RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 A0A1B0GUT8 65 aa12.57□□□□□ -0.4
CNEP1R1-201ENST00000389134 SUMO2P61956 95 aaKnown RBP12.57□□□□□ -0.4
CNEP1R1-201ENST00000389134 AMN1Q8IY45 258 aa12.57□□□□□ -0.4
CNEP1R1-201ENST00000389134 NUPR1O60356 82 aa12.55□□□□□ -0.4
CNEP1R1-201ENST00000389134 TYMSOSQ8TAI1 123 aa12.55□□□□□ -0.4
CNEP1R1-201ENST00000389134 A0A087X002 238 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 TRBV30A0A0K0K1B3 111 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 SMKR1H3BMG3 65 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 PPP1R2P9O14990 202 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 CRYGAP11844 174 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 NRACQ8N912 160 aa12.54□□□□□ -0.4
CNEP1R1-201ENST00000389134 HIGD1CA8MV81 97 aa12.53□□□□□ -0.4
CNEP1R1-201ENST00000389134 NDUFC2-KCTD14E9PQ53 114 aa12.53□□□□□ -0.4
CNEP1R1-201ENST00000389134 C9orf129Q5T035 196 aaKnown RBP12.53□□□□□ -0.4
CNEP1R1-201ENST00000389134 CDIP1Q9H305 208 aa12.52□□□□□ -0.41
CNEP1R1-201ENST00000389134 KIAA0087Q14695 138 aa12.51□□□□□ -0.41
CNEP1R1-201ENST00000389134 FAM104AQ969W3 186 aa12.51□□□□□ -0.41
CNEP1R1-201ENST00000389134 TGIF2-C20orf24A0A0A6YYL0 155 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 TCAPO15273 167 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 RPL39P62891 51 aaKnown RBP12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 HBBP68871 147 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 MRPS36P82909 103 aaKnown RBP12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 TPRXLQ17RH7 258 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 PACRGQ96M98 296 aaPredicted RBP12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 CTDSP1Q9GZU7 261 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 SPANXA1Q9NS26 97 aa12.49□□□□□ -0.41
CNEP1R1-201ENST00000389134 IFITM10A6NMD0 228 aa12.48□□□□□ -0.41
CNEP1R1-201ENST00000389134 TMEM250H0YL14 139 aa12.48□□□□□ -0.41
CNEP1R1-201ENST00000389134 RPL28P46779 137 aaKnown RBP12.47□□□□□ -0.41
CNEP1R1-201ENST00000389134 RIGQ13278 110 aa12.47□□□□□ -0.41
CNEP1R1-201ENST00000389134 RGS21Q2M5E4 152 aa12.47□□□□□ -0.41
CNEP1R1-201ENST00000389134 LBHQ53QV2 105 aaPredicted RBP12.47□□□□□ -0.41
CNEP1R1-201ENST00000389134 RETNLBQ9BQ08 111 aa12.47□□□□□ -0.41
CNEP1R1-201ENST00000389134 C2orf82Q6UX34 121 aa12.46□□□□□ -0.41
CNEP1R1-201ENST00000389134 C20orf78Q9BR46 151 aa12.46□□□□□ -0.41
CNEP1R1-201ENST00000389134 C22orf24Q9Y442 160 aa12.46□□□□□ -0.41
CNEP1R1-201ENST00000389134 RPL32P62910 135 aaKnown RBP12.45□□□□□ -0.42
CNEP1R1-201ENST00000389134 LCE2DQ5TA82 110 aaPredicted RBP12.44□□□□□ -0.42
CNEP1R1-201ENST00000389134 TRBV24-1A0A075B6N3 115 aa12.42□□□□□ -0.42
CNEP1R1-201ENST00000389134 LINC00862A6NCI5 91 aa12.42□□□□□ -0.42
CNEP1R1-201ENST00000389134 MRPL51Q4U2R6 128 aaKnown RBP12.42□□□□□ -0.42
CNEP1R1-201ENST00000389134 IGLV7-46A0A075B6I9 117 aa12.41□□□□□ -0.42
CNEP1R1-201ENST00000389134 ZNF727A8MUV8 499 aa12.41□□□□□ -0.42
CNEP1R1-201ENST00000389134 BCE1O60756 84 aa12.41□□□□□ -0.42
CNEP1R1-201ENST00000389134 FAM104BQ5XKR9 115 aa12.41□□□□□ -0.42
CNEP1R1-201ENST00000389134 OSTCQ9NRP0 149 aa12.41□□□□□ -0.42
CNEP1R1-201ENST00000389134 LINC00242Q5T6M2 205 aa12.4□□□□□ -0.42
CNEP1R1-201ENST00000389134 LINC00173Q6ZV60 143 aa12.4□□□□□ -0.42
CNEP1R1-201ENST00000389134 LINC00304Q8N9R0 145 aa12.4□□□□□ -0.42
CNEP1R1-201ENST00000389134 BATF3Q9NR55 127 aa12.4□□□□□ -0.42
CNEP1R1-201ENST00000389134 FSIP2Q5CZC0 6907 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 CEBPGP53567 150 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 KRTAP13-2Q52LG2 175 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 LINC01561Q8N1V8 128 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 TP73-AS1Q9UF72 201 aa12.39□□□□□ -0.43
CNEP1R1-201ENST00000389134 CKS2P33552 79 aa12.38□□□□□ -0.43
CNEP1R1-201ENST00000389134 LINC00469Q8N7U9 141 aa12.38□□□□□ -0.43
CNEP1R1-201ENST00000389134 SMIM2Q9BVW6 85 aa12.38□□□□□ -0.43
CNEP1R1-201ENST00000389134 ANAPC11Q9NYG5 84 aa12.38□□□□□ -0.43
CNEP1R1-201ENST00000389134 CRCT1Q9UGL9 99 aa12.38□□□□□ -0.43
CNEP1R1-201ENST00000389134 CTAG1AP78358 180 aa12.37□□□□□ -0.43
CNEP1R1-201ENST00000389134 MRPL55Q7Z7F7 128 aaKnown RBP12.37□□□□□ -0.43
CNEP1R1-201ENST00000389134 TNFRSF6BO95407 300 aa12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 PRSS2P07478 247 aa12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 IFI27P40305 119 aaPredicted RBP12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 SLC51BQ86UW2 128 aa12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 SMIM7Q9BQ49 75 aa12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 XAGE1AQ9HD64 81 aa12.36□□□□□ -0.43
CNEP1R1-201ENST00000389134 CKS1BP61024 79 aa12.35□□□□□ -0.43
CNEP1R1-201ENST00000389134 FAM229BQ4G0N7 80 aa12.35□□□□□ -0.43
CNEP1R1-201ENST00000389134 V9GYV3 84 aa12.35□□□□□ -0.43
CNEP1R1-201ENST00000389134 LINC01547P58512 204 aaPredicted RBP12.34□□□□□ -0.43
CNEP1R1-201ENST00000389134 NAT8BQ9UHF3 227 aa12.34□□□□□ -0.43
CNEP1R1-201ENST00000389134 PYGO1Q9Y3Y4 419 aa12.34□□□□□ -0.43
CNEP1R1-201ENST00000389134 Q6ZN92 141 aa12.32□□□□□ -0.44
CNEP1R1-201ENST00000389134 TMEM141Q96I45 108 aa12.32□□□□□ -0.44
CNEP1R1-201ENST00000389134 IGLV4-3A0A075B6K6 122 aa12.31□□□□□ -0.44
CNEP1R1-201ENST00000389134 C6orf226Q5I0X4 101 aa12.31□□□□□ -0.44
CNEP1R1-201ENST00000389134 PPDPFQ9H3Y8 114 aa12.31□□□□□ -0.44
CNEP1R1-201ENST00000389134 TOMM7Q9P0U1 55 aa12.31□□□□□ -0.44
CNEP1R1-201ENST00000389134 IGKV2D-26A0A0A0MRZ7 120 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 A0A1B0GW15 77 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 D6R8Y8 96 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 RAB5AP20339 215 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 BLOC1S1P78537 153 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 FAM74A3Q4VXF1 159 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 TEX43Q6ZNM6 134 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 Q8IZM0 81 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 LINC00167Q96N53 147 aa12.29□□□□□ -0.44
CNEP1R1-201ENST00000389134 RPL37AP8A6NKH3 93 aa12.28□□□□□ -0.44
CNEP1R1-201ENST00000389134 NPYP01303 97 aa12.28□□□□□ -0.44
CNEP1R1-201ENST00000389134 C2orf88Q9BSF0 95 aa12.28□□□□□ -0.44
CNEP1R1-201ENST00000389134 EIF5A2Q9GZV4 153 aaKnown RBP12.28□□□□□ -0.44
CNEP1R1-201ENST00000389134 UBE2AP49459 152 aa12.27□□□□□ -0.45
CNEP1R1-201ENST00000389134 KRTAP13-1Q8IUC0 172 aa12.27□□□□□ -0.45
CNEP1R1-201ENST00000389134 ALKBH7Q9BT30 221 aaPredicted RBP12.27□□□□□ -0.45
CNEP1R1-201ENST00000389134 PPBPP02775 128 aa12.25□□□□□ -0.45
CNEP1R1-201ENST00000389134 SMIM27A0A1W2PRY6 76 aa12.24□□□□□ -0.45
CNEP1R1-201ENST00000389134 F8VRH5 84 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms