RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 PYY3Q5JQD4 70 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 SPATA12Q7Z6I5 190 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 CYSLTR1Q9Y271 337 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 DNAH5Q8TE73 4624 aa4.49□□□□□ -1.69
UBBP1-201ENST00000392399 A0A096LNJ9 63 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 LINC00959A0A1B0GUT2 108 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 C20orf202A1L168 122 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 RPL39P62891 51 aaKnown RBP4.48□□□□□ -1.69
UBBP1-201ENST00000392399 SS18Q15532 418 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 PAPPA-AS1Q5QFB9 102 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 KRTAP26-1Q6PEX3 210 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 CLPSL2Q6UWE3 100 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 C2orf66Q6UXQ4 117 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 MAPKAPK5-AS1Q8N8E1 139 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 NTN5Q8WTR8 489 aaPredicted RBP4.48□□□□□ -1.69
UBBP1-201ENST00000392399 C12orf57Q99622 126 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 LRP1BQ9NZR2 4599 aa4.48□□□□□ -1.69
UBBP1-201ENST00000392399 IGLV10-54A0A075B6I4 117 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 ATP5LO75964 103 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 C3orf79P0CE67 100 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 PMCHL1Q16048 86 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 CFAP161Q6P656 301 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 PET117Q6UWS5 81 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 FAM19A2Q8N3H0 131 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 Q8N814 137 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 BAALCQ8WXS3 180 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 CHCHD10Q8WYQ3 142 aaPredicted RBP4.47□□□□□ -1.69
UBBP1-201ENST00000392399 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
UBBP1-201ENST00000392399 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 SYS1-DBNDD2H3BUS1 97 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 KRTDAPP60985 99 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 S100A12P80511 92 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 Q6ZN92 141 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 TEX43Q6ZNM6 134 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 Q6ZUT4 128 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 ERASQ7Z444 233 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 TMEM141Q96I45 108 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 TIMM17AQ99595 171 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 MAP1LC3CQ9BXW4 147 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 VCX2Q9H322 139 aa4.46□□□□□ -1.7
UBBP1-201ENST00000392399 BIRC6Q9NR09 4857 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 IGLV4-3A0A075B6K6 122 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 GAGE12HA6NDE8 117 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 KRTAP10-2P60368 255 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 FAM104AQ969W3 186 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 IFI27L1Q96BM0 104 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 C2orf88Q9BSF0 95 aa4.45□□□□□ -1.7
UBBP1-201ENST00000392399 IGLV5-52A0A0A0MRZ9 124 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 TRAV13-1A0A0B4J241 112 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 TRAV12-1A0A0B4J245 112 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 C16orf90A8MZG2 172 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 USP17L23D6RBM5 183 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 LECT2O14960 151 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 SCGB1D1O95968 90 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 XCL1P47992 114 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 SEC11AP67812 179 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 FOXI1Q12951 378 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 WFDC2Q14508 124 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 AMELXQ99217 191 aa4.44□□□□□ -1.7
UBBP1-201ENST00000392399 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
UBBP1-201ENST00000392399 IGHV1-58A0A0C4DH39 117 aa4.43□□□□□ -1.7
UBBP1-201ENST00000392399 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.43□□□□□ -1.7
UBBP1-201ENST00000392399 COX7A2LO14548 114 aa4.43□□□□□ -1.7
UBBP1-201ENST00000392399 APOMO95445 188 aa4.43□□□□□ -1.7
UBBP1-201ENST00000392399 GCSHP23434 173 aa4.43□□□□□ -1.7
UBBP1-201ENST00000392399 RNASE13Q5GAN3 156 aaKnown RBP4.43□□□□□ -1.7
UBBP1-201ENST00000392399 DNAH8Q96JB1 4490 aa4.43□□□□□ -1.7
UBBP1-201ENST00000392399 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.42□□□□□ -1.7
UBBP1-201ENST00000392399 GVQW2A0A096LPI5 108 aaPredicted RBP4.42□□□□□ -1.7
UBBP1-201ENST00000392399 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.42□□□□□ -1.7
UBBP1-201ENST00000392399 IGHV3OR16-9A0A0B4J2B5 98 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 PRSS1P07477 247 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 MALP21145 153 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 UBE2D1P51668 147 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 CNBPP62633 177 aaKnown RBP4.42□□□□□ -1.7
UBBP1-201ENST00000392399 LINC00242Q5T6M2 205 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 LINC00173Q6ZV60 143 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 FAM19A3Q7Z5A8 133 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 LINC01561Q8N1V8 128 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 VAMP8Q9BV40 100 aa4.42□□□□□ -1.7
UBBP1-201ENST00000392399 APOBP04114 4563 aaKnown RBP4.42□□□□□ -1.7
UBBP1-201ENST00000392399 A0A087WZ39 114 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 hDV102S1A0JD36 115 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 F8WDY8 70 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 TSTD3H0UI37 97 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 ZNF561-AS1K7EIQ3 104 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 PLNP26678 52 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 HERVK_113P63121 156 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 ODF1Q14990 250 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 PMVKQ15126 192 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 C15orf56Q8N910 161 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 C9orf163Q8N9P6 203 aa4.41□□□□□ -1.7
UBBP1-201ENST00000392399 KIAA1109Q2LD37 5005 aa4.4□□□□□ -1.7
UBBP1-201ENST00000392399 TINCRA0A1B0GVN0 87 aa4.4□□□□□ -1.71
UBBP1-201ENST00000392399 HSBP1L1C9JCN9 74 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms