RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 PPIP5K1Q6PFW1 1433 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 HEPN1Q6WQI6 88 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 AKAP14Q86UN6 197 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TAC4Q86UU9 113 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TCTE3Q8IZS6 198 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TMEM263Q8WUH6 116 aaKnown RBP-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 LINC01600Q96MT4 127 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 IFT140Q96RY7 1462 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 BOLA2Q9H3K6 86 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 SAR1AQ9NR31 198 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 GID8Q9NWU2 228 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 TMEM2Q9UHN6 1383 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 ATPIF1Q9UII2 106 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 LINC01558Q9Y6Z2 57 aa-1.02□□□□□ -2.57
SNORD28-201ENST00000384706 ACACBO00763 2458 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 DNHD1Q96M86 4753 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 ARAP2Q8WZ64 1704 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 CICQ96RK0 1608 aaPredicted RBP-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 TRIOO75962 3097 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 CCDC141Q6ZP82 1450 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 TRAV36DV7A0A075B6V5 113 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 TRAV30A0A087WSZ9 112 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 H0YAA0 97 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 I3L3M4 83 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 NDUFB6O95139 128 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 TNFSF15O95150 251 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 SFT2D2O95562 160 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 CMPK1P30085 196 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 DEFB1P60022 68 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 B2MP61769 119 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 RRAS2P62070 204 aaPredicted RBP-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 Q6ZUT4 128 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 DYNLRB1Q9NP97 96 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 COL12A1Q99715 3063 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 CMYA5Q8N3K9 4069 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 NBEAQ8NFP9 2946 aa-1.03□□□□□ -2.57
SNORD28-201ENST00000384706 A0A0G2JMZ2 1700 aa-1.03□□□□□ -2.58
SNORD28-201ENST00000384706 MARF1Q9Y4F3 1742 aaKnown RBP-1.03□□□□□ -2.58
SNORD28-201ENST00000384706 DNAH11Q96DT5 4516 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 ROCK1Q13464 1354 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 FAM236AA0A1B0GUQ0 79 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 FAM236BA0A1B0GV22 79 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 K7EP34 96 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 HMGN4O00479 90 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 SCTP09683 121 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 BTG2P78543 158 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 HIST1H1AQ02539 215 aaPredicted RBP-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 TMEM128Q5BJH2 165 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 LELP1Q5T871 98 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 TOMM20LQ6UXN7 152 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 WFDC13Q8IUB5 93 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 PCBD2Q9H0N5 130 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 CDC42SE2Q9NRR3 84 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 FAIMQ9NVQ4 179 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 HIGD1AQ9Y241 93 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 CDK5RAP2Q96SN8 1893 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 SPEF2Q9C093 1822 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 NBEAL2Q6ZNJ1 2754 aa-1.04□□□□□ -2.58
SNORD28-201ENST00000384706 ZNF518AQ6AHZ1 1483 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 ANKRD30AQ9BXX3 1397 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 ANK3Q12955 4377 aaKnown RBP-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 XRN1Q8IZH2 1706 aaKnown RBP-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 SEC11AP67812 179 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 MMGT1Q8N4V1 131 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 LCN9Q8WX39 176 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 CHMP6Q96FZ7 201 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 FAM167A-AS1Q96KT0 104 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 MGST2Q99735 147 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 C1orf167Q5SNV9 1468 aa-1.05□□□□□ -2.58
SNORD28-201ENST00000384706 PRG4Q92954 1404 aaPredicted RBP-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 MYH7P12883 1935 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 PIGBOS1A0A0B4J2F0 54 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 A0A1B0GX51 115 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 TMEM238C9JI98 176 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 IGLC1P0CG04 106 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 S100GP29377 79 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 RPS28P62857 69 aaKnown RBP-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 TFAMQ00059 246 aaKnown RBP-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 TSLPQ969D9 159 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 SPRR4Q96PI1 79 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 MRPL34Q9BQ48 92 aaKnown RBP-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 PRO1933Q9H354 126 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 CDKN2A-AS1Q9UH64 79 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 S4R3F8 94 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 PSME4Q14997 1843 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 KNDC1Q76NI1 1749 aa-1.06□□□□□ -2.58
SNORD28-201ENST00000384706 MYOM1P52179 1685 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 QRICH2Q9H0J4 1663 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 ZFHX3Q15911 3703 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 ARHGEF5Q12774 1597 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 LOC100130705A0A1B0GUX0 176 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 LOC285095A0A1B0GVY8 99 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 CCL22O00626 93 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 HIST1H1DP16402 221 aaKnown RBP-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 G0S2P27469 103 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 WHAMMP3Q1A5X7 153 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 DEFB110Q30KQ9 67 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 MRPL54Q6P161 138 aaKnown RBP-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 FAM223AQ8IWN6 122 aa-1.07□□□□□ -2.58
SNORD28-201ENST00000384706 SKA2Q8WVK7 121 aaPredicted RBP-1.07□□□□□ -2.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms