RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 OBSCN-AS1Q96MR7 158 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 DUOX1Q9NRD9 1551 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 LINC00846Q9NV44 126 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 PRO2289Q9P1D8 64 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 V9GYV3 84 aa2.04□□□□□ -2.08
TRAJ17-201ENST00000390520 TOGARAM1Q9Y4F4 1720 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 A0A1B0GUT8 65 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 A0A1W2PNU3 283 aaPredicted RBP2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 M0R135 149 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 ZNF861PO60384 105 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 CCL18P55774 89 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 FDCSPQ8NFU4 85 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 TMEM263Q8WUH6 116 aaKnown RBP2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 HIGD2AQ9BW72 106 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 PRR14LQ5THK1 2151 aa2.03□□□□□ -2.08
TRAJ17-201ENST00000390520 A0A0J9YWU9 116 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 K7EMI3 77 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 NDUFB1O75438 58 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 FCER1GP30273 86 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 NREPQ16612 68 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 HCP5Q6MZN7 132 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 COX7B2Q8TF08 81 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 SDK1Q7Z5N4 2213 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 DOCK10Q96BY6 2186 aa2.02□□□□□ -2.09
TRAJ17-201ENST00000390520 IGLV4-69A0A075B6H9 119 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 IGKV3OR2-268A0A0C4DH90 116 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 LINC01546A6NGU7 62 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 IGKV3-20P01619 116 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 PDE6GP18545 87 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 PLNP26678 52 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 ZNF137PP52743 207 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 DEFB132Q7Z7B7 95 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 ZCCHC13Q8WW36 166 aaKnown RBP2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 SPRR4Q96PI1 79 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 R4GMQ9 66 aa2.01□□□□□ -2.09
TRAJ17-201ENST00000390520 ANKRD17O75179 2603 aaKnown RBP2□□□□□ -2.09
TRAJ17-201ENST00000390520 CTXND1A0A1B0GTU2 59 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 LRCOL1A6NCL2 159 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 M0R3E3 92 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 UQCR11O14957 56 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 IGLV3-1P01715 115 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 CTSGP08311 255 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 Q6ZTI0 123 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 WFDC6Q9BQY6 131 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 R4GN34 69 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 BRWD1Q9NSI6 2320 aa2□□□□□ -2.09
TRAJ17-201ENST00000390520 PRRC2AP48634 2157 aaKnown RBP1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 IGKV3D-15A0A087WSY6 115 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 A0A087WTM6 91 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 TRAV21A0A0B4J279 112 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 J3QRE1 110 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 MGPP08493 103 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 SPATA8Q6RVD6 105 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 SPINT4Q6UDR6 99 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 ENHOQ6UWT2 76 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 LINC00322Q6ZN03 302 aaPredicted RBP1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 LINC00208Q96KT6 92 aa1.99□□□□□ -2.09
TRAJ17-201ENST00000390520 KMT2BQ9UMN6 2715 aaPredicted RBP1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 C4AP0C0L4 1744 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 H0Y9P7 68 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 COX6B1P14854 86 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 SPINK7P58062 85 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 NDPQ00604 133 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 KRTAP24-1Q3LI83 254 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 LINC00612Q8N6U2 182 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 UBL5Q9BZL1 73 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 LMO7Q8WWI1 1683 aa1.98□□□□□ -2.09
TRAJ17-201ENST00000390520 COL5A1P20908 1838 aaPredicted RBP1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 TRBV6-1A0A0K0K1D8 114 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 TRBV6-4A0A1B0GX49 114 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 IGIPA6NJ69 53 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 IL9P15248 144 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 TMEM14CQ9P0S9 112 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 CCL26Q9Y258 94 aa1.97□□□□□ -2.09
TRAJ17-201ENST00000390520 CEP192Q8TEP8 1941 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 NBDYA0A0U1RRE5 68 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 JMJD7-PLA2G4BH0Y9G9 81 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 HMGA2P52926 109 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 LY6EQ16553 131 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 GFRA4Q9GZZ7 299 aa1.96□□□□□ -2.1
TRAJ17-201ENST00000390520 A0A0G2JMZ2 1700 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 LRRC37A2A6NM11 1700 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 LRRC37AA6NMS7 1700 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 C4BP0C0L5 1744 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 IGKV2-40A0A087WW87 121 aaPredicted RBP1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 A0A1W2PNN7 141 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 IGKV2D-40P01614 121 aaPredicted RBP1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 IGKV2-30P06310 120 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 Q8N3U1 123 aa1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 ZNF625Q96I27 306 aaPredicted RBP1.95□□□□□ -2.1
TRAJ17-201ENST00000390520 PLXNB2O15031 1838 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 FREM1Q5H8C1 2179 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 I3L3M4 83 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 TPRXLQ17RH7 258 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 C10orf113Q5VZT2 155 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 TNCP24821 2201 aa1.94□□□□□ -2.1
TRAJ17-201ENST00000390520 SCO2A0A1W2PP80 73 aa1.93□□□□□ -2.1
TRAJ17-201ENST00000390520 M0R1W7 72 aa1.93□□□□□ -2.1
TRAJ17-201ENST00000390520 RNASE3P12724 160 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms