 aa17.85■□□□□ 0.45
SMARCD3-203ENST00000392811 WIPF1O43516 503 aa17.84■□□□□ 0.45
SMARCD3-203ENST00000392811 Q1RN00 199 aa17.84■□□□□ 0.45
SMARCD3-203ENST00000392811 PRIMA1Q86XR5 153 aa17.84■□□□□ 0.45
SMARCD3-203ENST00000392811 RNF183Q96D59 192 aa17.84■□□□□ 0.45
SMARCD3-203ENST00000392811 PAX4O43316 350 aa17.83■□□□□ 0.45
SMARCD3-203ENST00000392811 SMCPP49901 116 aaPredicted RBP17.83■□□□□ 0.45
SMARCD3-203ENST00000392811 A0A096LPF7 62 aa17.82■□□□□ 0.44
SMARCD3-203ENST00000392811 Q8NAQ8 132 aa17.81■□□□□ 0.44
SMARCD3-203ENST00000392811 A0A0U1RRA0 63 aa17.81■□□□□ 0.44
SMARCD3-203ENST00000392811 IGHV4-30-4P0DP06 118 aa17.81■□□□□ 0.44
SMARCD3-203ENST00000392811 MIFP14174 115 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 DAD1P61803 113 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 LINC00308Q8TCZ7 52 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 CELA1Q9UNI1 258 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 IGHV3OR16-9A0A0B4J2B5 98 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 HERV-K104P63124 156 aa17.79■□□□□ 0.44
SMARCD3-203ENST00000392811 TMEM262E9PQX1 116 aa17.78■□□□□ 0.44
SMARCD3-203ENST00000392811 MEIG1Q5JSS6 88 aa17.78■□□□□ 0.44
SMARCD3-203ENST00000392811 COX7B2Q8TF08 81 aa17.77■□□□□ 0.44
SMARCD3-203ENST00000392811 TRRAPQ9Y4A5 3859 aa17.77■□□□□ 0.44
SMARCD3-203ENST00000392811 LINC00959A0A1B0GUT2 108 aa17.77■□□□□ 0.43
SMARCD3-203ENST00000392811 TRBV30A0A0K0K1B3 111 aa17.76■□□□□ 0.43
SMARCD3-203ENST00000392811 F8P00451 2351 aa17.76■□□□□ 0.43
SMARCD3-203ENST00000392811 A0A1B0GUV1 79 aa17.76■□□□□ 0.43
SMARCD3-203ENST00000392811 TRIAP1O43715 76 aa17.76■□□□□ 0.43
SMARCD3-203ENST00000392811 SOSTDC1Q6X4U4 206 aa17.74■□□□□ 0.43
SMARCD3-203ENST00000392811 TOMM7Q9P0U1 55 aa17.74■□□□□ 0.43
SMARCD3-203ENST00000392811 ICOSQ9Y6W8 199 aa17.74■□□□□ 0.43
SMARCD3-203ENST00000392811 A0A087WZ39 114 aa17.73■□□□□ 0.43
SMARCD3-203ENST00000392811 ATP5G1P05496 136 aa17.72■□□□□ 0.43
SMARCD3-203ENST00000392811 C5orf38Q86SI9 138 aa17.72■□□□□ 0.43
SMARCD3-203ENST00000392811 RPL13AP40429 203 aaKnown RBP17.72■□□□□ 0.43
SMARCD3-203ENST00000392811 SPART-AS1P0CW21 52 aa17.71■□□□□ 0.43
SMARCD3-203ENST00000392811 COPS9Q8WXC6 57 aa17.71■□□□□ 0.43
SMARCD3-203ENST00000392811 TRAV26-1A0A087WT03 109 aa17.71■□□□□ 0.42
SMARCD3-203ENST00000392811 OXLD1Q5BKU9 147 aa17.7■□□□□ 0.42
SMARCD3-203ENST00000392811 J3QR89 54 aa17.69■□□□□ 0.42
SMARCD3-203ENST00000392811 SS18Q15532 418 aa17.68■□□□□ 0.42
SMARCD3-203ENST00000392811 ATXN8Q156A1 80 aa17.68■□□□□ 0.42
SMARCD3-203ENST00000392811 KRTAP24-1Q3LI83 254 aa17.68■□□□□ 0.42
SMARCD3-203ENST00000392811 CLPSL2Q6UWE3 100 aa17.68■□□□□ 0.42
SMARCD3-203ENST00000392811 XCL1P47992 114 aa17.67■□□□□ 0.42
SMARCD3-203ENST00000392811 C9JAW5 83 aa17.67■□□□□ 0.42
SMARCD3-203ENST00000392811 HTN3P15516 51 aa17.66■□□□□ 0.42
SMARCD3-203ENST00000392811 KRTAP10-11P60412 298 aa17.65■□□□□ 0.42
SMARCD3-203ENST00000392811 FOXI1Q12951 378 aa17.65■□□□□ 0.42
SMARCD3-203ENST00000392811 SLC25A20O43772 301 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 TEN1Q86WV5 123 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 COX6CP09669 75 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 PCP4P48539 62 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 LINC01620Q4KN68 170 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 PPDPFQ9H3Y8 114 aa17.64■□□□□ 0.41
SMARCD3-203ENST00000392811 LINC00269Q8N2A0 174 aa17.62■□□□□ 0.41
SMARCD3-203ENST00000392811 Q8N3U1 123 aa17.62■□□□□ 0.41
SMARCD3-203ENST00000392811 MIR7-3HGQ8N6C7 128 aa17.62■□□□□ 0.41
SMARCD3-203ENST00000392811 MRPL23Q16540 153 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-203ENST00000392811 FLNBO75369 2602 aaKnown RBP17.61■□□□□ 0.41
SMARCD3-203ENST00000392811 SHISA2Q6UWI4 295 aa17.6■□□□□ 0.41
SMARCD3-203ENST00000392811 ANKRD29Q8N6D5 301 aa17.6■□□□□ 0.41
SMARCD3-203ENST00000392811 M0QXV9 152 aa17.59■□□□□ 0.41
SMARCD3-203ENST00000392811 CLEC2BQ92478 149 aa17.59■□□□□ 0.41
SMARCD3-203ENST00000392811 CARD19Q96LW7 228 aa17.59■□□□□ 0.41
SMARCD3-203ENST00000392811 LINC00158P58513 81 aa17.59■□□□□ 0.41
SMARCD3-203ENST00000392811 PPDPFLQ8WWR9 84 aa17.59■□□□□ 0.41
SMARCD3-203ENST00000392811 ANGP03950 147 aaKnown RBP17.58■□□□□ 0.4
SMARCD3-203ENST00000392811 IBA57-AS1B1ANH7 110 aa17.57■□□□□ 0.4
SMARCD3-203ENST00000392811 C6orf226Q5I0X4 101 aa17.57■□□□□ 0.4
SMARCD3-203ENST00000392811 C3orf56Q8N813 242 aa17.57■□□□□ 0.4
SMARCD3-203ENST00000392811 C11orf68Q9H3H3 251 aaKnown RBP17.57■□□□□ 0.4
SMARCD3-203ENST00000392811 RETNQ9HD89 108 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms