RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 FAM110AQ9BQ89 295 aa12.86□□□□□ -0.35
UBL3-201ENST00000380680 UBE2D1P51668 147 aa12.86□□□□□ -0.35
UBL3-201ENST00000380680 CHCHD10Q8WYQ3 142 aaPredicted RBP12.86□□□□□ -0.35
UBL3-201ENST00000380680 HAMPP81172 84 aa12.85□□□□□ -0.35
UBL3-201ENST00000380680 Q6ZSN1 163 aa12.85□□□□□ -0.35
UBL3-201ENST00000380680 UBL5Q9BZL1 73 aa12.85□□□□□ -0.35
UBL3-201ENST00000380680 IGHV4-28A0A0C4DH34 117 aa12.85□□□□□ -0.35
UBL3-201ENST00000380680 TRIAP1O43715 76 aa12.85□□□□□ -0.35
UBL3-201ENST00000380680 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.85□□□□□ -0.35
UBL3-201ENST00000380680 NCR3O14931 201 aa12.84□□□□□ -0.35
UBL3-201ENST00000380680 MIFP14174 115 aa12.84□□□□□ -0.35
UBL3-201ENST00000380680 TSPEAR-AS2P59090 65 aa12.83□□□□□ -0.36
UBL3-201ENST00000380680 POM121L12Q8N7R1 296 aa12.83□□□□□ -0.36
UBL3-201ENST00000380680 SPTBN5Q9NRC6 3674 aaKnown RBP12.83□□□□□ -0.36
UBL3-201ENST00000380680 HELZ2Q9BYK8 2649 aaKnown RBP12.83□□□□□ -0.36
UBL3-201ENST00000380680 DSCR8Q96T75 97 aa12.83□□□□□ -0.36
UBL3-201ENST00000380680 CDC42SE2Q9NRR3 84 aa12.83□□□□□ -0.36
UBL3-201ENST00000380680 LINC00242Q5T6M2 205 aa12.82□□□□□ -0.36
UBL3-201ENST00000380680 TMEM126AQ9H061 195 aa12.82□□□□□ -0.36
UBL3-201ENST00000380680 F8WEM9 126 aa12.82□□□□□ -0.36
UBL3-201ENST00000380680 LINC00315P59091 139 aa12.82□□□□□ -0.36
UBL3-201ENST00000380680 RBMY1FQ15415 496 aaKnown RBP12.82□□□□□ -0.36
UBL3-201ENST00000380680 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
UBL3-201ENST00000380680 FAM19A4Q96LR4 140 aa12.81□□□□□ -0.36
UBL3-201ENST00000380680 LINC00694P0DN24 101 aa12.81□□□□□ -0.36
UBL3-201ENST00000380680 RPL18AQ02543 176 aaKnown RBP12.81□□□□□ -0.36
UBL3-201ENST00000380680 C11orf45Q8TAV5 145 aa12.81□□□□□ -0.36
UBL3-201ENST00000380680 HIGD2BQ4VC39 106 aa12.8□□□□□ -0.36
UBL3-201ENST00000380680 KLK9Q2XQG4 91 aa12.8□□□□□ -0.36
UBL3-201ENST00000380680 Q8N2B8 174 aa12.8□□□□□ -0.36
UBL3-201ENST00000380680 TEX49A0A1B0GTD5 131 aa12.79□□□□□ -0.36
UBL3-201ENST00000380680 IBA57-AS1B1ANH7 110 aa12.79□□□□□ -0.36
UBL3-201ENST00000380680 BEAN1Q3B7T3 259 aa12.79□□□□□ -0.36
UBL3-201ENST00000380680 ATRQ13535 2644 aa12.79□□□□□ -0.36
UBL3-201ENST00000380680 OXLD1Q5BKU9 147 aa12.79□□□□□ -0.36
UBL3-201ENST00000380680 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
UBL3-201ENST00000380680 ADGRG4Q8IZF6 3080 aa12.78□□□□□ -0.36
UBL3-201ENST00000380680 C16orf95Q9H693 158 aa12.78□□□□□ -0.36
UBL3-201ENST00000380680 ACYP1P07311 99 aa12.78□□□□□ -0.36
UBL3-201ENST00000380680 KIR2DL5BQ8NHK3 375 aa12.77□□□□□ -0.36
UBL3-201ENST00000380680 LINC00959A0A1B0GUT2 108 aa12.77□□□□□ -0.37
UBL3-201ENST00000380680 TIMM17BO60830 172 aa12.77□□□□□ -0.37
UBL3-201ENST00000380680 DEFB105AQ8NG35 78 aa12.76□□□□□ -0.37
UBL3-201ENST00000380680 SPANXDQ9BXN6 97 aa12.76□□□□□ -0.37
UBL3-201ENST00000380680 DEFB131BA0A096LNP1 70 aa12.76□□□□□ -0.37
UBL3-201ENST00000380680 AMELXQ99217 191 aa12.76□□□□□ -0.37
UBL3-201ENST00000380680 LINC00526Q96FQ7 95 aa12.75□□□□□ -0.37
UBL3-201ENST00000380680 DMXL2Q8TDJ6 3036 aa12.74□□□□□ -0.37
UBL3-201ENST00000380680 IGHV4-30-4P0DP06 118 aa12.74□□□□□ -0.37
UBL3-201ENST00000380680 COX6A2Q02221 97 aa12.74□□□□□ -0.37
UBL3-201ENST00000380680 UFSP1Q6NVU6 142 aa12.74□□□□□ -0.37
UBL3-201ENST00000380680 LINC01546A6NGU7 62 aa12.73□□□□□ -0.37
UBL3-201ENST00000380680 C9orf153Q5TBE3 101 aa12.73□□□□□ -0.37
UBL3-201ENST00000380680 SHISA2Q6UWI4 295 aa12.73□□□□□ -0.37
UBL3-201ENST00000380680 SMIM1B2RUZ4 78 aa12.73□□□□□ -0.37
UBL3-201ENST00000380680 C11orf72Q8NBR9 251 aa12.73□□□□□ -0.37
UBL3-201ENST00000380680 TNRC18O15417 2968 aaPredicted RBP12.72□□□□□ -0.37
UBL3-201ENST00000380680 IGLV4-60A0A075B6I1 120 aa12.72□□□□□ -0.37
UBL3-201ENST00000380680 XAGE1AQ9HD64 81 aa12.72□□□□□ -0.37
UBL3-201ENST00000380680 CD164L2Q6UWJ8 174 aa12.72□□□□□ -0.37
UBL3-201ENST00000380680 Q9UF83 564 aa12.72□□□□□ -0.37
UBL3-201ENST00000380680 FHL2Q14192 279 aa12.71□□□□□ -0.37
UBL3-201ENST00000380680 ETDCA0A1B0GVM5 59 aa12.71□□□□□ -0.37
UBL3-201ENST00000380680 IGKV3D-7A0A0C4DH55 119 aa12.71□□□□□ -0.38
UBL3-201ENST00000380680 MGAM2Q2M2H8 2515 aa12.71□□□□□ -0.38
UBL3-201ENST00000380680 CLUHP3Q96NS8 147 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 ATMQ13315 3056 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 DIRC1Q969H9 104 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 FSHBP01225 129 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 ADAMTSL4-AS1Q5T5F5 129 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 C14orf132Q9NPU4 83 aa12.7□□□□□ -0.38
UBL3-201ENST00000380680 KPRPQ5T749 579 aaPredicted RBP12.69□□□□□ -0.38
UBL3-201ENST00000380680 UBE2BP63146 152 aa12.69□□□□□ -0.38
UBL3-201ENST00000380680 MT-ATP8P03928 68 aa12.68□□□□□ -0.38
UBL3-201ENST00000380680 SLPIP03973 132 aa12.68□□□□□ -0.38
UBL3-201ENST00000380680 JMJD7-PLA2G4BH0Y9G9 81 aa12.67□□□□□ -0.38
UBL3-201ENST00000380680 LELP1Q5T871 98 aa12.67□□□□□ -0.38
UBL3-201ENST00000380680 CSDC2Q9Y534 153 aaKnown RBP12.67□□□□□ -0.38
UBL3-201ENST00000380680 LST1O00453 97 aa12.66□□□□□ -0.38
UBL3-201ENST00000380680 IGSF10Q6WRI0 2623 aa12.65□□□□□ -0.38
UBL3-201ENST00000380680 TMEM256-PLSCR3K7ERE1 68 aa12.65□□□□□ -0.38
UBL3-201ENST00000380680 TRACP01848 142 aa12.65□□□□□ -0.38
UBL3-201ENST00000380680 PRB2P02812 416 aaPredicted RBP12.65□□□□□ -0.38
UBL3-201ENST00000380680 FHL3Q13643 280 aa12.65□□□□□ -0.38
UBL3-201ENST00000380680 B5MCH6 92 aa12.65□□□□□ -0.38
UBL3-201ENST00000380680 FLNCQ14315 2725 aa12.64□□□□□ -0.39
UBL3-201ENST00000380680 FAM236AA0A1B0GUQ0 79 aa12.64□□□□□ -0.39
UBL3-201ENST00000380680 FAM236BA0A1B0GV22 79 aa12.64□□□□□ -0.39
UBL3-201ENST00000380680 C6orf99Q4VX62 202 aa12.64□□□□□ -0.39
UBL3-201ENST00000380680 RBM3P98179 157 aaKnown RBP12.63□□□□□ -0.39
UBL3-201ENST00000380680 MYO15AQ9UKN7 3530 aa12.63□□□□□ -0.39
UBL3-201ENST00000380680 A0A087WZ39 114 aa12.62□□□□□ -0.39
UBL3-201ENST00000380680 SPATA25Q9BR10 227 aa12.62□□□□□ -0.39
UBL3-201ENST00000380680 RETNQ9HD89 108 aa12.62□□□□□ -0.39
UBL3-201ENST00000380680 A0A096LNT2 108 aa12.61□□□□□ -0.39
UBL3-201ENST00000380680 COX7BP24311 80 aa12.61□□□□□ -0.39
UBL3-201ENST00000380680 SMIM11BQ8TCY0 68 aa12.61□□□□□ -0.39
UBL3-201ENST00000380680 Q8IZM0 81 aa12.6□□□□□ -0.39
UBL3-201ENST00000380680 hADV29S1A0JD25 119 aa12.6□□□□□ -0.39
UBL3-201ENST00000380680 CHD6Q8TD26 2715 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms