RNA–Protein interactions for RNA: ENST00000381209.7

RPAIN-203, Transcript of RPA interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPAIN, Length 1,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-203ENST00000381209 H3BUT2 72 aa11.96□□□□□ -0.49
RPAIN-203ENST00000381209 K7ERJ3 54 aa11.96□□□□□ -0.49
RPAIN-203ENST00000381209 RBX1P62877 108 aa11.96□□□□□ -0.49
RPAIN-203ENST00000381209 NDUFA1O15239 70 aa11.96□□□□□ -0.5
RPAIN-203ENST00000381209 HTN3P15516 51 aa11.96□□□□□ -0.5
RPAIN-203ENST00000381209 TIMM17BO60830 172 aa11.95□□□□□ -0.5
RPAIN-203ENST00000381209 H3BNG1 76 aa11.94□□□□□ -0.5
RPAIN-203ENST00000381209 LITAFQ99732 161 aa11.94□□□□□ -0.5
RPAIN-203ENST00000381209 LINC00959A0A1B0GUT2 108 aa11.93□□□□□ -0.5
RPAIN-203ENST00000381209 A0A1W2PPM0 123 aa11.93□□□□□ -0.5
RPAIN-203ENST00000381209 CCL25O15444 150 aa11.93□□□□□ -0.5
RPAIN-203ENST00000381209 SPANXDQ9BXN6 97 aa11.93□□□□□ -0.5
RPAIN-203ENST00000381209 SPANXCQ9NY87 97 aa11.93□□□□□ -0.5
RPAIN-203ENST00000381209 IGHV3OR16-9A0A0B4J2B5 98 aa11.92□□□□□ -0.5
RPAIN-203ENST00000381209 IGLL5B9A064 214 aa11.92□□□□□ -0.5
RPAIN-203ENST00000381209 LELP1Q5T871 98 aa11.92□□□□□ -0.5
RPAIN-203ENST00000381209 FABP2P12104 132 aa11.91□□□□□ -0.5
RPAIN-203ENST00000381209 RPL24P83731 157 aaKnown RBP11.91□□□□□ -0.5
RPAIN-203ENST00000381209 IGKV3OR2-268A0A0C4DH90 116 aa11.91□□□□□ -0.5
RPAIN-203ENST00000381209 SS18Q15532 418 aa11.91□□□□□ -0.5
RPAIN-203ENST00000381209 GTF2H5Q6ZYL4 71 aa11.91□□□□□ -0.5
RPAIN-203ENST00000381209 NAA38Q9BRA0 125 aaKnown RBP11.91□□□□□ -0.5
RPAIN-203ENST00000381209 GAGE10A6NGK3 116 aa11.9□□□□□ -0.5
RPAIN-203ENST00000381209 MUSTN1Q8IVN3 82 aa11.9□□□□□ -0.5
RPAIN-203ENST00000381209 Q9H8V8 135 aa11.9□□□□□ -0.5
RPAIN-203ENST00000381209 A0A087WZ39 114 aa11.89□□□□□ -0.51
RPAIN-203ENST00000381209 K7EP34 96 aa11.89□□□□□ -0.51
RPAIN-203ENST00000381209 HERV-K104P63124 156 aa11.89□□□□□ -0.51
RPAIN-203ENST00000381209 MIAQ16674 131 aa11.89□□□□□ -0.51
RPAIN-203ENST00000381209 ZNF625Q96I27 306 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-203ENST00000381209 CIRBPQ14011 172 aaKnown RBP11.88□□□□□ -0.51
RPAIN-203ENST00000381209 KPRPQ5T749 579 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-203ENST00000381209 LINC01561Q8N1V8 128 aa11.88□□□□□ -0.51
RPAIN-203ENST00000381209 NBEAL2Q6ZNJ1 2754 aa11.88□□□□□ -0.51
RPAIN-203ENST00000381209 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.87□□□□□ -0.51
RPAIN-203ENST00000381209 A0A0J9YWU9 116 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 A4D1N5 150 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 CFC1BP0CG36 223 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 CFC1P0CG37 223 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 IFITM1P13164 125 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 ADAMTSL4-AS1Q5T5F5 129 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 Q6ZTC4 211 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 SPATA25Q9BR10 227 aa11.87□□□□□ -0.51
RPAIN-203ENST00000381209 APOMO95445 188 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 SPCS1Q9Y6A9 102 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 STAB1Q9NY15 2570 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 A0A0B4J2C4 111 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 LYPD5Q6UWN5 251 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 PGPEP1Q9NXJ5 209 aa11.86□□□□□ -0.51
RPAIN-203ENST00000381209 K7EIL1 84 aa11.85□□□□□ -0.51
RPAIN-203ENST00000381209 PRSS2P07478 247 aa11.85□□□□□ -0.51
RPAIN-203ENST00000381209 LINC00269Q8N2A0 174 aa11.85□□□□□ -0.51
RPAIN-203ENST00000381209 C11orf45Q8TAV5 145 aa11.85□□□□□ -0.51
RPAIN-203ENST00000381209 ANGP03950 147 aaKnown RBP11.84□□□□□ -0.51
RPAIN-203ENST00000381209 C5orf38Q86SI9 138 aa11.84□□□□□ -0.51
RPAIN-203ENST00000381209 TM2D3Q9BRN9 247 aa11.84□□□□□ -0.51
RPAIN-203ENST00000381209 PRO1854Q9UHT4 67 aa11.84□□□□□ -0.51
RPAIN-203ENST00000381209 CMYA5Q8N3K9 4069 aa11.84□□□□□ -0.51
RPAIN-203ENST00000381209 XCL1P47992 114 aa11.83□□□□□ -0.52
RPAIN-203ENST00000381209 SFTA2Q6UW10 78 aa11.83□□□□□ -0.52
RPAIN-203ENST00000381209 DNAH3Q8TD57 4116 aa11.82□□□□□ -0.52
RPAIN-203ENST00000381209 TSPAN13O95857 204 aa11.82□□□□□ -0.52
RPAIN-203ENST00000381209 REG3AQ06141 175 aa11.82□□□□□ -0.52
RPAIN-203ENST00000381209 CD164L2Q6UWJ8 174 aa11.82□□□□□ -0.52
RPAIN-203ENST00000381209 COPS9Q8WXC6 57 aa11.82□□□□□ -0.52
RPAIN-203ENST00000381209 PRB2P02812 416 aaPredicted RBP11.81□□□□□ -0.52
RPAIN-203ENST00000381209 NANOS2P60321 138 aaKnown RBP11.81□□□□□ -0.52
RPAIN-203ENST00000381209 CLPSL2Q6UWE3 100 aa11.81□□□□□ -0.52
RPAIN-203ENST00000381209 MEIG1Q5JSS6 88 aa11.81□□□□□ -0.52
RPAIN-203ENST00000381209 PPDPFQ9H3Y8 114 aa11.81□□□□□ -0.52
RPAIN-203ENST00000381209 DEFB131BA0A096LNP1 70 aa11.8□□□□□ -0.52
RPAIN-203ENST00000381209 Q8N3U1 123 aa11.8□□□□□ -0.52
RPAIN-203ENST00000381209 CHCHD10Q8WYQ3 142 aaPredicted RBP11.8□□□□□ -0.52
RPAIN-203ENST00000381209 MDFIQ99750 246 aa11.8□□□□□ -0.52
RPAIN-203ENST00000381209 TOMM7Q9P0U1 55 aa11.8□□□□□ -0.52
RPAIN-203ENST00000381209 EIF4EBP3O60516 100 aaPredicted RBP11.79□□□□□ -0.52
RPAIN-203ENST00000381209 DEFB121Q5J5C9 76 aa11.79□□□□□ -0.52
RPAIN-203ENST00000381209 PRR34Q9NV39 138 aa11.79□□□□□ -0.52
RPAIN-203ENST00000381209 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
RPAIN-203ENST00000381209 LYRM7Q5U5X0 104 aa11.78□□□□□ -0.52
RPAIN-203ENST00000381209 LINC00308Q8TCZ7 52 aa11.78□□□□□ -0.52
RPAIN-203ENST00000381209 COL6A5A8TX70 2615 aa11.78□□□□□ -0.52
RPAIN-203ENST00000381209 COX7A2LO14548 114 aa11.77□□□□□ -0.52
RPAIN-203ENST00000381209 Q8IZM0 81 aa11.77□□□□□ -0.52
RPAIN-203ENST00000381209 ERG28Q9UKR5 140 aa11.77□□□□□ -0.52
RPAIN-203ENST00000381209 DAND5Q8N907 189 aa11.76□□□□□ -0.53
RPAIN-203ENST00000381209 C6orf226Q5I0X4 101 aa11.76□□□□□ -0.53
RPAIN-203ENST00000381209 TRAV10A0A0B4J240 114 aa11.75□□□□□ -0.53
RPAIN-203ENST00000381209 IBA57-AS1B1ANH7 110 aa11.75□□□□□ -0.53
RPAIN-203ENST00000381209 NPC2P61916 151 aa11.75□□□□□ -0.53
RPAIN-203ENST00000381209 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
RPAIN-203ENST00000381209 FOXI1Q12951 378 aa11.74□□□□□ -0.53
RPAIN-203ENST00000381209 MRAPQ8TCY5 172 aa11.74□□□□□ -0.53
RPAIN-203ENST00000381209 ANK2Q01484 3957 aa11.74□□□□□ -0.53
RPAIN-203ENST00000381209 IGLV10-54A0A075B6I4 117 aa11.73□□□□□ -0.53
RPAIN-203ENST00000381209 LOC107984156A0A0G2JMH3 177 aa11.73□□□□□ -0.53
RPAIN-203ENST00000381209 A0A0U1RRA0 63 aa11.73□□□□□ -0.53
RPAIN-203ENST00000381209 ESRGQ1W209 222 aa11.73□□□□□ -0.53
RPAIN-203ENST00000381209 ARL17AQ8IVW1 177 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms