RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 S100A13Q99584 98 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 KRTAP4-4Q9BYR3 166 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 C10orf95Q9H7T3 257 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 BTAF1O14981 1849 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 MAP2P11137 1827 aaKnown RBP0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 LAMC3Q9Y6N6 1575 aa0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 PDCD11Q14690 1871 aaKnown RBP0.35□□□□□ -2.35
TRAJ3-201ENST00000390534 SIPA1L3O60292 1781 aaPredicted RBP0.34□□□□□ -2.35
TRAJ3-201ENST00000390534 EHBP1L1Q8N3D4 1523 aa0.34□□□□□ -2.35
TRAJ3-201ENST00000390534 MYOM1P52179 1685 aa0.34□□□□□ -2.35
TRAJ3-201ENST00000390534 KIF21AQ7Z4S6 1674 aa0.34□□□□□ -2.35
TRAJ3-201ENST00000390534 SBF2Q86WG5 1849 aa0.34□□□□□ -2.35
TRAJ3-201ENST00000390534 IQCF6A8MYZ5 107 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 D6R8Y8 96 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 H3BQF6 201 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 PIN1P1O15428 100 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 SPINK7P58062 85 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 ARHGEF5Q12774 1597 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 HMGN3Q15651 99 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 ALKAL2Q6UX46 152 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 MUSTN1Q8IVN3 82 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 DEFB107AQ8IZN7 70 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 RB1CC1Q8TDY2 1594 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 LINC01600Q96MT4 127 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 LINC00846Q9NV44 126 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 PLCE1Q9P212 2302 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 RABAC1Q9UI14 185 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 TRIOBPQ9H2D6 2365 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 TOP2BQ02880 1626 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 MED14O60244 1454 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 CCDC18Q5T9S5 1454 aa0.34□□□□□ -2.36
TRAJ3-201ENST00000390534 MUC19Q7Z5P9 8384 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 MYH4Q9Y623 1939 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 UACAQ9BZF9 1416 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 DOPEY2Q9Y3R5 2298 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 TRBV6-1A0A0K0K1D8 114 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 HMGN2P05204 90 aaKnown RBP0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 SNRPFP62306 86 aaKnown RBP0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 GNGT1P63211 74 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 ADIRFQ15847 76 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 KRTAP5-7Q6L8G8 165 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 SPATA8Q6RVD6 105 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 LINC00643Q86TS7 51 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 FAM103A1Q9BTL3 118 aaKnown RBP0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 KRTAP4-3Q9BYR4 195 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 ST20Q9HBF5 79 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 SPCS1Q9Y6A9 102 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 ATP10BO94823 1461 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 PLXNB2O15031 1838 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 NEXMIFQ5QGS0 1516 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 MON2Q7Z3U7 1717 aa0.33□□□□□ -2.36
TRAJ3-201ENST00000390534 SRCAPQ6ZRS2 3230 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 RGPD4Q7Z3J3 1758 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 DNHD1Q96M86 4753 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 CACNA1HO95180 2353 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 F8P00451 2351 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 SCRIBQ14160 1630 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 WNK3Q9BYP7 1800 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 ANKRD17O75179 2603 aaKnown RBP0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 MYMXA0A1B0GTQ4 84 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 KANTRA0A1W2PQU2 76 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 H0Y9P7 68 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 IGLC3P0DOY3 106 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 S100A3P33764 101 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 PLAC8Q9NZF1 115 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 ARHGAP35Q9NRY4 1499 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 SCN7AQ01118 1682 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 ZFHX3Q15911 3703 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 EPRSP07814 1512 aaKnown RBP0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 ARHGEF12Q9NZN5 1544 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 RGPD3A6NKT7 1758 aaPredicted RBP0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 UNC13BO14795 1591 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 ERCC6L2Q5T890 1561 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 DIP2CQ9Y2E4 1556 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 FAM208BQ5VWN6 2430 aa0.32□□□□□ -2.36
TRAJ3-201ENST00000390534 URB1O60287 2271 aaKnown RBP0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 RYR3Q15413 4870 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 RAPGEF6Q8TEU7 1601 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 CEP162Q5TB80 1403 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 CLTCQ00610 1675 aaKnown RBP0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 MEGF8Q7Z7M0 2845 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 SPTBN2O15020 2390 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 POLA1P09884 1462 aaPredicted RBP0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 C1orf167Q5SNV9 1468 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 LRRC37A2A6NM11 1700 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 KNDC1Q76NI1 1749 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 A0A0D9SFI3 127 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 A0A1B0GU69 56 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 H3BUT2 72 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 ACYP1P07311 99 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 IGLC2P0DOY2 106 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 COX6A2Q02221 97 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 PRB3Q04118 309 aaPredicted RBP0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 PLGLAQ15195 96 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 BVES-AS1Q5T3Y7 98 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 C6orf201Q7Z4U5 140 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 UBE2D4Q9Y2X8 147 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 USF3Q68DE3 2245 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 ABCC3O15438 1527 aa0.31□□□□□ -2.36
TRAJ3-201ENST00000390534 KDM3BQ7LBC6 1761 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms