RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 CNFNQ9BYD5 112 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 PRR3P79522 188 aaKnown RBP5.79□□□□□ -1.48
CKAP2-203ENST00000378037 GTSF1LQ9H1H1 148 aa5.79□□□□□ -1.48
CKAP2-203ENST00000378037 RPL13AP40429 203 aaKnown RBP5.78□□□□□ -1.48
CKAP2-203ENST00000378037 CRYBA4P53673 196 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 SMAGPQ0VAQ4 97 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 SS18Q15532 418 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 KIF25-AS1Q9Y6Z4 181 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 TRBV27A0A0K0K1C4 114 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 COX6CP09669 75 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 PRO0255Q9UI72 69 aa5.78□□□□□ -1.48
CKAP2-203ENST00000378037 PSCAO43653 123 aa5.77□□□□□ -1.49
CKAP2-203ENST00000378037 NFE4Q86UQ8 179 aa5.77□□□□□ -1.49
CKAP2-203ENST00000378037 TRAV25A0A0B4J276 109 aa5.77□□□□□ -1.49
CKAP2-203ENST00000378037 MIR7-3HGQ8N6C7 128 aa5.77□□□□□ -1.49
CKAP2-203ENST00000378037 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.76□□□□□ -1.49
CKAP2-203ENST00000378037 TRAV4A0A0B4J268 109 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 K7ERU9 68 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 C11orf72Q8NBR9 251 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 A0A1W2PPM0 123 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 C9orf118A6NHY6 69 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 IGIPA6NJ69 53 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 E9PLD3 99 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 DNAL4O96015 105 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
CKAP2-203ENST00000378037 S100A7L2Q5SY68 101 aa5.76□□□□□ -1.49
CKAP2-203ENST00000378037 DEFB131BA0A096LNP1 70 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 NTM-AS1Q6ZSK4 140 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 C11orf45Q8TAV5 145 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 TEX48A0A1B0GUV7 120 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 ZNF561-AS1K7EIQ3 104 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 NCR3O14931 201 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 TRBV6-8A0A0A6YYG3 113 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 IGKV2-24A0A0C4DH68 120 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 UBE2D4Q9Y2X8 147 aa5.75□□□□□ -1.49
CKAP2-203ENST00000378037 IGLV4-69A0A075B6H9 119 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 TIMM17AQ99595 171 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 Q8N2B8 174 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 PRO1854Q9UHT4 67 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 A0A0J9YXY3 114 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 FHL3Q13643 280 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 ADAMTSL4-AS1Q5T5F5 129 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 CHCHD7Q9BUK0 85 aa5.74□□□□□ -1.49
CKAP2-203ENST00000378037 TINCRA0A1B0GVN0 87 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 SLPIP03973 132 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 HERVK_113P63121 156 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 KPRPQ5T749 579 aaPredicted RBP5.73□□□□□ -1.49
CKAP2-203ENST00000378037 C6orf223Q8N319 242 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 GAGE12HA6NDE8 117 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 J3QR89 54 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 GIG44P09565 113 aaPredicted RBP5.73□□□□□ -1.49
CKAP2-203ENST00000378037 REG3AQ06141 175 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 MRPL23Q16540 153 aaKnown RBP5.73□□□□□ -1.49
CKAP2-203ENST00000378037 C10orf126Q8N4M7 172 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 MED14OSP0DP75 135 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 FHL2Q14192 279 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 LINC00242Q5T6M2 205 aa5.73□□□□□ -1.49
CKAP2-203ENST00000378037 A8MTW9 85 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 INSL3P51460 131 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 WFDC10BQ8IUB3 73 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 FAM19A4Q96LR4 140 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 SPANXA1Q9NS26 97 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 ICOSQ9Y6W8 199 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 CSMD3Q7Z407 3707 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 EIF4EBP3O60516 100 aaPredicted RBP5.72□□□□□ -1.49
CKAP2-203ENST00000378037 CHCHD10Q8WYQ3 142 aaPredicted RBP5.72□□□□□ -1.49
CKAP2-203ENST00000378037 IGHV1-58A0A0C4DH39 117 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 FUSP35637 526 aaKnown RBP eCLIP5.72□□□□□ -1.49
CKAP2-203ENST00000378037 HERV-K104P63124 156 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 LINC01620Q4KN68 170 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 DEFB105AQ8NG35 78 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 ODF3Q96PU9 254 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 SND1-IT1Q9HBX3 110 aa5.72□□□□□ -1.49
CKAP2-203ENST00000378037 LEPROTO15243 131 aa5.71□□□□□ -1.5
CKAP2-203ENST00000378037 RPL18AQ02543 176 aaKnown RBP5.71□□□□□ -1.5
CKAP2-203ENST00000378037 COX8CQ7Z4L0 72 aa5.71□□□□□ -1.5
CKAP2-203ENST00000378037 NTN5Q8WTR8 489 aaPredicted RBP5.71□□□□□ -1.5
CKAP2-203ENST00000378037 TRAV12-1A0A0B4J245 112 aa5.71□□□□□ -1.5
CKAP2-203ENST00000378037 COX7B2Q8TF08 81 aa5.71□□□□□ -1.5
CKAP2-203ENST00000378037 TMEM223A0PJW6 202 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 COX7A2LO14548 114 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 UBE2D3P61077 147 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 UBE2D2P62837 147 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 SPAG11BQ08648 103 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 RNF152Q8N8N0 203 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 C1orf43Q9BWL3 253 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 TSPAN13O95857 204 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 CFC1BP0CG36 223 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 CFC1P0CG37 223 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 GAGE2BQ13066 116 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 CAMK2N2Q96S95 79 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 ZMAT4Q9H898 229 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 K7EP34 96 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 LYRM7Q5U5X0 104 aa5.7□□□□□ -1.5
CKAP2-203ENST00000378037 AKAP9Q99996 3911 aa5.69□□□□□ -1.5
CKAP2-203ENST00000378037 KRTAP10-11P60412 298 aa5.69□□□□□ -1.5
CKAP2-203ENST00000378037 CDC42SE2Q9NRR3 84 aa5.69□□□□□ -1.5
CKAP2-203ENST00000378037 MRPL52Q86TS9 123 aaKnown RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms