RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 NOTCH3Q9UM47 2321 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 F8P00451 2351 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.14□□□□□ -0.31
TRAF3-203ENST00000392745 SPANXA1Q9NS26 97 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 C19orf73Q9NVV2 129 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 INSP01308 110 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 BEAN1Q3B7T3 259 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 LINC00482Q8N8I6 264 aa13.14□□□□□ -0.31
TRAF3-203ENST00000392745 PF4P02776 101 aa13.13□□□□□ -0.31
TRAF3-203ENST00000392745 DEFB121Q5J5C9 76 aa13.13□□□□□ -0.31
TRAF3-203ENST00000392745 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
TRAF3-203ENST00000392745 FAM240AA0A1B0GVK7 77 aa13.12□□□□□ -0.31
TRAF3-203ENST00000392745 C1orf158Q8N1D5 194 aa13.12□□□□□ -0.31
TRAF3-203ENST00000392745 C11orf72Q8NBR9 251 aa13.12□□□□□ -0.31
TRAF3-203ENST00000392745 TMEM101Q96IK0 257 aa13.12□□□□□ -0.31
TRAF3-203ENST00000392745 A0A0U1RRA0 63 aa13.11□□□□□ -0.31
TRAF3-203ENST00000392745 TIMM17BO60830 172 aa13.11□□□□□ -0.31
TRAF3-203ENST00000392745 MRPL23Q16540 153 aaKnown RBP13.11□□□□□ -0.31
TRAF3-203ENST00000392745 COX6A2Q02221 97 aa13.11□□□□□ -0.31
TRAF3-203ENST00000392745 ZNF625Q96I27 306 aaPredicted RBP13.11□□□□□ -0.31
TRAF3-203ENST00000392745 CHCHD5Q9BSY4 110 aa13.11□□□□□ -0.31
TRAF3-203ENST00000392745 NDUFA1O15239 70 aa13.1□□□□□ -0.31
TRAF3-203ENST00000392745 GIG44P09565 113 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-203ENST00000392745 CMC4P56277 68 aaPredicted RBP13.1□□□□□ -0.31
TRAF3-203ENST00000392745 FAM110AQ9BQ89 295 aa13.1□□□□□ -0.31
TRAF3-203ENST00000392745 IGHV3OR16-12A0A075B7B8 117 aa13.09□□□□□ -0.31
TRAF3-203ENST00000392745 ATRQ13535 2644 aa13.09□□□□□ -0.31
TRAF3-203ENST00000392745 ZNF415Q09FC8 603 aa13.08□□□□□ -0.31
TRAF3-203ENST00000392745 LINC00308Q8TCZ7 52 aa13.08□□□□□ -0.32
TRAF3-203ENST00000392745 MEIG1Q5JSS6 88 aa13.07□□□□□ -0.32
TRAF3-203ENST00000392745 Q9H8V8 135 aa13.07□□□□□ -0.32
TRAF3-203ENST00000392745 TEP1Q99973 2627 aaKnown RBP13.07□□□□□ -0.32
TRAF3-203ENST00000392745 RPL35AP18077 110 aaKnown RBP13.06□□□□□ -0.32
TRAF3-203ENST00000392745 SMIM20Q8N5G0 67 aa13.06□□□□□ -0.32
TRAF3-203ENST00000392745 IGLV5-45A0A087WSX0 123 aa13.06□□□□□ -0.32
TRAF3-203ENST00000392745 TRBV7-7A0A0K0K1E9 115 aa13.06□□□□□ -0.32
TRAF3-203ENST00000392745 TIRAPP58753 221 aa13.06□□□□□ -0.32
TRAF3-203ENST00000392745 TRRAPQ9Y4A5 3859 aa13.06□□□□□ -0.32
TRAF3-203ENST00000392745 CIRBPQ14011 172 aaKnown RBP13.05□□□□□ -0.32
TRAF3-203ENST00000392745 SOSTDC1Q6X4U4 206 aa13.05□□□□□ -0.32
TRAF3-203ENST00000392745 IGHV3-53P01767 116 aa13.04□□□□□ -0.32
TRAF3-203ENST00000392745 DGAT2L7PQ6IED9 249 aa13.04□□□□□ -0.32
TRAF3-203ENST00000392745 C3orf56Q8N813 242 aa13.04□□□□□ -0.32
TRAF3-203ENST00000392745 COX7A2LO14548 114 aa13.04□□□□□ -0.32
TRAF3-203ENST00000392745 PIK3CD-AS1Q5SR53 167 aa13.03□□□□□ -0.32
TRAF3-203ENST00000392745 IGLV5-39A0A0G2JS06 123 aa13.03□□□□□ -0.32
TRAF3-203ENST00000392745 LINC00242Q5T6M2 205 aa13.03□□□□□ -0.32
TRAF3-203ENST00000392745 SMCR5Q8TEV8 140 aa13.03□□□□□ -0.32
TRAF3-203ENST00000392745 LINC00694P0DN24 101 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 FAM236AA0A1B0GUQ0 79 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 FAM236BA0A1B0GV22 79 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 SHISA2Q6UWI4 295 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 CSNK1G2-AS1Q8NCQ2 148 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 IL17DQ8TAD2 202 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 DNAJC30Q96LL9 226 aa13.01□□□□□ -0.33
TRAF3-203ENST00000392745 HERVK_113P63121 156 aa13□□□□□ -0.33
TRAF3-203ENST00000392745 HERV-K104P63124 156 aa13□□□□□ -0.33
TRAF3-203ENST00000392745 SMIM1B2RUZ4 78 aa12.99□□□□□ -0.33
TRAF3-203ENST00000392745 DAZ2Q13117 558 aaKnown RBP12.99□□□□□ -0.33
TRAF3-203ENST00000392745 DAZ4Q86SG3 579 aaKnown RBP12.99□□□□□ -0.33
TRAF3-203ENST00000392745 DAZ3Q9NR90 486 aaKnown RBP12.99□□□□□ -0.33
TRAF3-203ENST00000392745 TRAV13-1A0A0B4J241 112 aa12.98□□□□□ -0.33
TRAF3-203ENST00000392745 RS1O15537 224 aa12.98□□□□□ -0.33
TRAF3-203ENST00000392745 FAM218AQ96MZ4 157 aa12.98□□□□□ -0.33
TRAF3-203ENST00000392745 ACYP1P07311 99 aa12.97□□□□□ -0.33
TRAF3-203ENST00000392745 C9orf66Q5T8R8 295 aa12.97□□□□□ -0.33
TRAF3-203ENST00000392745 PRIMA1Q86XR5 153 aa12.97□□□□□ -0.33
TRAF3-203ENST00000392745 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
TRAF3-203ENST00000392745 TRGV1A0A0A0MS02 117 aa12.97□□□□□ -0.33
TRAF3-203ENST00000392745 BAALC-AS2P0C853 105 aa12.96□□□□□ -0.33
TRAF3-203ENST00000392745 Q6ZTI0 123 aa12.96□□□□□ -0.33
TRAF3-203ENST00000392745 PLAC8L1A1L4L8 177 aa12.96□□□□□ -0.34
TRAF3-203ENST00000392745 CYSRT1A8MQ03 144 aa12.95□□□□□ -0.34
TRAF3-203ENST00000392745 NOP10Q9NPE3 64 aaKnown RBP12.95□□□□□ -0.34
TRAF3-203ENST00000392745 BAHCC1Q9P281 2608 aa12.94□□□□□ -0.34
TRAF3-203ENST00000392745 IMUPQ9GZP8 106 aa12.94□□□□□ -0.34
TRAF3-203ENST00000392745 TRACP01848 142 aa12.94□□□□□ -0.34
TRAF3-203ENST00000392745 NTM-AS1Q6ZSK4 140 aa12.93□□□□□ -0.34
TRAF3-203ENST00000392745 LINC00643Q86TS7 51 aa12.93□□□□□ -0.34
TRAF3-203ENST00000392745 F5H768 121 aa12.92□□□□□ -0.34
TRAF3-203ENST00000392745 FAM19A3Q7Z5A8 133 aa12.92□□□□□ -0.34
TRAF3-203ENST00000392745 COPS9Q8WXC6 57 aa12.91□□□□□ -0.34
TRAF3-203ENST00000392745 C16orf74Q96GX8 76 aa12.91□□□□□ -0.34
TRAF3-203ENST00000392745 Q9HAA7 133 aa12.91□□□□□ -0.34
TRAF3-203ENST00000392745 FBN1P35555 2871 aaKnown RBP12.91□□□□□ -0.34
TRAF3-203ENST00000392745 SDIM1Q6ZPB5 146 aa12.9□□□□□ -0.34
TRAF3-203ENST00000392745 WFDC9Q8NEX5 89 aa12.9□□□□□ -0.34
TRAF3-203ENST00000392745 NBEAL2Q6ZNJ1 2754 aa12.9□□□□□ -0.34
TRAF3-203ENST00000392745 KRTAP24-1Q3LI83 254 aa12.89□□□□□ -0.35
TRAF3-203ENST00000392745 CDC42SE2Q9NRR3 84 aa12.89□□□□□ -0.35
TRAF3-203ENST00000392745 OVOL2Q9BRP0 275 aa12.88□□□□□ -0.35
TRAF3-203ENST00000392745 TMEM126AQ9H061 195 aa12.88□□□□□ -0.35
TRAF3-203ENST00000392745 GAGE2AQ6NT46 116 aa12.87□□□□□ -0.35
TRAF3-203ENST00000392745 CSDC2Q9Y534 153 aaKnown RBP12.87□□□□□ -0.35
TRAF3-203ENST00000392745 RPL36AP83881 106 aaKnown RBP12.86□□□□□ -0.35
TRAF3-203ENST00000392745 RPL36ALQ969Q0 106 aaKnown RBP12.86□□□□□ -0.35
TRAF3-203ENST00000392745 K7EQD1 137 aa12.86□□□□□ -0.35
TRAF3-203ENST00000392745 LINC00337Q8N6G1 96 aa12.86□□□□□ -0.35
TRAF3-203ENST00000392745 MALP21145 153 aa12.85□□□□□ -0.35
TRAF3-203ENST00000392745 C9orf153Q5TBE3 101 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms