RNA–Protein interactions for RNA: ENST00000380409.2

RIPK1-202, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPK1, Length 3,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-202ENST00000380409 XCL1P47992 114 aa4.82□□□□□ -1.64
RIPK1-202ENST00000380409 BLCAPP62952 87 aa4.82□□□□□ -1.64
RIPK1-202ENST00000380409 XCL2Q9UBD3 114 aa4.82□□□□□ -1.64
RIPK1-202ENST00000380409 Q9UF83 564 aa4.82□□□□□ -1.64
RIPK1-202ENST00000380409 KIF25-AS1Q9Y6Z4 181 aa4.82□□□□□ -1.64
RIPK1-202ENST00000380409 NBEAL1Q6ZS30 2694 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 TIMM17BO60830 172 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 PPP1R17O96001 155 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 MINOS1Q5TGZ0 78 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 RNF5Q99942 180 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 MINOS1-NBL1R4GNA1 71 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 GNRH2O43555 120 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 INAFM2P0DMQ5 153 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 C9orf47Q6ZRZ4 202 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 TRGV2A0A075B6R0 118 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 UBE2L6O14933 153 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 BCE1O60756 84 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 RNASE13Q5GAN3 156 aaKnown RBP4.81□□□□□ -1.64
RIPK1-202ENST00000380409 TMEM243Q9BU79 118 aa4.81□□□□□ -1.64
RIPK1-202ENST00000380409 MUC4Q99102 2169 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 ZFP36P26651 326 aaKnown RBP4.8□□□□□ -1.64
RIPK1-202ENST00000380409 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 FAM218AQ96MZ4 157 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 IBA57-AS1B1ANH7 110 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 DEFB131AP59861 70 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 C9orf129Q5T035 196 aaKnown RBP4.8□□□□□ -1.64
RIPK1-202ENST00000380409 KAAG1Q9UBP8 84 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 C19orf84I3L1E1 186 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 IGF1P05019 195 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 CD28P10747 220 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 RPL28P46779 137 aaKnown RBP4.8□□□□□ -1.64
RIPK1-202ENST00000380409 C11orf68Q9H3H3 251 aaKnown RBP4.8□□□□□ -1.64
RIPK1-202ENST00000380409 HIVEP1P15822 2718 aa4.8□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV3-38A0A0C4DH36 116 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 ADARB2-AS1A8MUL3 147 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 CTSGP08311 255 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 MED14OSP0DP75 135 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 RPL39P62891 51 aaKnown RBP4.79□□□□□ -1.64
RIPK1-202ENST00000380409 DEFB136Q30KP8 78 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV7-81A0A0B4J1V7 117 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGLV1-47P01700 117 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 VSIG2Q96IQ7 327 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 LINC00474Q9P2X8 69 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 COL6A5A8TX70 2615 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGHG2P01859 326 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV3-30-3P0DP02 117 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV4-38-2P0DP08 117 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 BRK1Q8WUW1 75 aa4.79□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV4-61A0A0C4DH41 118 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 B4DSR2 109 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 CCKP06307 115 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 TRBV27A0A0K0K1C4 114 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 TRGV1A0A0A0MS02 117 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 SOCS3O14543 225 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 IGHV4-59P01825 116 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 MSMBP08118 114 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 PRR9Q5T870 116 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 FANCD2OSQ96PS1 177 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 FBN2P35556 2912 aa4.78□□□□□ -1.64
RIPK1-202ENST00000380409 TRBV6-5A0A0K0K1A5 114 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 SS18Q15532 418 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 PRR26Q8N8Z3 221 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 TRBV10-3A0A0K0K1G6 114 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 TRBV12-3P01733 135 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 KRTAP10-9P60411 292 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 CIRBPQ14011 172 aaKnown RBP4.77□□□□□ -1.65
RIPK1-202ENST00000380409 IGKV3D-7A0A0C4DH55 119 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 GHRHP01286 108 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 BAALC-AS2P0C853 105 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 HILS1P60008 231 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 FAM229BQ4G0N7 80 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 ATP5EP2Q5VTU8 51 aa4.77□□□□□ -1.65
RIPK1-202ENST00000380409 OTOGQ6ZRI0 2925 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 IGLV11-55A0A075B6I3 123 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 IGHV4-30-2A0A087WSY4 118 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 SERTAD4-AS1Q5TG53 156 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 Q8N9W7 124 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 IGHV1-58A0A0C4DH39 117 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 VCYO14598 125 aa4.76□□□□□ -1.65
RIPK1-202ENST00000380409 ATP5EP56381 51 aaPredicted RBP4.76□□□□□ -1.65
RIPK1-202ENST00000380409 UNQ9165/PRO28630Q6UXU0 137 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 CUBNO60494 3623 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 TRGV4A0A0C4DH28 118 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1BA6NDE4 496 aaKnown RBP4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1EA6NEQ0 496 aaKnown RBP4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1DP0C7P1 496 aaKnown RBP4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1A1P0DJD3 496 aaKnown RBP4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1CP0DJD4 496 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 DEFB130BP0DP73 79 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 DEFB130AP0DP74 79 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 VPREB1P12018 145 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 RBMY1FQ15415 496 aaKnown RBP4.75□□□□□ -1.65
RIPK1-202ENST00000380409 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 DEFB112Q30KQ8 113 aa4.75□□□□□ -1.65
RIPK1-202ENST00000380409 MRPL55Q7Z7F7 128 aaKnown RBP4.74□□□□□ -1.65
RIPK1-202ENST00000380409 USMG5Q96IX5 58 aa4.74□□□□□ -1.65
RIPK1-202ENST00000380409 VPS13CQ709C8 3753 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 195.8 ms