RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 GVQW2A0A096LPI5 108 aaPredicted RBP12.19□□□□□ -0.46
SSU72-203ENST00000378725 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.19□□□□□ -0.46
SSU72-203ENST00000378725 KRTAP10-1P60331 282 aa12.19□□□□□ -0.46
SSU72-203ENST00000378725 COX6A2Q02221 97 aa12.19□□□□□ -0.46
SSU72-203ENST00000378725 C5orf38Q86SI9 138 aa12.19□□□□□ -0.46
SSU72-203ENST00000378725 SLPIP03973 132 aa12.18□□□□□ -0.46
SSU72-203ENST00000378725 LINC00310P59036 64 aa12.18□□□□□ -0.46
SSU72-203ENST00000378725 CNBPP62633 177 aaKnown RBP12.18□□□□□ -0.46
SSU72-203ENST00000378725 CST9LQ9H4G1 147 aa12.18□□□□□ -0.46
SSU72-203ENST00000378725 DNAH5Q8TE73 4624 aa12.17□□□□□ -0.46
SSU72-203ENST00000378725 MALP21145 153 aa12.17□□□□□ -0.46
SSU72-203ENST00000378725 PMVKQ15126 192 aa12.17□□□□□ -0.46
SSU72-203ENST00000378725 HSBP1O75506 76 aa12.16□□□□□ -0.46
SSU72-203ENST00000378725 SERF1AO75920 110 aa12.16□□□□□ -0.46
SSU72-203ENST00000378725 ATP5LO75964 103 aa12.16□□□□□ -0.46
SSU72-203ENST00000378725 SEC11AP67812 179 aa12.16□□□□□ -0.46
SSU72-203ENST00000378725 HIGD2BQ4VC39 106 aa12.16□□□□□ -0.46
SSU72-203ENST00000378725 A0A087WZ39 114 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BKO60814 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 APOMO95445 188 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BJP06899 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BOP23527 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BBP33778 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BDP58876 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BCP62807 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST2H2BEQ16778 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.15□□□□□ -0.46
SSU72-203ENST00000378725 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BHQ93079 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BNQ99877 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 HIST1H2BMQ99879 126 aa12.15□□□□□ -0.46
SSU72-203ENST00000378725 NUPR1O60356 82 aa12.14□□□□□ -0.47
SSU72-203ENST00000378725 LINC01561Q8N1V8 128 aa12.14□□□□□ -0.47
SSU72-203ENST00000378725 IGHV3-64A0A075B6Q5 118 aa12.13□□□□□ -0.47
SSU72-203ENST00000378725 A0A0J9YXV3 536 aa12.13□□□□□ -0.47
SSU72-203ENST00000378725 HERVK_113P63121 156 aa12.13□□□□□ -0.47
SSU72-203ENST00000378725 FAM19A2Q8N3H0 131 aa12.13□□□□□ -0.47
SSU72-203ENST00000378725 TINCRA0A1B0GVN0 87 aa12.12□□□□□ -0.47
SSU72-203ENST00000378725 ZNF561-AS1K7EIQ3 104 aa12.12□□□□□ -0.47
SSU72-203ENST00000378725 CDK2AP2O75956 126 aa12.12□□□□□ -0.47
SSU72-203ENST00000378725 LINC01620Q4KN68 170 aa12.12□□□□□ -0.47
SSU72-203ENST00000378725 LRP1BQ9NZR2 4599 aa12.12□□□□□ -0.47
SSU72-203ENST00000378725 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.11□□□□□ -0.47
SSU72-203ENST00000378725 OR10D4PQ8NGN7 298 aa12.11□□□□□ -0.47
SSU72-203ENST00000378725 GEMIN7Q9H840 131 aaKnown RBP12.11□□□□□ -0.47
SSU72-203ENST00000378725 IGLV4-69A0A075B6H9 119 aa12.1□□□□□ -0.47
SSU72-203ENST00000378725 IFI27L1Q96BM0 104 aa12.1□□□□□ -0.47
SSU72-203ENST00000378725 LINC00526Q96FQ7 95 aa12.1□□□□□ -0.47
SSU72-203ENST00000378725 IGLV5-45A0A087WSX0 123 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 NDUFA6P56556 154 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 ORAOV1Q8WV07 137 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 C2orf48Q96LS8 159 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 FAM30AQ9NZY2 134 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 CDKN2A-AS1Q9UH64 79 aa12.09□□□□□ -0.47
SSU72-203ENST00000378725 SPAG11BQ08648 103 aa12.08□□□□□ -0.48
SSU72-203ENST00000378725 SDIM1Q6ZPB5 146 aa12.08□□□□□ -0.48
SSU72-203ENST00000378725 Q6ZSA8 131 aa12.08□□□□□ -0.48
SSU72-203ENST00000378725 F8WDY8 70 aa12.07□□□□□ -0.48
SSU72-203ENST00000378725 IGLC3P0DOY3 106 aa12.07□□□□□ -0.48
SSU72-203ENST00000378725 KIAA0087Q14695 138 aa12.07□□□□□ -0.48
SSU72-203ENST00000378725 TRAV12-1A0A0B4J245 112 aa12.06□□□□□ -0.48
SSU72-203ENST00000378725 LEPROTL1O95214 131 aa12.06□□□□□ -0.48
SSU72-203ENST00000378725 XGP55808 180 aa12.06□□□□□ -0.48
SSU72-203ENST00000378725 SYCNQ0VAF6 134 aa12.06□□□□□ -0.48
SSU72-203ENST00000378725 COA6Q5JTJ3 125 aaKnown RBP12.06□□□□□ -0.48
SSU72-203ENST00000378725 LINC00469Q8N7U9 141 aa12.05□□□□□ -0.48
SSU72-203ENST00000378725 CARD19Q96LW7 228 aa12.05□□□□□ -0.48
SSU72-203ENST00000378725 CAMK2N2Q96S95 79 aa12.04□□□□□ -0.48
SSU72-203ENST00000378725 HSPB8Q9UJY1 196 aa12.04□□□□□ -0.48
SSU72-203ENST00000378725 Q6ZRU5 148 aa12.03□□□□□ -0.48
SSU72-203ENST00000378725 PACRGQ96M98 296 aaPredicted RBP12.02□□□□□ -0.49
SSU72-203ENST00000378725 CHAC1Q9BUX1 264 aa12.02□□□□□ -0.49
SSU72-203ENST00000378725 KRTAP17-1Q9BYP8 105 aa12.02□□□□□ -0.49
SSU72-203ENST00000378725 CHTOPQ9Y3Y2 248 aaKnown RBP12.02□□□□□ -0.49
SSU72-203ENST00000378725 SMIM1B2RUZ4 78 aa12.01□□□□□ -0.49
SSU72-203ENST00000378725 FABP4P15090 132 aa12.01□□□□□ -0.49
SSU72-203ENST00000378725 RNF151Q2KHN1 245 aa12.01□□□□□ -0.49
SSU72-203ENST00000378725 Q8IZM0 81 aa12.01□□□□□ -0.49
SSU72-203ENST00000378725 MRPL35Q9NZE8 188 aaKnown RBP12.01□□□□□ -0.49
SSU72-203ENST00000378725 C11orf86A6NJI1 115 aa12□□□□□ -0.49
SSU72-203ENST00000378725 H3BRM9 83 aa12□□□□□ -0.49
SSU72-203ENST00000378725 NDUFA1O15239 70 aa12□□□□□ -0.49
SSU72-203ENST00000378725 ZNF22P17026 224 aaPredicted RBP12□□□□□ -0.49
SSU72-203ENST00000378725 KIAA1109Q2LD37 5005 aa12□□□□□ -0.49
SSU72-203ENST00000378725 F8VRH5 84 aa11.99□□□□□ -0.49
SSU72-203ENST00000378725 CIRBPQ14011 172 aaKnown RBP11.99□□□□□ -0.49
SSU72-203ENST00000378725 C10orf25Q5T742 122 aa11.99□□□□□ -0.49
SSU72-203ENST00000378725 UNQ6190/PRO20217Q6UXQ8 127 aa11.99□□□□□ -0.49
SSU72-203ENST00000378725 DNAH8Q96JB1 4490 aa11.98□□□□□ -0.49
SSU72-203ENST00000378725 APOBP04114 4563 aaKnown RBP11.98□□□□□ -0.49
SSU72-203ENST00000378725 PRSS2P07478 247 aa11.98□□□□□ -0.49
SSU72-203ENST00000378725 ODF1Q14990 250 aa11.98□□□□□ -0.49
SSU72-203ENST00000378725 C6orf226Q5I0X4 101 aa11.98□□□□□ -0.49
SSU72-203ENST00000378725 PKIGQ9Y2B9 76 aa11.98□□□□□ -0.49
SSU72-203ENST00000378725 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
SSU72-203ENST00000378725 PANO1I0J062 215 aa11.97□□□□□ -0.49
SSU72-203ENST00000378725 SPINK8P0C7L1 97 aa11.97□□□□□ -0.49
SSU72-203ENST00000378725 TOMM7Q9P0U1 55 aa11.97□□□□□ -0.49
SSU72-203ENST00000378725 IGLV5-39A0A0G2JS06 123 aa11.96□□□□□ -0.49
SSU72-203ENST00000378725 C2orf82Q6UX34 121 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms