RNA–Protein interactions for RNA: ENST00000391944.7

ERCC2-203, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 2,334 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-203ENST00000391944 PRO1854Q9UHT4 67 aa13.33□□□□□ -0.28
ERCC2-203ENST00000391944 PAX4O43316 350 aa13.33□□□□□ -0.28
ERCC2-203ENST00000391944 PRSS2P07478 247 aa13.31□□□□□ -0.28
ERCC2-203ENST00000391944 DAD1P61803 113 aa13.31□□□□□ -0.28
ERCC2-203ENST00000391944 MIAQ16674 131 aa13.31□□□□□ -0.28
ERCC2-203ENST00000391944 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.3□□□□□ -0.28
ERCC2-203ENST00000391944 A0A0B4J2C4 111 aa13.3□□□□□ -0.28
ERCC2-203ENST00000391944 EIF4EBP3O60516 100 aaPredicted RBP13.3□□□□□ -0.28
ERCC2-203ENST00000391944 OXLD1Q5BKU9 147 aa13.3□□□□□ -0.28
ERCC2-203ENST00000391944 Q9H8V8 135 aa13.3□□□□□ -0.28
ERCC2-203ENST00000391944 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
ERCC2-203ENST00000391944 OCIAD2Q56VL3 154 aa13.29□□□□□ -0.28
ERCC2-203ENST00000391944 H3BMG7 143 aa13.29□□□□□ -0.28
ERCC2-203ENST00000391944 ATP5G1P05496 136 aa13.28□□□□□ -0.28
ERCC2-203ENST00000391944 SPART-AS1P0CW21 52 aa13.28□□□□□ -0.28
ERCC2-203ENST00000391944 FBN1P35555 2871 aaKnown RBP13.28□□□□□ -0.28
ERCC2-203ENST00000391944 A0A1B0GUV1 79 aa13.28□□□□□ -0.28
ERCC2-203ENST00000391944 LOC107984156A0A0G2JMH3 177 aa13.27□□□□□ -0.28
ERCC2-203ENST00000391944 IGHV3-33P01772 117 aa13.27□□□□□ -0.28
ERCC2-203ENST00000391944 CIRBPQ14011 172 aaKnown RBP13.27□□□□□ -0.28
ERCC2-203ENST00000391944 ARL17AQ8IVW1 177 aa13.27□□□□□ -0.28
ERCC2-203ENST00000391944 A0A096LPF7 62 aa13.27□□□□□ -0.29
ERCC2-203ENST00000391944 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.29
ERCC2-203ENST00000391944 C3orf56Q8N813 242 aa13.27□□□□□ -0.29
ERCC2-203ENST00000391944 ZNF625Q96I27 306 aaPredicted RBP13.27□□□□□ -0.29
ERCC2-203ENST00000391944 F8W1H4 67 aa13.26□□□□□ -0.29
ERCC2-203ENST00000391944 IFITM1P13164 125 aa13.26□□□□□ -0.29
ERCC2-203ENST00000391944 KRTAP10-11P60412 298 aa13.26□□□□□ -0.29
ERCC2-203ENST00000391944 IGHV3OR16-9A0A0B4J2B5 98 aa13.25□□□□□ -0.29
ERCC2-203ENST00000391944 TMEM262E9PQX1 116 aa13.25□□□□□ -0.29
ERCC2-203ENST00000391944 SFTA2Q6UW10 78 aa13.25□□□□□ -0.29
ERCC2-203ENST00000391944 LYRM7Q5U5X0 104 aa13.25□□□□□ -0.29
ERCC2-203ENST00000391944 SHISA2Q6UWI4 295 aa13.25□□□□□ -0.29
ERCC2-203ENST00000391944 RBX1P62877 108 aa13.24□□□□□ -0.29
ERCC2-203ENST00000391944 ERG28Q9UKR5 140 aa13.24□□□□□ -0.29
ERCC2-203ENST00000391944 LINC00959A0A1B0GUT2 108 aa13.24□□□□□ -0.29
ERCC2-203ENST00000391944 EGFEM1PQ0D2K5 195 aa13.24□□□□□ -0.29
ERCC2-203ENST00000391944 PRIMA1Q86XR5 153 aa13.24□□□□□ -0.29
ERCC2-203ENST00000391944 TRAV26-1A0A087WT03 109 aa13.23□□□□□ -0.29
ERCC2-203ENST00000391944 HERV-K104P63124 156 aa13.23□□□□□ -0.29
ERCC2-203ENST00000391944 NPC2P61916 151 aa13.22□□□□□ -0.29
ERCC2-203ENST00000391944 DAND5Q8N907 189 aa13.22□□□□□ -0.29
ERCC2-203ENST00000391944 K7ERU9 68 aa13.22□□□□□ -0.29
ERCC2-203ENST00000391944 STAB1Q9NY15 2570 aa13.21□□□□□ -0.29
ERCC2-203ENST00000391944 A0A087WZ39 114 aa13.21□□□□□ -0.29
ERCC2-203ENST00000391944 PSMB2P49721 201 aa13.21□□□□□ -0.29
ERCC2-203ENST00000391944 COX7B2Q8TF08 81 aa13.21□□□□□ -0.29
ERCC2-203ENST00000391944 PRO0461Q9UI25 63 aa13.21□□□□□ -0.29
ERCC2-203ENST00000391944 WFDC2Q14508 124 aa13.21□□□□□ -0.3
ERCC2-203ENST00000391944 PKD1L1Q8TDX9 2849 aa13.2□□□□□ -0.3
ERCC2-203ENST00000391944 TRBV20-1A0A075B6N2 111 aa13.2□□□□□ -0.3
ERCC2-203ENST00000391944 LINC00308Q8TCZ7 52 aa13.19□□□□□ -0.3
ERCC2-203ENST00000391944 TEX48A0A1B0GUV7 120 aa13.19□□□□□ -0.3
ERCC2-203ENST00000391944 MRPL23Q16540 153 aaKnown RBP13.19□□□□□ -0.3
ERCC2-203ENST00000391944 H7C2G1 150 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 SCGB1C2P0DMR2 95 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 SS18Q15532 418 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 MEIG1Q5JSS6 88 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 CMYA5Q8N3K9 4069 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 TCL1BO95988 128 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 HTN3P15516 51 aa13.18□□□□□ -0.3
ERCC2-203ENST00000391944 C5orf38Q86SI9 138 aa13.17□□□□□ -0.3
ERCC2-203ENST00000391944 COPS9Q8WXC6 57 aa13.17□□□□□ -0.3
ERCC2-203ENST00000391944 A0A0U1RRA0 63 aa13.17□□□□□ -0.3
ERCC2-203ENST00000391944 SH2D6Q7Z4S9 175 aa13.17□□□□□ -0.3
ERCC2-203ENST00000391944 TOMM7Q9P0U1 55 aa13.17□□□□□ -0.3
ERCC2-203ENST00000391944 Q1RN00 199 aa13.16□□□□□ -0.3
ERCC2-203ENST00000391944 MTURNQ8N3F0 131 aa13.16□□□□□ -0.3
ERCC2-203ENST00000391944 ICOSQ9Y6W8 199 aa13.16□□□□□ -0.3
ERCC2-203ENST00000391944 TRBV30A0A0K0K1B3 111 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 XCL1P47992 114 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 RNF151Q2KHN1 245 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 SOSTDC1Q6X4U4 206 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 PPDPFQ9H3Y8 114 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 RETNQ9HD89 108 aa13.14□□□□□ -0.31
ERCC2-203ENST00000391944 G3V4G9 280 aa13.13□□□□□ -0.31
ERCC2-203ENST00000391944 CLPSL2Q6UWE3 100 aa13.13□□□□□ -0.31
ERCC2-203ENST00000391944 LINC00269Q8N2A0 174 aa13.13□□□□□ -0.31
ERCC2-203ENST00000391944 LELP1Q5T871 98 aa13.12□□□□□ -0.31
ERCC2-203ENST00000391944 LINC01561Q8N1V8 128 aa13.12□□□□□ -0.31
ERCC2-203ENST00000391944 MAST4O15021 2626 aa13.12□□□□□ -0.31
ERCC2-203ENST00000391944 CYSRT1A8MQ03 144 aa13.12□□□□□ -0.31
ERCC2-203ENST00000391944 SMCPP49901 116 aaPredicted RBP13.12□□□□□ -0.31
ERCC2-203ENST00000391944 ETDBQ3ZM63 59 aa13.12□□□□□ -0.31
ERCC2-203ENST00000391944 TRIAP1O43715 76 aa13.11□□□□□ -0.31
ERCC2-203ENST00000391944 ANGP03950 147 aaKnown RBP13.11□□□□□ -0.31
ERCC2-203ENST00000391944 Q8N3U1 123 aa13.11□□□□□ -0.31
ERCC2-203ENST00000391944 CBY1Q9Y3M2 126 aa13.1□□□□□ -0.31
ERCC2-203ENST00000391944 REG3AQ06141 175 aa13.1□□□□□ -0.31
ERCC2-203ENST00000391944 BAHCC1Q9P281 2608 aa13.09□□□□□ -0.31
ERCC2-203ENST00000391944 ANK2Q01484 3957 aa13.09□□□□□ -0.31
ERCC2-203ENST00000391944 RPL13AP40429 203 aaKnown RBP13.09□□□□□ -0.31
ERCC2-203ENST00000391944 CD164L2Q6UWJ8 174 aa13.09□□□□□ -0.31
ERCC2-203ENST00000391944 IBA57-AS1B1ANH7 110 aa13.08□□□□□ -0.32
ERCC2-203ENST00000391944 C6orf226Q5I0X4 101 aa13.08□□□□□ -0.32
ERCC2-203ENST00000391944 C11orf68Q9H3H3 251 aaKnown RBP13.08□□□□□ -0.32
ERCC2-203ENST00000391944 DNAH3Q8TD57 4116 aa13.08□□□□□ -0.32
ERCC2-203ENST00000391944 MIR7-3HGQ8N6C7 128 aa13.07□□□□□ -0.32
ERCC2-203ENST00000391944 H3BNG1 76 aa13.07□□□□□ -0.32
ERCC2-203ENST00000391944 Q8IZM0 81 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms