RNA–Protein interactions for RNA: ENST00000378105.4

PCDHGA1-201, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA1, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-201ENST00000378105 GP9P14770 177 aa8.03□□□□□ -1.12
PCDHGA1-201ENST00000378105 C19orf54Q5BKX5 351 aa8.03□□□□□ -1.12
PCDHGA1-201ENST00000378105 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
PCDHGA1-201ENST00000378105 FAM167A-AS1Q96KT0 104 aa8.03□□□□□ -1.12
PCDHGA1-201ENST00000378105 APOC4P55056 127 aa8.03□□□□□ -1.12
PCDHGA1-201ENST00000378105 SPANXCQ9NY87 97 aa8.02□□□□□ -1.13
PCDHGA1-201ENST00000378105 DAD1P61803 113 aa8.02□□□□□ -1.13
PCDHGA1-201ENST00000378105 DCANP1Q8TF63 244 aa8.02□□□□□ -1.13
PCDHGA1-201ENST00000378105 SCGB3A1Q96QR1 104 aa8.02□□□□□ -1.13
PCDHGA1-201ENST00000378105 SERP1Q9Y6X1 66 aa8.02□□□□□ -1.13
PCDHGA1-201ENST00000378105 GHRHP01286 108 aa8.01□□□□□ -1.13
PCDHGA1-201ENST00000378105 SUMO2P61956 95 aaKnown RBP8.01□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
PCDHGA1-201ENST00000378105 GNRH2O43555 120 aa8.01□□□□□ -1.13
PCDHGA1-201ENST00000378105 ATP5G1P05496 136 aa8.01□□□□□ -1.13
PCDHGA1-201ENST00000378105 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 PRB2P02812 416 aaPredicted RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 MUSTN1Q8IVN3 82 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 A0A0J9YY99 117 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 IGF1P05019 195 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 C18orf65Q6ZTR6 163 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 IGHV1OR15-1A0A075B7D0 117 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1BA6NDE4 496 aaKnown RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1EA6NEQ0 496 aaKnown RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1DP0C7P1 496 aaKnown RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1A1P0DJD3 496 aaKnown RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1CP0DJD4 496 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 RBMY1FQ15415 496 aaKnown RBP8□□□□□ -1.13
PCDHGA1-201ENST00000378105 TOMM7Q9P0U1 55 aa8□□□□□ -1.13
PCDHGA1-201ENST00000378105 IGHV3-30P01768 117 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 IGHV3-30-5P0DP03 117 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 TENM1Q9UKZ4 2725 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 NDUFC2-KCTD14E9PQ53 114 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 PLNP26678 52 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 ZNF625Q96I27 306 aaPredicted RBP7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 FBN1P35555 2871 aaKnown RBP7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 TRBV7-6A0A0J9YX20 115 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 LINC01006Q8NI28 216 aa7.99□□□□□ -1.13
PCDHGA1-201ENST00000378105 A0A0B4J2C4 111 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 PPP1R17O96001 155 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 BAALC-AS2P0C853 105 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 GPHB5Q86YW7 130 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 F8VRH5 84 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 EGR2P11161 476 aaPredicted RBP7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 SETXQ7Z333 2677 aaKnown RBP7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 Q8N6K4 173 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 A0A096LPF7 62 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 NXPH4O95158 308 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 LYPD5Q6UWN5 251 aa7.98□□□□□ -1.13
PCDHGA1-201ENST00000378105 FAM240AA0A1B0GVK7 77 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 COX6CP09669 75 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 ADAMTSL4-AS1Q5T5F5 129 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 C5orf38Q86SI9 138 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 DEFB4AO15263 64 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 FAM229BQ4G0N7 80 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 RMI2Q96E14 147 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 XCL1P47992 114 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 ZNF702PQ9H963 129 aa7.97□□□□□ -1.13
PCDHGA1-201ENST00000378105 PKD1L1Q8TDX9 2849 aa7.96□□□□□ -1.13
PCDHGA1-201ENST00000378105 RPL36AP83881 106 aaKnown RBP7.96□□□□□ -1.13
PCDHGA1-201ENST00000378105 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.96□□□□□ -1.13
PCDHGA1-201ENST00000378105 RPL36ALQ969Q0 106 aaKnown RBP7.96□□□□□ -1.13
PCDHGA1-201ENST00000378105 IGHV3-38A0A0C4DH36 116 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 F8WEM9 126 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 CCKP06307 115 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 C4orf3Q8WVX3 66 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 K7EMT4 169 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 C9orf66Q5T8R8 295 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 C6orf223Q8N319 242 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 GFRA4Q9GZZ7 299 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 ESM1Q9NQ30 184 aa7.96□□□□□ -1.14
PCDHGA1-201ENST00000378105 TSPEAR-AS2P59090 65 aa7.95□□□□□ -1.14
PCDHGA1-201ENST00000378105 NOP10Q9NPE3 64 aaKnown RBP7.95□□□□□ -1.14
PCDHGA1-201ENST00000378105 TMEM263Q8WUH6 116 aaKnown RBP7.95□□□□□ -1.14
PCDHGA1-201ENST00000378105 A8MU10 97 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 PSPHP1O15172 72 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 PAPPA-AS1Q5QFB9 102 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 TIMM21Q9BVV7 248 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 ICOSQ9Y6W8 199 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 DEFB135Q30KP9 77 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 CR1P17927 2039 aa7.94□□□□□ -1.14
PCDHGA1-201ENST00000378105 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 TRAV12-1A0A0B4J245 112 aa7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 LGALS3P17931 250 aaKnown RBP7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 PSMB8P28062 276 aa7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 ZNF80P51504 273 aaPredicted RBP7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 LAGE3Q14657 143 aa7.93□□□□□ -1.14
PCDHGA1-201ENST00000378105 CRIP1P50238 77 aa7.92□□□□□ -1.14
PCDHGA1-201ENST00000378105 TIMM17AQ99595 171 aa7.92□□□□□ -1.14
PCDHGA1-201ENST00000378105 DAND5Q8N907 189 aa7.92□□□□□ -1.14
PCDHGA1-201ENST00000378105 Q9HAA7 133 aa7.92□□□□□ -1.14
PCDHGA1-201ENST00000378105 C11orf86A6NJI1 115 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 DNAL4O96015 105 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 ACYP1P07311 99 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 RNASE1P07998 156 aaKnown RBP7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 UBE2DNLQ8IWF7 75 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 ZFAND3Q9H8U3 227 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 P0DMU3 169 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 FAM231AP0DMU4 169 aa7.91□□□□□ -1.14
PCDHGA1-201ENST00000378105 FAM231CP0DMU5 169 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms