RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 TIRAPP58753 221 aa10.47□□□□□ -0.73
TCOF1-202ENST00000377797 ANKRD29Q8N6D5 301 aa10.47□□□□□ -0.73
TCOF1-202ENST00000377797 WFDC2Q14508 124 aa10.47□□□□□ -0.73
TCOF1-202ENST00000377797 NDUFA1O15239 70 aa10.47□□□□□ -0.73
TCOF1-202ENST00000377797 FHL3Q13643 280 aa10.47□□□□□ -0.73
TCOF1-202ENST00000377797 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.73
TCOF1-202ENST00000377797 CXCL5P42830 114 aa10.46□□□□□ -0.73
TCOF1-202ENST00000377797 UBL5Q9BZL1 73 aa10.46□□□□□ -0.73
TCOF1-202ENST00000377797 A8MZ25 164 aa10.46□□□□□ -0.73
TCOF1-202ENST00000377797 CHCHD10Q8WYQ3 142 aaPredicted RBP10.46□□□□□ -0.73
TCOF1-202ENST00000377797 RBMY1FQ15415 496 aaKnown RBP10.46□□□□□ -0.74
TCOF1-202ENST00000377797 FAM19A4Q96LR4 140 aa10.46□□□□□ -0.74
TCOF1-202ENST00000377797 TM2D2Q9BX73 214 aa10.46□□□□□ -0.74
TCOF1-202ENST00000377797 MIAQ16674 131 aa10.45□□□□□ -0.74
TCOF1-202ENST00000377797 C2orf91Q6ZV80 131 aa10.45□□□□□ -0.74
TCOF1-202ENST00000377797 BEAN1Q3B7T3 259 aa10.45□□□□□ -0.74
TCOF1-202ENST00000377797 KIF25-AS1Q9Y6Z4 181 aa10.45□□□□□ -0.74
TCOF1-202ENST00000377797 HAMPP81172 84 aa10.44□□□□□ -0.74
TCOF1-202ENST00000377797 TRACP01848 142 aa10.44□□□□□ -0.74
TCOF1-202ENST00000377797 Q6ZSN1 163 aa10.44□□□□□ -0.74
TCOF1-202ENST00000377797 MUC4Q99102 2169 aa10.43□□□□□ -0.74
TCOF1-202ENST00000377797 MRPS36P82909 103 aaKnown RBP10.43□□□□□ -0.74
TCOF1-202ENST00000377797 RPL18AQ02543 176 aaKnown RBP10.42□□□□□ -0.74
TCOF1-202ENST00000377797 KPRPQ5T749 579 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-202ENST00000377797 TEN1Q86WV5 123 aa10.42□□□□□ -0.74
TCOF1-202ENST00000377797 HIGD2BQ4VC39 106 aa10.41□□□□□ -0.74
TCOF1-202ENST00000377797 CDC42SE2Q9NRR3 84 aa10.41□□□□□ -0.74
TCOF1-202ENST00000377797 UBE2D1P51668 147 aa10.41□□□□□ -0.74
TCOF1-202ENST00000377797 TMEM126AQ9H061 195 aa10.41□□□□□ -0.74
TCOF1-202ENST00000377797 FLNCQ14315 2725 aa10.41□□□□□ -0.74
TCOF1-202ENST00000377797 RETNQ9HD89 108 aa10.4□□□□□ -0.74
TCOF1-202ENST00000377797 F8WEM9 126 aa10.4□□□□□ -0.74
TCOF1-202ENST00000377797 ATMQ13315 3056 aa10.4□□□□□ -0.74
TCOF1-202ENST00000377797 C11orf72Q8NBR9 251 aa10.4□□□□□ -0.74
TCOF1-202ENST00000377797 MGAM2Q2M2H8 2515 aa10.4□□□□□ -0.75
TCOF1-202ENST00000377797 BAALC-AS2P0C853 105 aa10.4□□□□□ -0.75
TCOF1-202ENST00000377797 LINC01620Q4KN68 170 aa10.4□□□□□ -0.75
TCOF1-202ENST00000377797 CHCHD7Q9BUK0 85 aa10.4□□□□□ -0.75
TCOF1-202ENST00000377797 FHL2Q14192 279 aa10.39□□□□□ -0.75
TCOF1-202ENST00000377797 LINC00315P59091 139 aa10.39□□□□□ -0.75
TCOF1-202ENST00000377797 SPANXB1Q9NS25 103 aaPredicted RBP10.39□□□□□ -0.75
TCOF1-202ENST00000377797 ADGRG4Q8IZF6 3080 aa10.39□□□□□ -0.75
TCOF1-202ENST00000377797 H0YGX0 51 aa10.39□□□□□ -0.75
TCOF1-202ENST00000377797 NBEAQ8NFP9 2946 aa10.39□□□□□ -0.75
TCOF1-202ENST00000377797 FOXI1Q12951 378 aa10.38□□□□□ -0.75
TCOF1-202ENST00000377797 KLK5Q9Y337 293 aaPredicted RBP10.38□□□□□ -0.75
TCOF1-202ENST00000377797 LINC00959A0A1B0GUT2 108 aa10.38□□□□□ -0.75
TCOF1-202ENST00000377797 LINC00694P0DN24 101 aa10.38□□□□□ -0.75
TCOF1-202ENST00000377797 LELP1Q5T871 98 aa10.38□□□□□ -0.75
TCOF1-202ENST00000377797 DMXL1Q9Y485 3027 aa10.38□□□□□ -0.75
TCOF1-202ENST00000377797 TRAV10A0A0B4J240 114 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 LINC00242Q5T6M2 205 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 A0A0J9YWU9 116 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 PTH2Q96A98 100 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 SPANXCQ9NY87 97 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 CHD6Q8TD26 2715 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 NCR3O14931 201 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 CLEC2BQ92478 149 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 IGLV4-69A0A075B6H9 119 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 A0A0B4J2C4 111 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 LINC00308Q8TCZ7 52 aa10.37□□□□□ -0.75
TCOF1-202ENST00000377797 ACYP1P07311 99 aa10.36□□□□□ -0.75
TCOF1-202ENST00000377797 NANOS2P60321 138 aaKnown RBP10.36□□□□□ -0.75
TCOF1-202ENST00000377797 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 IBA57-AS1B1ANH7 110 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 CD164L2Q6UWJ8 174 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 KRTAP1-3Q8IUG1 177 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 RNF183Q96D59 192 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 MAST4O15021 2626 aa10.35□□□□□ -0.75
TCOF1-202ENST00000377797 UBE2BP63146 152 aa10.34□□□□□ -0.75
TCOF1-202ENST00000377797 ORMDL1Q9P0S3 153 aa10.34□□□□□ -0.75
TCOF1-202ENST00000377797 UFSP1Q6NVU6 142 aa10.34□□□□□ -0.75
TCOF1-202ENST00000377797 IGLV4-60A0A075B6I1 120 aa10.33□□□□□ -0.76
TCOF1-202ENST00000377797 LECT2O14960 151 aa10.33□□□□□ -0.76
TCOF1-202ENST00000377797 LINC00526Q96FQ7 95 aa10.33□□□□□ -0.76
TCOF1-202ENST00000377797 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
TCOF1-202ENST00000377797 AMELXQ99217 191 aa10.33□□□□□ -0.76
TCOF1-202ENST00000377797 TCL1BO95988 128 aa10.32□□□□□ -0.76
TCOF1-202ENST00000377797 POM121L12Q8N7R1 296 aa10.32□□□□□ -0.76
TCOF1-202ENST00000377797 Q6ZTC4 211 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 UNC79Q9P2D8 2635 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 FAM236AA0A1B0GUQ0 79 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 FAM236BA0A1B0GV22 79 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 ETDCA0A1B0GVM5 59 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
TCOF1-202ENST00000377797 CSDC2Q9Y534 153 aaKnown RBP10.31□□□□□ -0.76
TCOF1-202ENST00000377797 COL12A1Q99715 3063 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 TIMM17BO60830 172 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 TSPEAR-AS2P59090 65 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 Q9UF83 564 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 IL17DQ8TAD2 202 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 XAGE1AQ9HD64 81 aa10.3□□□□□ -0.76
TCOF1-202ENST00000377797 RBM3P98179 157 aaKnown RBP10.3□□□□□ -0.76
TCOF1-202ENST00000377797 TRBV10-2A0A0K0K1G8 114 aa10.29□□□□□ -0.76
TCOF1-202ENST00000377797 COX6A2Q02221 97 aa10.29□□□□□ -0.76
TCOF1-202ENST00000377797 KRTAP24-1Q3LI83 254 aa10.29□□□□□ -0.76
TCOF1-202ENST00000377797 SMIM1B2RUZ4 78 aa10.29□□□□□ -0.76
TCOF1-202ENST00000377797 DEFB105AQ8NG35 78 aa10.29□□□□□ -0.76
TCOF1-202ENST00000377797 IGKV3D-7A0A0C4DH55 119 aa10.28□□□□□ -0.76
TCOF1-202ENST00000377797 LINC01546A6NGU7 62 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms