RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 BEAN1Q3B7T3 259 aa8.26□□□□□ -1.09
TM9SF2-201ENST00000376387 LINC00526Q96FQ7 95 aa8.26□□□□□ -1.09
TM9SF2-201ENST00000376387 CHD8Q9HCK8 2581 aa8.26□□□□□ -1.09
TM9SF2-201ENST00000376387 LINC00242Q5T6M2 205 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 DEFB136Q30KP8 78 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 C18orf65Q6ZTR6 163 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 IGLV5-45A0A087WSX0 123 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 NDUFC2O95298 119 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 PIK3CD-AS1Q5SR53 167 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 Q9HAA7 133 aa8.25□□□□□ -1.09
TM9SF2-201ENST00000376387 HOXD3P31249 432 aaPredicted RBP8.24□□□□□ -1.09
TM9SF2-201ENST00000376387 BAALC-AS2P0C853 105 aa8.24□□□□□ -1.09
TM9SF2-201ENST00000376387 IGLV5-39A0A0G2JS06 123 aa8.23□□□□□ -1.09
TM9SF2-201ENST00000376387 DEFB112Q30KQ8 113 aa8.23□□□□□ -1.09
TM9SF2-201ENST00000376387 SMIM1B2RUZ4 78 aa8.23□□□□□ -1.09
TM9SF2-201ENST00000376387 MSMBP08118 114 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 SLURP1P55000 103 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 SERTAD4-AS1Q5TG53 156 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 C11orf72Q8NBR9 251 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 IGHV3-53P01767 116 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 C9orf129Q5T035 196 aaKnown RBP8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 PRIMA1Q86XR5 153 aa8.22□□□□□ -1.09
TM9SF2-201ENST00000376387 C2CD3Q4AC94 2353 aa8.21□□□□□ -1.09
TM9SF2-201ENST00000376387 ACYP1P07311 99 aa8.21□□□□□ -1.09
TM9SF2-201ENST00000376387 LINC00643Q86TS7 51 aa8.21□□□□□ -1.09
TM9SF2-201ENST00000376387 VPREB1P12018 145 aa8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 RBM3P98179 157 aaKnown RBP8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 IMUPQ9GZP8 106 aa8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 FLNCQ14315 2725 aa8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 CCL19Q99731 98 aa8.2□□□□□ -1.1
TM9SF2-201ENST00000376387 NIPBLQ6KC79 2804 aaeCLIP8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 NTM-AS1Q6ZSK4 140 aa8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 C11orf68Q9H3H3 251 aaKnown RBP8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 FBN2P35556 2912 aa8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 TMEM258P61165 79 aa8.19□□□□□ -1.1
TM9SF2-201ENST00000376387 MAPK1IP1LQ8NDC0 245 aa8.18□□□□□ -1.1
TM9SF2-201ENST00000376387 CHD6Q8TD26 2715 aa8.18□□□□□ -1.1
TM9SF2-201ENST00000376387 USP9YO00507 2555 aaPredicted RBP8.18□□□□□ -1.1
TM9SF2-201ENST00000376387 GNLYP22749 145 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 C5orf38Q86SI9 138 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 COX7CP15954 63 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 NOTCH3Q9UM47 2321 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 PKD1L2Q7Z442 2459 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 A0A087WYN8 130 aa8.17□□□□□ -1.1
TM9SF2-201ENST00000376387 A8MTW9 85 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 XCL2Q9UBD3 114 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 MAP6D1Q9H9H5 199 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 POLQO75417 2590 aa8.16□□□□□ -1.1
TM9SF2-201ENST00000376387 CFAP46Q8IYW2 2715 aa8.15□□□□□ -1.1
TM9SF2-201ENST00000376387 CENPEQ02224 2701 aa8.15□□□□□ -1.1
TM9SF2-201ENST00000376387 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
TM9SF2-201ENST00000376387 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
TM9SF2-201ENST00000376387 C14orf132Q9NPU4 83 aa8.15□□□□□ -1.1
TM9SF2-201ENST00000376387 ATP5G1P05496 136 aa8.15□□□□□ -1.11
TM9SF2-201ENST00000376387 CDC42SE2Q9NRR3 84 aa8.15□□□□□ -1.11
TM9SF2-201ENST00000376387 IGKV3D-7A0A0C4DH55 119 aa8.14□□□□□ -1.11
TM9SF2-201ENST00000376387 MIR7-3HGQ8N6C7 128 aa8.14□□□□□ -1.11
TM9SF2-201ENST00000376387 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
TM9SF2-201ENST00000376387 HILS1P60008 231 aa8.14□□□□□ -1.11
TM9SF2-201ENST00000376387 ZNF702PQ9H963 129 aa8.14□□□□□ -1.11
TM9SF2-201ENST00000376387 IGKV3OR2-268A0A0C4DH90 116 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 B4DSR2 109 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 Q6ZTI0 123 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 FAM19A3Q7Z5A8 133 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 SMIM11BQ8TCY0 68 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 A0A087WVE0 104 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 RPL28P46779 137 aaKnown RBP8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 FAM222AQ5U5X8 452 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 TOMM7Q9P0U1 55 aa8.13□□□□□ -1.11
TM9SF2-201ENST00000376387 MYO9AB2RTY4 2548 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 WNK1Q9H4A3 2382 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 INSP01308 110 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 CXCL5P42830 114 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 MDFIQ99750 246 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 CRYGAP11844 174 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 CRPP02741 224 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 SLPIP03973 132 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 HIST1H4AP62805 103 aaKnown RBP8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 C1orf158Q8N1D5 194 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
TM9SF2-201ENST00000376387 ZNF469Q96JG9 3925 aaPredicted RBP8.11□□□□□ -1.11
TM9SF2-201ENST00000376387 LOC100131303A0A0U1RQF7 123 aa8.11□□□□□ -1.11
TM9SF2-201ENST00000376387 COPS9Q8WXC6 57 aa8.11□□□□□ -1.11
TM9SF2-201ENST00000376387 TEX15Q9BXT5 2789 aa8.11□□□□□ -1.11
TM9SF2-201ENST00000376387 USP9XQ93008 2570 aaPredicted RBP8.11□□□□□ -1.11
TM9SF2-201ENST00000376387 PLAC8L1A1L4L8 177 aa8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 NCR3O14931 201 aa8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 K7EQD1 137 aa8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 SETXQ7Z333 2677 aaKnown RBP8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 RPL36AP83881 106 aaKnown RBP8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 RPL36ALQ969Q0 106 aaKnown RBP8.1□□□□□ -1.11
TM9SF2-201ENST00000376387 NF1P21359 2839 aa8.09□□□□□ -1.11
TM9SF2-201ENST00000376387 COX7B2Q8TF08 81 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms