RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 RNASE13Q5GAN3 156 aaKnown RBP9.31□□□□□ -0.92
UPK1A-202ENST00000379013 C1orf134Q5TEV5 83 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 ENHOQ6UWT2 76 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 C6orf223Q8N319 242 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 OPRPNQ99935 248 aaPredicted RBP9.31□□□□□ -0.92
UPK1A-202ENST00000379013 CST9LQ9H4G1 147 aa9.31□□□□□ -0.92
UPK1A-202ENST00000379013 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
UPK1A-202ENST00000379013 UBE2D1P51668 147 aa9.3□□□□□ -0.92
UPK1A-202ENST00000379013 CD164L2Q6UWJ8 174 aa9.3□□□□□ -0.92
UPK1A-202ENST00000379013 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 LINC00173Q6ZV60 143 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 FAM19A3Q7Z5A8 133 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 SPATA12Q7Z6I5 190 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 CHCHD10Q8WYQ3 142 aaPredicted RBP9.29□□□□□ -0.92
UPK1A-202ENST00000379013 HIST1H2BLQ99880 126 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 KRTAP1-5Q9BYS1 174 aa9.29□□□□□ -0.92
UPK1A-202ENST00000379013 IGLV10-54A0A075B6I4 117 aa9.28□□□□□ -0.92
UPK1A-202ENST00000379013 TINCRA0A1B0GVN0 87 aa9.28□□□□□ -0.92
UPK1A-202ENST00000379013 F8VRH5 84 aa9.28□□□□□ -0.92
UPK1A-202ENST00000379013 H0Y8G0 127 aa9.28□□□□□ -0.92
UPK1A-202ENST00000379013 PLNP26678 52 aa9.28□□□□□ -0.92
UPK1A-202ENST00000379013 CHTOPQ9Y3Y2 248 aaKnown RBP9.28□□□□□ -0.92
UPK1A-202ENST00000379013 H3BRM9 83 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 SYS1-DBNDD2H3BUS1 97 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 APOMO95445 188 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 XCL1P47992 114 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 TNP2Q05952 138 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 CFAP161Q6P656 301 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 FAM104AQ969W3 186 aa9.27□□□□□ -0.93
UPK1A-202ENST00000379013 COX7A2LO14548 114 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 IGLC3P0DOY3 106 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 MALP21145 153 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 KRTDAPP60985 99 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 CHAC1Q9BUX1 264 aa9.26□□□□□ -0.93
UPK1A-202ENST00000379013 GAGE12HA6NDE8 117 aa9.25□□□□□ -0.93
UPK1A-202ENST00000379013 EREGO14944 169 aa9.25□□□□□ -0.93
UPK1A-202ENST00000379013 LINC00242Q5T6M2 205 aa9.25□□□□□ -0.93
UPK1A-202ENST00000379013 LINC01561Q8N1V8 128 aa9.25□□□□□ -0.93
UPK1A-202ENST00000379013 DPM2O94777 84 aa9.24□□□□□ -0.93
UPK1A-202ENST00000379013 C3orf79P0CE67 100 aa9.24□□□□□ -0.93
UPK1A-202ENST00000379013 ODF1Q14990 250 aa9.24□□□□□ -0.93
UPK1A-202ENST00000379013 LINC00469Q8N7U9 141 aa9.24□□□□□ -0.93
UPK1A-202ENST00000379013 IGHV3OR16-9A0A0B4J2B5 98 aa9.23□□□□□ -0.93
UPK1A-202ENST00000379013 A0A0J9YXV3 536 aa9.23□□□□□ -0.93
UPK1A-202ENST00000379013 ZC2HC1BQ5TFG8 222 aa9.23□□□□□ -0.93
UPK1A-202ENST00000379013 LINC01545Q5VT33 79 aa9.23□□□□□ -0.93
UPK1A-202ENST00000379013 MRPL35Q9NZE8 188 aaKnown RBP9.23□□□□□ -0.93
UPK1A-202ENST00000379013 FAT1Q14517 4588 aa9.23□□□□□ -0.93
UPK1A-202ENST00000379013 IGLV5-45A0A087WSX0 123 aa9.22□□□□□ -0.93
UPK1A-202ENST00000379013 A0A087WZ39 114 aa9.22□□□□□ -0.93
UPK1A-202ENST00000379013 IGKCP01834 107 aa9.22□□□□□ -0.93
UPK1A-202ENST00000379013 HERVK_113P61574 105 aa9.22□□□□□ -0.93
UPK1A-202ENST00000379013 FOXI1Q12951 378 aa9.22□□□□□ -0.93
UPK1A-202ENST00000379013 IGLV4-69A0A075B6H9 119 aa9.21□□□□□ -0.94
UPK1A-202ENST00000379013 IGHV1-58A0A0C4DH39 117 aa9.21□□□□□ -0.94
UPK1A-202ENST00000379013 TMEM170BQ5T4T1 132 aa9.21□□□□□ -0.94
UPK1A-202ENST00000379013 OR10D4PQ8NGN7 298 aa9.21□□□□□ -0.94
UPK1A-202ENST00000379013 KRTAP4-5Q9BYR2 181 aa9.21□□□□□ -0.94
UPK1A-202ENST00000379013 Q6ZRN7 208 aaPredicted RBP9.2□□□□□ -0.94
UPK1A-202ENST00000379013 C11orf86A6NJI1 115 aa9.19□□□□□ -0.94
UPK1A-202ENST00000379013 KRTAP26-1Q6PEX3 210 aa9.19□□□□□ -0.94
UPK1A-202ENST00000379013 C5orf38Q86SI9 138 aa9.19□□□□□ -0.94
UPK1A-202ENST00000379013 CDKN2A-AS1Q9UH64 79 aa9.19□□□□□ -0.94
UPK1A-202ENST00000379013 DNAH8Q96JB1 4490 aa9.18□□□□□ -0.94
UPK1A-202ENST00000379013 F8WDY8 70 aa9.18□□□□□ -0.94
UPK1A-202ENST00000379013 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
UPK1A-202ENST00000379013 PRSS2P07478 247 aa9.18□□□□□ -0.94
UPK1A-202ENST00000379013 ZNF22P17026 224 aaPredicted RBP9.18□□□□□ -0.94
UPK1A-202ENST00000379013 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
UPK1A-202ENST00000379013 IGHV3-64A0A075B6Q5 118 aa9.17□□□□□ -0.94
UPK1A-202ENST00000379013 HSBP1L1C9JCN9 74 aa9.17□□□□□ -0.94
UPK1A-202ENST00000379013 USP17L23D6RBM5 183 aa9.17□□□□□ -0.94
UPK1A-202ENST00000379013 SCGB1D1O95968 90 aa9.17□□□□□ -0.94
UPK1A-202ENST00000379013 COX6A2Q02221 97 aa9.17□□□□□ -0.94
UPK1A-202ENST00000379013 CXCL5P42830 114 aa9.16□□□□□ -0.94
UPK1A-202ENST00000379013 ORAOV1Q8WV07 137 aa9.16□□□□□ -0.94
UPK1A-202ENST00000379013 GVQW2A0A096LPI5 108 aaPredicted RBP9.15□□□□□ -0.94
UPK1A-202ENST00000379013 KRTAP10-2P60368 255 aa9.15□□□□□ -0.94
UPK1A-202ENST00000379013 Q8IZM0 81 aa9.15□□□□□ -0.94
UPK1A-202ENST00000379013 PMCHL2Q9BQD1 86 aa9.15□□□□□ -0.94
UPK1A-202ENST00000379013 PKIGQ9Y2B9 76 aa9.15□□□□□ -0.94
UPK1A-202ENST00000379013 A0A087WTM6 91 aa9.14□□□□□ -0.95
UPK1A-202ENST00000379013 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.14□□□□□ -0.95
UPK1A-202ENST00000379013 hDV102S1A0JD36 115 aa9.14□□□□□ -0.95
UPK1A-202ENST00000379013 TMEM223A0PJW6 202 aa9.14□□□□□ -0.95
UPK1A-202ENST00000379013 SMIM1B2RUZ4 78 aa9.14□□□□□ -0.95
UPK1A-202ENST00000379013 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.95
UPK1A-202ENST00000379013 SPAG11BQ08648 103 aa9.14□□□□□ -0.95
UPK1A-202ENST00000379013 LRCOL1A6NCL2 159 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 CKS1BP61024 79 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 C6orf226Q5I0X4 101 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 C15orf56Q8N910 161 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 NTN5Q8WTR8 489 aaPredicted RBP9.13□□□□□ -0.95
UPK1A-202ENST00000379013 PLEKHB2Q96CS7 222 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 C2orf48Q96LS8 159 aa9.13□□□□□ -0.95
UPK1A-202ENST00000379013 IGLV5-39A0A0G2JS06 123 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms