RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 SCXQ7RTU7 201 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 A0A087WVE0 104 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 A0A1W2PPR1 153 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 KIR2DL5BQ8NHK3 375 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 LINC00846Q9NV44 126 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 SNURFQ9Y675 71 aa6.25□□□□□ -1.41
PCDH9-202ENST00000377865 DEFB4AO15263 64 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 LINC00337Q8N6G1 96 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 LOC107984640A0A0U1RRK4 108 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 ZNF73O43830 326 aaPredicted RBP6.24□□□□□ -1.41
PCDH9-202ENST00000377865 V9GYY9 64 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 FHL2Q14192 279 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 DHRS4-AS1Q9P1J3 65 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 IGLV4-60A0A075B6I1 120 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 A0A1B0GUV1 79 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 NDUFB1O75438 58 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 FAM19A3Q7Z5A8 133 aa6.24□□□□□ -1.41
PCDH9-202ENST00000377865 FHL3Q13643 280 aa6.23□□□□□ -1.41
PCDH9-202ENST00000377865 PRB1P04280 392 aa6.23□□□□□ -1.41
PCDH9-202ENST00000377865 SPTBN1Q01082 2364 aaKnown RBP6.22□□□□□ -1.41
PCDH9-202ENST00000377865 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
PCDH9-202ENST00000377865 CXCL6P80162 114 aa6.22□□□□□ -1.41
PCDH9-202ENST00000377865 AGRNO00468 2067 aa6.21□□□□□ -1.41
PCDH9-202ENST00000377865 HRCT1Q6UXD1 115 aa6.21□□□□□ -1.41
PCDH9-202ENST00000377865 J3QKU1 62 aa6.21□□□□□ -1.42
PCDH9-202ENST00000377865 LINC00575Q6W349 94 aa6.21□□□□□ -1.42
PCDH9-202ENST00000377865 XAGE1AQ9HD64 81 aa6.21□□□□□ -1.42
PCDH9-202ENST00000377865 Q8N2B8 174 aa6.21□□□□□ -1.42
PCDH9-202ENST00000377865 ARHGAP32A7KAX9 2087 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 SOSTDC1Q6X4U4 206 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 CYSRT1A8MQ03 144 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 IGLV1-51P01701 117 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 FAM218AQ96MZ4 157 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 WFDC10AQ9H1F0 79 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 F8WDY8 70 aa6.2□□□□□ -1.42
PCDH9-202ENST00000377865 WFDC11Q8NEX6 87 aa6.19□□□□□ -1.42
PCDH9-202ENST00000377865 LINC01006Q8NI28 216 aa6.19□□□□□ -1.42
PCDH9-202ENST00000377865 SYCNQ0VAF6 134 aa6.19□□□□□ -1.42
PCDH9-202ENST00000377865 ABCA4P78363 2273 aa6.19□□□□□ -1.42
PCDH9-202ENST00000377865 ANKHD1Q8IWZ3 2542 aaKnown RBP6.19□□□□□ -1.42
PCDH9-202ENST00000377865 LINC01600Q96MT4 127 aa6.19□□□□□ -1.42
PCDH9-202ENST00000377865 NDUFS5O43920 106 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 EGFEM1PQ0D2K5 195 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 COL6A6A6NMZ7 2263 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 UBE2AP49459 152 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 Q6ZVQ6 151 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 C16orf95Q9H693 158 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 CACNA1BQ00975 2339 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 PRYO14603 147 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 LINC01547P58512 204 aaPredicted RBP6.18□□□□□ -1.42
PCDH9-202ENST00000377865 ZNF843Q8N446 348 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 IGHV3OR16-9A0A0B4J2B5 98 aa6.18□□□□□ -1.42
PCDH9-202ENST00000377865 C3orf84H3BNL1 204 aa6.17□□□□□ -1.42
PCDH9-202ENST00000377865 NHLRC4P0CG21 123 aaPredicted RBP6.17□□□□□ -1.42
PCDH9-202ENST00000377865 FAM19A1Q7Z5A9 133 aa6.17□□□□□ -1.42
PCDH9-202ENST00000377865 UNQ6190/PRO20217Q6UXQ8 127 aa6.17□□□□□ -1.42
PCDH9-202ENST00000377865 AKAP6Q13023 2319 aa6.17□□□□□ -1.42
PCDH9-202ENST00000377865 PRRC2AP48634 2157 aaKnown RBP6.16□□□□□ -1.42
PCDH9-202ENST00000377865 Q8N3U1 123 aa6.16□□□□□ -1.42
PCDH9-202ENST00000377865 SMCR5Q8TEV8 140 aa6.16□□□□□ -1.42
PCDH9-202ENST00000377865 B9D2Q9BPU9 175 aa6.16□□□□□ -1.42
PCDH9-202ENST00000377865 PRR3P79522 188 aaKnown RBP6.16□□□□□ -1.42
PCDH9-202ENST00000377865 HILS1P60008 231 aa6.16□□□□□ -1.42
PCDH9-202ENST00000377865 C14orf177Q52M58 125 aa6.16□□□□□ -1.42
PCDH9-202ENST00000377865 MRPL55Q7Z7F7 128 aaKnown RBP6.16□□□□□ -1.42
PCDH9-202ENST00000377865 LOC110117498A0A087WWA1 95 aa6.15□□□□□ -1.42
PCDH9-202ENST00000377865 C9orf116Q5BN46 136 aaPredicted RBP6.15□□□□□ -1.42
PCDH9-202ENST00000377865 CACNA1HO95180 2353 aa6.15□□□□□ -1.42
PCDH9-202ENST00000377865 A8MTW9 85 aa6.15□□□□□ -1.43
PCDH9-202ENST00000377865 C1orf195Q5TG92 126 aa6.15□□□□□ -1.43
PCDH9-202ENST00000377865 LINC00482Q8N8I6 264 aa6.15□□□□□ -1.43
PCDH9-202ENST00000377865 C11orf45Q8TAV5 145 aa6.14□□□□□ -1.43
PCDH9-202ENST00000377865 APC2O95996 2303 aa6.14□□□□□ -1.43
PCDH9-202ENST00000377865 GVINP1Q7Z2Y8 2422 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 FAM30AQ9NZY2 134 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 TRBV7-6A0A0J9YX20 115 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 A0A0U1RQV1 116 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 GOLGB1Q14789 3259 aaKnown RBP6.13□□□□□ -1.43
PCDH9-202ENST00000377865 IGKV2-28A0A075B6P5 120 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 H0Y9J4 135 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 IGKV2D-28P01615 120 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 ZNF575Q86XF7 245 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 TMEM254Q8TBM7 123 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 C2orf48Q96LS8 159 aa6.13□□□□□ -1.43
PCDH9-202ENST00000377865 LY6G6DO95868 133 aa6.12□□□□□ -1.43
PCDH9-202ENST00000377865 KPRPQ5T749 579 aaPredicted RBP6.12□□□□□ -1.43
PCDH9-202ENST00000377865 DEFB131BA0A096LNP1 70 aa6.12□□□□□ -1.43
PCDH9-202ENST00000377865 PRB2P02812 416 aaPredicted RBP6.12□□□□□ -1.43
PCDH9-202ENST00000377865 Q6ZQT0 140 aa6.12□□□□□ -1.43
PCDH9-202ENST00000377865 PRO0628Q9UI54 55 aa6.12□□□□□ -1.43
PCDH9-202ENST00000377865 CHKB-CPT1BH3BT56 60 aa6.12□□□□□ -1.43
PCDH9-202ENST00000377865 C6orf223Q8N319 242 aa6.11□□□□□ -1.43
PCDH9-202ENST00000377865 EIF4EBP3O60516 100 aaPredicted RBP6.1□□□□□ -1.43
PCDH9-202ENST00000377865 Q9UF83 564 aa6.1□□□□□ -1.43
PCDH9-202ENST00000377865 A0A1B0GW54 56 aa6.1□□□□□ -1.43
PCDH9-202ENST00000377865 C1orf137Q5JT78 98 aa6.1□□□□□ -1.43
PCDH9-202ENST00000377865 WFDC10BQ8IUB3 73 aa6.09□□□□□ -1.43
PCDH9-202ENST00000377865 SPATA3Q8NHX4 192 aa6.09□□□□□ -1.43
PCDH9-202ENST00000377865 HIGD2AQ9BW72 106 aa6.09□□□□□ -1.43
PCDH9-202ENST00000377865 DNAH12Q6ZR08 3092 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms