RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 BAALCQ8WXS3 180 aa7.9□□□□□ -1.14
LSM2-208ENST00000375661 CHCHD10Q8WYQ3 142 aaPredicted RBP7.89□□□□□ -1.15
LSM2-208ENST00000375661 GAGE12HA6NDE8 117 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 NPSP0C0P6 89 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 LINC00310P59036 64 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 PMCHL1Q16048 86 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 LINC01620Q4KN68 170 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 ZC2HC1BQ5TFG8 222 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 CHCHD1Q96BP2 118 aaKnown RBP7.88□□□□□ -1.15
LSM2-208ENST00000375661 TIMM17AQ99595 171 aa7.88□□□□□ -1.15
LSM2-208ENST00000375661 LRP1Q07954 4544 aaKnown RBP7.88□□□□□ -1.15
LSM2-208ENST00000375661 TRAV13-1A0A0B4J241 112 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 CCL25O15444 150 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 FOXI1Q12951 378 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 SS18Q15532 418 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 LINC00173Q6ZV60 143 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 ERASQ7Z444 233 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 BAGE3Q86Y29 109 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 TMEM141Q96I45 108 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 SCGB3A1Q96QR1 104 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 AMELXQ99217 191 aa7.87□□□□□ -1.15
LSM2-208ENST00000375661 LINC01549A6NIU2 74 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HBDP02042 147 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 XCL1P47992 114 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 C14orf177Q52M58 125 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 PDZD11Q5EBL8 140 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
LSM2-208ENST00000375661 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 C1orf196B1AJZ1 125 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 USP17L23D6RBM5 183 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 NUPR1O60356 82 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 RPL37AP61513 92 aaKnown RBP7.85□□□□□ -1.15
LSM2-208ENST00000375661 CD164L2Q6UWJ8 174 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 TEX43Q6ZNM6 134 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 VCX2Q9H322 139 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 FAT3Q8TDW7 4589 aa7.85□□□□□ -1.15
LSM2-208ENST00000375661 SERF1AO75920 110 aa7.84□□□□□ -1.15
LSM2-208ENST00000375661 UBE2D1P51668 147 aa7.84□□□□□ -1.15
LSM2-208ENST00000375661 Q6ZN92 141 aa7.84□□□□□ -1.15
LSM2-208ENST00000375661 UBR4Q5T4S7 5183 aa7.84□□□□□ -1.15
LSM2-208ENST00000375661 HSBP1O75506 76 aa7.83□□□□□ -1.16
LSM2-208ENST00000375661 PAPPA-AS1Q5QFB9 102 aa7.83□□□□□ -1.16
LSM2-208ENST00000375661 LINC00242Q5T6M2 205 aa7.83□□□□□ -1.16
LSM2-208ENST00000375661 FAM19A2Q8N3H0 131 aa7.83□□□□□ -1.16
LSM2-208ENST00000375661 C15orf56Q8N910 161 aa7.83□□□□□ -1.16
LSM2-208ENST00000375661 PKHD1L1Q86WI1 4243 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 IGHV3OR16-9A0A0B4J2B5 98 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.82□□□□□ -1.16
LSM2-208ENST00000375661 PRSS1P07477 247 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 COX6A2Q02221 97 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 FAM19A3Q7Z5A8 133 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 C2orf88Q9BSF0 95 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 CST9LQ9H4G1 147 aa7.82□□□□□ -1.16
LSM2-208ENST00000375661 C5orf38Q86SI9 138 aa7.81□□□□□ -1.16
LSM2-208ENST00000375661 ATP5LO75964 103 aa7.8□□□□□ -1.16
LSM2-208ENST00000375661 PMVKQ15126 192 aa7.8□□□□□ -1.16
LSM2-208ENST00000375661 Q6ZRU5 148 aa7.8□□□□□ -1.16
LSM2-208ENST00000375661 A0A0J9YXV3 536 aa7.79□□□□□ -1.16
LSM2-208ENST00000375661 COX7A2LO14548 114 aa7.79□□□□□ -1.16
LSM2-208ENST00000375661 SLPIP03973 132 aa7.79□□□□□ -1.16
LSM2-208ENST00000375661 MT1HL1P0DM35 61 aa7.79□□□□□ -1.16
LSM2-208ENST00000375661 HNRNPA3P51991 378 aaKnown RBP7.79□□□□□ -1.16
LSM2-208ENST00000375661 COA6Q5JTJ3 125 aaKnown RBP7.79□□□□□ -1.16
LSM2-208ENST00000375661 CFAP161Q6P656 301 aa7.79□□□□□ -1.16
LSM2-208ENST00000375661 IGHV1-58A0A0C4DH39 117 aa7.78□□□□□ -1.16
LSM2-208ENST00000375661 HIGD2BQ4VC39 106 aa7.78□□□□□ -1.16
LSM2-208ENST00000375661 IFI27L1Q96BM0 104 aa7.78□□□□□ -1.16
LSM2-208ENST00000375661 A0A087WZ39 114 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 GVQW2A0A096LPI5 108 aaPredicted RBP7.77□□□□□ -1.17
LSM2-208ENST00000375661 TINCRA0A1B0GVN0 87 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 hDV102S1A0JD36 115 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 NDUFA6P56556 154 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 C9orf163Q8N9P6 203 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 LINC00526Q96FQ7 95 aa7.77□□□□□ -1.17
LSM2-208ENST00000375661 IGHV3-64A0A075B6Q5 118 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 LEPROTL1O95214 131 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 MALP21145 153 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 HERVK_113P63121 156 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 SEC11AP67812 179 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 CDKN2A-AS1Q9UH64 79 aa7.76□□□□□ -1.17
LSM2-208ENST00000375661 IGLV4-69A0A075B6H9 119 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 IGLV5-45A0A087WSX0 123 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 TRAV12-1A0A0B4J245 112 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 IGLC3P0DOY3 106 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 FABP4P15090 132 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 CNBPP62633 177 aaKnown RBP7.75□□□□□ -1.17
LSM2-208ENST00000375661 LINC01561Q8N1V8 128 aa7.75□□□□□ -1.17
LSM2-208ENST00000375661 GEMIN7Q9H840 131 aaKnown RBP7.75□□□□□ -1.17
LSM2-208ENST00000375661 APOMO95445 188 aa7.74□□□□□ -1.17
LSM2-208ENST00000375661 ORAOV1Q8WV07 137 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms