RNA–Protein interactions for RNA: ENST00000377819.9

RTN3-206, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,937 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-206ENST00000377819 NUPR1O60356 82 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 C1orf137Q5JT78 98 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 LINC00482Q8N8I6 264 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 TRAV7A0A075B6U4 112 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 TRBV7-7A0A0K0K1E9 115 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 SETD2Q9BYW2 2564 aaPredicted RBP7.93□□□□□ -1.14
RTN3-206ENST00000377819 IGF2-ASQ6U949 168 aa7.93□□□□□ -1.14
RTN3-206ENST00000377819 BBC3Q96PG8 261 aaPredicted RBP7.93□□□□□ -1.14
RTN3-206ENST00000377819 C11orf53Q8IXP5 236 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 LINC00526Q96FQ7 95 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 PROK2Q9HC23 129 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 SPTBN4Q9H254 2564 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 INAFM1C9JVW0 142 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 BEAN1Q3B7T3 259 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 LRRC75A-AS1Q8N1F1 130 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 ACYP2P14621 99 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 NEXN-AS1Q8NBZ9 246 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 C22orf34Q6ZV56 151 aa7.92□□□□□ -1.14
RTN3-206ENST00000377819 ANKRD36A6QL64 1941 aa7.91□□□□□ -1.14
RTN3-206ENST00000377819 RSPO1Q2MKA7 263 aaPredicted RBP7.91□□□□□ -1.14
RTN3-206ENST00000377819 CHD9Q3L8U1 2897 aa7.91□□□□□ -1.14
RTN3-206ENST00000377819 M0QXV9 152 aa7.91□□□□□ -1.14
RTN3-206ENST00000377819 PLA2G2CQ5R387 149 aa7.91□□□□□ -1.14
RTN3-206ENST00000377819 ODF3BA8MYP8 253 aa7.9□□□□□ -1.14
RTN3-206ENST00000377819 MRPS12O15235 138 aaKnown RBP7.9□□□□□ -1.14
RTN3-206ENST00000377819 RNASE3P12724 160 aaKnown RBP7.9□□□□□ -1.14
RTN3-206ENST00000377819 LIMD2Q9BT23 127 aa7.9□□□□□ -1.14
RTN3-206ENST00000377819 COX17Q14061 63 aa7.9□□□□□ -1.15
RTN3-206ENST00000377819 RITA1Q96K30 269 aa7.9□□□□□ -1.15
RTN3-206ENST00000377819 FLG2Q5D862 2391 aaPredicted RBP7.9□□□□□ -1.15
RTN3-206ENST00000377819 Q8N7P7 452 aa7.89□□□□□ -1.15
RTN3-206ENST00000377819 RETNLBQ9BQ08 111 aa7.89□□□□□ -1.15
RTN3-206ENST00000377819 NUP210Q8TEM1 1887 aaPredicted RBP7.89□□□□□ -1.15
RTN3-206ENST00000377819 PIP4P1Q86T03 277 aa7.89□□□□□ -1.15
RTN3-206ENST00000377819 SPTBN5Q9NRC6 3674 aaKnown RBP7.89□□□□□ -1.15
RTN3-206ENST00000377819 TP53TG3Q9ULZ0 132 aa7.89□□□□□ -1.15
RTN3-206ENST00000377819 NOTCH4Q99466 2003 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 EGFEM1PQ0D2K5 195 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 ZNF702PQ9H963 129 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 PSPHP1O15172 72 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 IGLV5-52A0A0A0MRZ9 124 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 IGLV2-14P01704 120 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 MRGPRG-AS1Q2M3A8 158 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 C2orf48Q96LS8 159 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 ADORA2A-AS1P86434 159 aa7.88□□□□□ -1.15
RTN3-206ENST00000377819 LINC00959A0A1B0GUT2 108 aa7.87□□□□□ -1.15
RTN3-206ENST00000377819 PLXNB3Q9ULL4 1909 aa7.87□□□□□ -1.15
RTN3-206ENST00000377819 SPAG11AQ6PDA7 123 aa7.87□□□□□ -1.15
RTN3-206ENST00000377819 IGKV2D-30A0A075B6S6 120 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 IGKV2-30P06310 120 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 SMIM11BQ8TCY0 68 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 CYSRT1A8MQ03 144 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 M0QY20 66 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 PRLHP81277 87 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 CHCHD7Q9BUK0 85 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 Q6YL49 198 aa7.86□□□□□ -1.15
RTN3-206ENST00000377819 H0Y9P7 68 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 A0A087WSZ3 146 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 IGLV2-8P01709 118 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 IGLV3-1P01715 115 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 IGFL2Q6UWQ7 119 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 LINC01556Q5JQF7 62 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 Q8IZM0 81 aa7.85□□□□□ -1.15
RTN3-206ENST00000377819 ZNF80P51504 273 aaPredicted RBP7.84□□□□□ -1.15
RTN3-206ENST00000377819 FBXL19-AS1Q494R0 122 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 Q6ZSV7 163 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 A0A1B0GU69 56 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 SPINT4Q6UDR6 99 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 TP73-AS1Q9UF72 201 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 REG3GQ6UW15 175 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 CLUHP3Q96NS8 147 aa7.84□□□□□ -1.15
RTN3-206ENST00000377819 C6orf223Q8N319 242 aa7.83□□□□□ -1.16
RTN3-206ENST00000377819 POLQO75417 2590 aa7.83□□□□□ -1.16
RTN3-206ENST00000377819 CRYGAP11844 174 aa7.83□□□□□ -1.16
RTN3-206ENST00000377819 LMO4P61968 165 aa7.83□□□□□ -1.16
RTN3-206ENST00000377819 Q8N3U1 123 aa7.82□□□□□ -1.16
RTN3-206ENST00000377819 Q9BRP9 147 aa7.82□□□□□ -1.16
RTN3-206ENST00000377819 TNRC18O15417 2968 aaPredicted RBP7.82□□□□□ -1.16
RTN3-206ENST00000377819 TMEM254Q8TBM7 123 aa7.82□□□□□ -1.16
RTN3-206ENST00000377819 MKI67P46013 3256 aaKnown RBP7.81□□□□□ -1.16
RTN3-206ENST00000377819 SPRNQ5BIV9 151 aa7.81□□□□□ -1.16
RTN3-206ENST00000377819 P0C879 139 aa7.81□□□□□ -1.16
RTN3-206ENST00000377819 TNRC6BQ9UPQ9 1833 aaKnown RBP7.81□□□□□ -1.16
RTN3-206ENST00000377819 LINC00575Q6W349 94 aa7.81□□□□□ -1.16
RTN3-206ENST00000377819 MSMPQ1L6U9 139 aa7.81□□□□□ -1.16
RTN3-206ENST00000377819 CHD7Q9P2D1 2997 aa7.81□□□□□ -1.16
RTN3-206ENST00000377819 HCG22E2RYF7 251 aa7.8□□□□□ -1.16
RTN3-206ENST00000377819 IGLV2-11P01706 119 aa7.8□□□□□ -1.16
RTN3-206ENST00000377819 C1orf134Q5TEV5 83 aa7.8□□□□□ -1.16
RTN3-206ENST00000377819 YPEL4Q96NS1 127 aa7.8□□□□□ -1.16
RTN3-206ENST00000377819 PLA2G2EQ9NZK7 142 aa7.8□□□□□ -1.16
RTN3-206ENST00000377819 SBSPONQ8IVN8 264 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 U3KQA8 63 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 PLXNA2O75051 1894 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 Q8N2B8 174 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 MBD6Q96DN6 1003 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 E7EUB6 86 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 C7orf65Q6ZTY9 151 aa7.79□□□□□ -1.16
RTN3-206ENST00000377819 TRBV10-3A0A0K0K1G6 114 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms