RNA–Protein interactions for RNA: ENST00000380833.8

CLCN4-202, Transcript of chloride voltage-gated channel 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN4, Length 6,750 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-202ENST00000380833 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.95□□□□□ -1.14
CLCN4-202ENST00000380833 LY6LH3BQJ8 138 aa7.95□□□□□ -1.14
CLCN4-202ENST00000380833 BRI3O95415 125 aa7.94□□□□□ -1.14
CLCN4-202ENST00000380833 DAZAP2Q15038 168 aaPredicted RBP7.94□□□□□ -1.14
CLCN4-202ENST00000380833 PRO0461Q9UI25 63 aa7.94□□□□□ -1.14
CLCN4-202ENST00000380833 H0Y9P7 68 aa7.94□□□□□ -1.14
CLCN4-202ENST00000380833 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
CLCN4-202ENST00000380833 LINC01547P58512 204 aaPredicted RBP7.93□□□□□ -1.14
CLCN4-202ENST00000380833 NCOA6Q14686 2063 aaPredicted RBP7.93□□□□□ -1.14
CLCN4-202ENST00000380833 Q6ZSV7 163 aa7.93□□□□□ -1.14
CLCN4-202ENST00000380833 URB1-AS1Q96HZ7 61 aa7.93□□□□□ -1.14
CLCN4-202ENST00000380833 SMCPP49901 116 aaPredicted RBP7.93□□□□□ -1.14
CLCN4-202ENST00000380833 MSMPQ1L6U9 139 aa7.93□□□□□ -1.14
CLCN4-202ENST00000380833 Q6YL49 198 aa7.93□□□□□ -1.14
CLCN4-202ENST00000380833 CCDC140Q96MF4 163 aa7.92□□□□□ -1.14
CLCN4-202ENST00000380833 NUPR2A6NF83 97 aa7.92□□□□□ -1.14
CLCN4-202ENST00000380833 Q8N814 137 aa7.92□□□□□ -1.14
CLCN4-202ENST00000380833 MUC6Q6W4X9 2439 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 KPRPQ5T749 579 aaPredicted RBP7.91□□□□□ -1.14
CLCN4-202ENST00000380833 HIVEP2P31629 2446 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 A0A087WYN8 130 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 IGLV2-14P01704 120 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 PRR15Q8IV56 129 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 TRAV10A0A0B4J240 114 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 DEFB114Q30KQ6 69 aa7.91□□□□□ -1.14
CLCN4-202ENST00000380833 SIP14410 1827 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 SPINK1P00995 79 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 ATP11AUNQ6ZP68 121 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 C2orf48Q96LS8 159 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 TANC1Q9C0D5 1861 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 A0A1B0GU69 56 aa7.9□□□□□ -1.14
CLCN4-202ENST00000380833 FHL2Q14192 279 aa7.9□□□□□ -1.15
CLCN4-202ENST00000380833 OBSL1O75147 1896 aa7.9□□□□□ -1.15
CLCN4-202ENST00000380833 IGFL2Q6UWQ7 119 aa7.89□□□□□ -1.15
CLCN4-202ENST00000380833 TNFRSF13BO14836 293 aaPredicted RBP7.89□□□□□ -1.15
CLCN4-202ENST00000380833 PCOTHQ58A44 107 aa7.89□□□□□ -1.15
CLCN4-202ENST00000380833 DHRS4-AS1Q9P1J3 65 aa7.89□□□□□ -1.15
CLCN4-202ENST00000380833 PTPN13Q12923 2485 aa7.89□□□□□ -1.15
CLCN4-202ENST00000380833 ZNF295-AS1Q8N0V1 137 aa7.89□□□□□ -1.15
CLCN4-202ENST00000380833 CUL9Q8IWT3 2517 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 SYCNQ0VAF6 134 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 C10orf25Q5T742 122 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 K7EMT4 169 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 NOTCH4Q99466 2003 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 COL4A3Q01955 1670 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 NLRC5Q86WI3 1866 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 MED12LQ86YW9 2145 aa7.88□□□□□ -1.15
CLCN4-202ENST00000380833 P0C879 139 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 LINC00474Q9P2X8 69 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 CRIP1P50238 77 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 LMO4P61968 165 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 Q6ZSR3 168 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 SORL1Q92673 2214 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 IGLV5-52A0A0A0MRZ9 124 aa7.87□□□□□ -1.15
CLCN4-202ENST00000380833 NHLRC4P0CG21 123 aaPredicted RBP7.86□□□□□ -1.15
CLCN4-202ENST00000380833 SONP18583 2426 aaKnown RBP7.85□□□□□ -1.15
CLCN4-202ENST00000380833 C9orf116Q5BN46 136 aaPredicted RBP7.85□□□□□ -1.15
CLCN4-202ENST00000380833 A8MUN3 132 aa7.85□□□□□ -1.15
CLCN4-202ENST00000380833 FREM1Q5H8C1 2179 aa7.85□□□□□ -1.15
CLCN4-202ENST00000380833 BDP1A6H8Y1 2624 aa7.85□□□□□ -1.15
CLCN4-202ENST00000380833 NOTCH2Q04721 2471 aa7.85□□□□□ -1.15
CLCN4-202ENST00000380833 Q9UF83 564 aa7.85□□□□□ -1.15
CLCN4-202ENST00000380833 C2orf16Q68DN1 1984 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 PLA2G1BP04054 148 aaKnown RBP7.84□□□□□ -1.15
CLCN4-202ENST00000380833 KIAA1549Q9HCM3 1950 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 M0QY20 66 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 IGLV1-47P01700 117 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 LINC01006Q8NI28 216 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 TRBV6-8A0A0A6YYG3 113 aa7.84□□□□□ -1.15
CLCN4-202ENST00000380833 ZNF106Q9H2Y7 1883 aaKnown RBP7.84□□□□□ -1.15
CLCN4-202ENST00000380833 COX17Q14061 63 aa7.83□□□□□ -1.16
CLCN4-202ENST00000380833 KRTAP10-9P60411 292 aa7.83□□□□□ -1.16
CLCN4-202ENST00000380833 IGLV4-69A0A075B6H9 119 aa7.83□□□□□ -1.16
CLCN4-202ENST00000380833 TSHBP01222 138 aa7.83□□□□□ -1.16
CLCN4-202ENST00000380833 C1orf64Q8NEQ6 169 aa7.83□□□□□ -1.16
CLCN4-202ENST00000380833 PRR14LQ5THK1 2151 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 TMEM131Q92545 1883 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 TSPEAR-AS2P59090 65 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 RBM12B-AS1Q9P1G2 102 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 HCFC1P51610 2035 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 LINC00575Q6W349 94 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 M0R378 163 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 DENND4CQ5VZ89 1909 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 TRBV6-4A0A1B0GX49 114 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 LINC01556Q5JQF7 62 aa7.82□□□□□ -1.16
CLCN4-202ENST00000380833 DEFB116Q30KQ4 102 aa7.81□□□□□ -1.16
CLCN4-202ENST00000380833 ANAPC1Q9H1A4 1944 aa7.81□□□□□ -1.16
CLCN4-202ENST00000380833 IGIPA6NJ69 53 aa7.81□□□□□ -1.16
CLCN4-202ENST00000380833 SMIM29Q86T20 159 aa7.81□□□□□ -1.16
CLCN4-202ENST00000380833 SPG11Q96JI7 2443 aa7.81□□□□□ -1.16
CLCN4-202ENST00000380833 FSHBP01225 129 aa7.8□□□□□ -1.16
CLCN4-202ENST00000380833 C1orf137Q5JT78 98 aa7.8□□□□□ -1.16
CLCN4-202ENST00000380833 MUC7Q8TAX7 377 aa7.8□□□□□ -1.16
CLCN4-202ENST00000380833 IGHV6-1A0A0B4J1U7 121 aa7.8□□□□□ -1.16
CLCN4-202ENST00000380833 DSCAMO60469 2012 aa7.8□□□□□ -1.16
CLCN4-202ENST00000380833 KRTAP27-1Q3LI81 207 aa7.79□□□□□ -1.16
CLCN4-202ENST00000380833 ZNF702PQ9H963 129 aa7.79□□□□□ -1.16
CLCN4-202ENST00000380833 PLXNA2O75051 1894 aa7.79□□□□□ -1.16
CLCN4-202ENST00000380833 HIVEP3Q5T1R4 2406 aa7.79□□□□□ -1.16
CLCN4-202ENST00000380833 C1orf229Q6ZS94 237 aaPredicted RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms