RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 UBE2D1P51668 147 aa9.74□□□□□ -0.85
IGHV3-53-201ENST00000390627 Q6ZSA8 131 aa9.74□□□□□ -0.85
IGHV3-53-201ENST00000390627 LINC00173Q6ZV60 143 aa9.74□□□□□ -0.85
IGHV3-53-201ENST00000390627 IGHV3OR16-9A0A0B4J2B5 98 aa9.73□□□□□ -0.85
IGHV3-53-201ENST00000390627 ZNF561-AS1K7EIQ3 104 aa9.73□□□□□ -0.85
IGHV3-53-201ENST00000390627 XGP55808 180 aa9.73□□□□□ -0.85
IGHV3-53-201ENST00000390627 LINC00242Q5T6M2 205 aa9.73□□□□□ -0.85
IGHV3-53-201ENST00000390627 URB1-AS1Q96HZ7 61 aa9.73□□□□□ -0.85
IGHV3-53-201ENST00000390627 IGHV3-64A0A075B6Q5 118 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 COLCA2A8K830 154 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 HBDP02042 147 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 SLPIP03973 132 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 TRGC2P03986 189 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 SEC11AP67812 179 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 ZC2HC1BQ5TFG8 222 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 FAM30AQ9NZY2 134 aa9.72□□□□□ -0.85
IGHV3-53-201ENST00000390627 CHCHD1Q96BP2 118 aaKnown RBP9.71□□□□□ -0.86
IGHV3-53-201ENST00000390627 A0A087WZ39 114 aa9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 A0A096LNJ9 63 aa9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 SPAG11BQ08648 103 aa9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 FAM19A3Q7Z5A8 133 aa9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 OR10D4PQ8NGN7 298 aa9.7□□□□□ -0.86
IGHV3-53-201ENST00000390627 IGLV4-69A0A075B6H9 119 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 SCO1O75880 301 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 HERVK_113P63121 156 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 COX6A2Q02221 97 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 BAGE3Q86Y29 109 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 LINC01561Q8N1V8 128 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 ORAOV1Q8WV07 137 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 LINC00526Q96FQ7 95 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 CARD19Q96LW7 228 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 PKIGQ9Y2B9 76 aa9.69□□□□□ -0.86
IGHV3-53-201ENST00000390627 HAMPP81172 84 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 SYCNQ0VAF6 134 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 PMVKQ15126 192 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 PMCHL1Q16048 86 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 SDIM1Q6ZPB5 146 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 C2orf48Q96LS8 159 aa9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 GEMIN7Q9H840 131 aaKnown RBP9.68□□□□□ -0.86
IGHV3-53-201ENST00000390627 ATP5LO75964 103 aa9.67□□□□□ -0.86
IGHV3-53-201ENST00000390627 PDZD11Q5EBL8 140 aa9.67□□□□□ -0.86
IGHV3-53-201ENST00000390627 Q8N1X5 172 aa9.67□□□□□ -0.86
IGHV3-53-201ENST00000390627 CAMK2N2Q96S95 79 aa9.67□□□□□ -0.86
IGHV3-53-201ENST00000390627 CHAC1Q9BUX1 264 aa9.67□□□□□ -0.86
IGHV3-53-201ENST00000390627 F8WDY8 70 aa9.66□□□□□ -0.86
IGHV3-53-201ENST00000390627 SCXQ7RTU7 201 aa9.66□□□□□ -0.86
IGHV3-53-201ENST00000390627 CST9LQ9H4G1 147 aa9.66□□□□□ -0.86
IGHV3-53-201ENST00000390627 A0A0J9YXV3 536 aa9.65□□□□□ -0.86
IGHV3-53-201ENST00000390627 TINCRA0A1B0GVN0 87 aa9.65□□□□□ -0.86
IGHV3-53-201ENST00000390627 HSBP1O75506 76 aa9.65□□□□□ -0.86
IGHV3-53-201ENST00000390627 PACRGQ96M98 296 aaPredicted RBP9.65□□□□□ -0.86
IGHV3-53-201ENST00000390627 Q6ZRU5 148 aa9.64□□□□□ -0.87
IGHV3-53-201ENST00000390627 NDUFA1O15239 70 aa9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 NDUFA6P56556 154 aa9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 LINC00469Q8N7U9 141 aa9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 CIRBP-AS1Q8TBR5 109 aa9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 CDKN2A-AS1Q9UH64 79 aa9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.63□□□□□ -0.87
IGHV3-53-201ENST00000390627 SERF1AO75920 110 aa9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 SMR3BP02814 79 aaPredicted RBP9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 PRSS2P07478 247 aa9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 S100A1P23297 94 aa9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 CIRBPQ14011 172 aaKnown RBP9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 MRPL35Q9NZE8 188 aaKnown RBP9.62□□□□□ -0.87
IGHV3-53-201ENST00000390627 IGLV5-45A0A087WSX0 123 aa9.61□□□□□ -0.87
IGHV3-53-201ENST00000390627 EPM2AB3EWF7 344 aa9.61□□□□□ -0.87
IGHV3-53-201ENST00000390627 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
IGHV3-53-201ENST00000390627 SPACA4Q8TDM5 124 aa9.61□□□□□ -0.87
IGHV3-53-201ENST00000390627 LINC00474Q9P2X8 69 aa9.61□□□□□ -0.87
IGHV3-53-201ENST00000390627 IGKV2-24A0A0C4DH68 120 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 LOC107984640A0A0U1RRK4 108 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 FAM229AH3BQW9 127 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 PANO1I0J062 215 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 CHTF8P0CG12 524 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 KIAA0087Q14695 138 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 FAM19A2Q8N3H0 131 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 IFI27L1Q96BM0 104 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 DPH3Q96FX2 82 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 TOMM7Q9P0U1 55 aa9.6□□□□□ -0.87
IGHV3-53-201ENST00000390627 H3BRM9 83 aa9.59□□□□□ -0.87
IGHV3-53-201ENST00000390627 ATP6V1G1O75348 118 aa9.59□□□□□ -0.87
IGHV3-53-201ENST00000390627 Q5VSD8 79 aa9.59□□□□□ -0.87
IGHV3-53-201ENST00000390627 Q8IZM0 81 aa9.59□□□□□ -0.87
IGHV3-53-201ENST00000390627 KRTAP17-1Q9BYP8 105 aa9.59□□□□□ -0.87
IGHV3-53-201ENST00000390627 FAT1Q14517 4588 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 A0A096LNI7 61 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 SMIM1B2RUZ4 78 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 LINC00310P59036 64 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 MAJINQ3KP22 176 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 LCE2DQ5TA82 110 aaPredicted RBP9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 UNQ6190/PRO20217Q6UXQ8 127 aa9.58□□□□□ -0.88
IGHV3-53-201ENST00000390627 A0A087WYN8 130 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 TRAV12-1A0A0B4J245 112 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 TRBV30A0A0K0K1B3 111 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 LEPROTL1O95214 131 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 CKS1BP61024 79 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 C6orf226Q5I0X4 101 aa9.57□□□□□ -0.88
IGHV3-53-201ENST00000390627 LINC00528Q8N1L1 170 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms