RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 HIST2H2BCQ6DN03 193 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 HIST2H2BDQ6DRA6 164 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 DOPEY1Q5JWR5 2465 aa6.77□□□□□ -1.33
PTPRA-204ENST00000380393 CD28P10747 220 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 USP9YO00507 2555 aaPredicted RBP6.76□□□□□ -1.33
PTPRA-204ENST00000380393 PRR9Q5T870 116 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 MIR7-3HGQ8N6C7 128 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 ZFHX3Q15911 3703 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 A0A087WWL8 130 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 DEFB1P60022 68 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 BSPH1Q075Z2 132 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 RNASE13Q5GAN3 156 aaKnown RBP6.76□□□□□ -1.33
PTPRA-204ENST00000380393 VMO1Q7Z5L0 202 aa6.76□□□□□ -1.33
PTPRA-204ENST00000380393 ECSCRQ19T08 205 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 CLEC19AQ6UXS0 136 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 PSPHP1O15172 72 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 UNQ9165/PRO28630Q6UXU0 137 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 C20orf203Q8NBC4 194 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 IGHV1OR15-1A0A075B7D0 117 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 LRCOL1A6NCL2 159 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 F6UB75 175 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 IGF1P05019 195 aa6.75□□□□□ -1.33
PTPRA-204ENST00000380393 MUC4Q99102 2169 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 LECT2O14960 151 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 DOPEY2Q9Y3R5 2298 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 FAM74A4Q5TZK3 123 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 PF4P02776 101 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 SLPIP03973 132 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 FUSP35637 526 aaKnown RBP eCLIP6.74□□□□□ -1.33
PTPRA-204ENST00000380393 DGAT2L7PQ6IED9 249 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 FBN2P35556 2912 aa6.74□□□□□ -1.33
PTPRA-204ENST00000380393 KMT2BQ9UMN6 2715 aaPredicted RBP6.73□□□□□ -1.33
PTPRA-204ENST00000380393 LINC00315P59091 139 aa6.73□□□□□ -1.33
PTPRA-204ENST00000380393 UBR5O95071 2799 aaPredicted RBP6.73□□□□□ -1.33
PTPRA-204ENST00000380393 GNRH2O43555 120 aa6.73□□□□□ -1.33
PTPRA-204ENST00000380393 CRPP02741 224 aa6.73□□□□□ -1.33
PTPRA-204ENST00000380393 DYNLRB2Q8TF09 96 aa6.73□□□□□ -1.33
PTPRA-204ENST00000380393 Q9H8V8 135 aa6.73□□□□□ -1.33
PTPRA-204ENST00000380393 GCN1Q92616 2671 aaKnown RBP6.73□□□□□ -1.33
PTPRA-204ENST00000380393 C19orf84I3L1E1 186 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 NDUFA1O15239 70 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 LY6HO94772 140 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 IGLV1-47P01700 117 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 CTSGP08311 255 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 CREBBPQ92793 2442 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 TMEM254Q8TBM7 123 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 C11orf72Q8NBR9 251 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 HECTD1Q9ULT8 2610 aa6.72□□□□□ -1.33
PTPRA-204ENST00000380393 NOTCH2Q04721 2471 aa6.71□□□□□ -1.33
PTPRA-204ENST00000380393 TRBV7-4A0A0J9YYF1 115 aa6.71□□□□□ -1.33
PTPRA-204ENST00000380393 CLPSL1A2RUU4 121 aa6.71□□□□□ -1.33
PTPRA-204ENST00000380393 HAMPP81172 84 aa6.71□□□□□ -1.33
PTPRA-204ENST00000380393 ORMDL1Q9P0S3 153 aa6.71□□□□□ -1.33
PTPRA-204ENST00000380393 M0R378 163 aa6.71□□□□□ -1.34
PTPRA-204ENST00000380393 IGLV11-55A0A075B6I3 123 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 E7EQL1 145 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 F8W735 103 aaPredicted RBP6.7□□□□□ -1.34
PTPRA-204ENST00000380393 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 DPM3Q9P2X0 92 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 RNASE3P12724 160 aaKnown RBP6.7□□□□□ -1.34
PTPRA-204ENST00000380393 ZNF843Q8N446 348 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 CCDC140Q96MF4 163 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 TRBV6-5A0A0K0K1A5 114 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 IGKV2-29A2NJV5 120 aaPredicted RBP6.7□□□□□ -1.34
PTPRA-204ENST00000380393 Q6ZRP5 223 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 CCDC168Q8NDH2 2452 aa6.7□□□□□ -1.34
PTPRA-204ENST00000380393 H0YGX0 51 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 MED14OSP0DP75 135 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 RPL36AP83881 106 aaKnown RBP6.69□□□□□ -1.34
PTPRA-204ENST00000380393 RPL36ALQ969Q0 106 aaKnown RBP6.69□□□□□ -1.34
PTPRA-204ENST00000380393 ZANQ9Y493 2812 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 A8MU10 97 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 K7EMT4 169 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 Q8N6K4 173 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 LINC00588Q9Y4M8 146 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 A0A1W2PPR1 153 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 C8orf87E5RJ46 101 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 NREPQ16612 68 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 Q1T7F1 81 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 Q8N3U1 123 aa6.69□□□□□ -1.34
PTPRA-204ENST00000380393 ITLN2Q8WWU7 325 aaPredicted RBP6.69□□□□□ -1.34
PTPRA-204ENST00000380393 PRYO14603 147 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 Q6ZTI0 123 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 SMIM11BQ8TCY0 68 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 CDKN2A-AS1Q9UH64 79 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 JMJD7-PLA2G4BH0Y9G9 81 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 UBE2BP63146 152 aa6.68□□□□□ -1.34
PTPRA-204ENST00000380393 LINC01547P58512 204 aaPredicted RBP6.67□□□□□ -1.34
PTPRA-204ENST00000380393 SPTSSBQ8NFR3 76 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 G3V318 75 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 Q6ZTC4 211 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 LINC00337Q8N6G1 96 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 ZFAND2AQ8N6M9 145 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 ITPR2Q14571 2701 aa6.67□□□□□ -1.34
PTPRA-204ENST00000380393 ZNF73O43830 326 aaPredicted RBP6.67□□□□□ -1.34
PTPRA-204ENST00000380393 NOTCH3Q9UM47 2321 aa6.66□□□□□ -1.34
PTPRA-204ENST00000380393 Q6ZVQ6 151 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms