RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 Q6ZVQ6 151 aa10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 ODF3Q96PU9 254 aa10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 C11orf21Q9P2W6 132 aa10.8□□□□□ -0.68
NOTCH4-201ENST00000375023 COL4A4P53420 1690 aaPredicted RBP10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 PRYO14603 147 aa10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 MUC4Q99102 2169 aa10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 IBA57-AS1B1ANH7 110 aa10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 RNASE3P12724 160 aaKnown RBP10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 LINC00959A0A1B0GUT2 108 aa10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 SMIM11BQ8TCY0 68 aa10.79□□□□□ -0.68
NOTCH4-201ENST00000375023 PDE6GP18545 87 aa10.78□□□□□ -0.68
NOTCH4-201ENST00000375023 TRBV6-4A0A1B0GX49 114 aa10.78□□□□□ -0.68
NOTCH4-201ENST00000375023 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
NOTCH4-201ENST00000375023 RAI1Q7Z5J4 1906 aaPredicted RBP10.77□□□□□ -0.68
NOTCH4-201ENST00000375023 PRR3P79522 188 aaKnown RBP10.77□□□□□ -0.68
NOTCH4-201ENST00000375023 AVPP01185 164 aa10.77□□□□□ -0.69
NOTCH4-201ENST00000375023 EIF4EBP1Q13541 118 aaPredicted RBP10.77□□□□□ -0.69
NOTCH4-201ENST00000375023 CELA1Q9UNI1 258 aa10.77□□□□□ -0.69
NOTCH4-201ENST00000375023 COL5A1P20908 1838 aaPredicted RBP10.76□□□□□ -0.69
NOTCH4-201ENST00000375023 H7C423 109 aa10.76□□□□□ -0.69
NOTCH4-201ENST00000375023 SPINK1P00995 79 aa10.76□□□□□ -0.69
NOTCH4-201ENST00000375023 PSMG3-AS1Q96PY0 264 aa10.75□□□□□ -0.69
NOTCH4-201ENST00000375023 CD164L2Q6UWJ8 174 aa10.74□□□□□ -0.69
NOTCH4-201ENST00000375023 LINC00574Q9H8X3 128 aa10.74□□□□□ -0.69
NOTCH4-201ENST00000375023 NRACQ8N912 160 aa10.73□□□□□ -0.69
NOTCH4-201ENST00000375023 LOC107984640A0A0U1RRK4 108 aa10.72□□□□□ -0.69
NOTCH4-201ENST00000375023 LELP1Q5T871 98 aa10.72□□□□□ -0.69
NOTCH4-201ENST00000375023 TET2Q6N021 2002 aaPredicted RBP10.72□□□□□ -0.69
NOTCH4-201ENST00000375023 M0R378 163 aa10.72□□□□□ -0.69
NOTCH4-201ENST00000375023 DEFB116Q30KQ4 102 aa10.72□□□□□ -0.69
NOTCH4-201ENST00000375023 FAM229AH3BQW9 127 aa10.71□□□□□ -0.69
NOTCH4-201ENST00000375023 CYSRT1A8MQ03 144 aa10.71□□□□□ -0.69
NOTCH4-201ENST00000375023 ZNF706Q9Y5V0 76 aaPredicted RBP10.71□□□□□ -0.69
NOTCH4-201ENST00000375023 LTBP2Q14767 1821 aa10.71□□□□□ -0.7
NOTCH4-201ENST00000375023 C16orf90A8MZG2 172 aa10.71□□□□□ -0.7
NOTCH4-201ENST00000375023 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
NOTCH4-201ENST00000375023 Q6ZTC4 211 aa10.7□□□□□ -0.7
NOTCH4-201ENST00000375023 M0QXV9 152 aa10.7□□□□□ -0.7
NOTCH4-201ENST00000375023 C6orf223Q8N319 242 aa10.7□□□□□ -0.7
NOTCH4-201ENST00000375023 A6NED7 52 aa10.69□□□□□ -0.7
NOTCH4-201ENST00000375023 COX6A2Q02221 97 aa10.69□□□□□ -0.7
NOTCH4-201ENST00000375023 EBI3Q14213 229 aa10.69□□□□□ -0.7
NOTCH4-201ENST00000375023 SERP1Q9Y6X1 66 aa10.69□□□□□ -0.7
NOTCH4-201ENST00000375023 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
NOTCH4-201ENST00000375023 TRBV27A0A0K0K1C4 114 aa10.68□□□□□ -0.7
NOTCH4-201ENST00000375023 ESRGQ1W209 222 aa10.68□□□□□ -0.7
NOTCH4-201ENST00000375023 ZNF73O43830 326 aaPredicted RBP10.67□□□□□ -0.7
NOTCH4-201ENST00000375023 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
NOTCH4-201ENST00000375023 UQCRQO14949 82 aa10.67□□□□□ -0.7
NOTCH4-201ENST00000375023 PRR15LQ9BU68 103 aa10.67□□□□□ -0.7
NOTCH4-201ENST00000375023 EML5Q05BV3 1969 aa10.66□□□□□ -0.7
NOTCH4-201ENST00000375023 ATG2AQ2TAZ0 1938 aa10.66□□□□□ -0.7
NOTCH4-201ENST00000375023 IGHV6-1A0A0B4J1U7 121 aa10.66□□□□□ -0.7
NOTCH4-201ENST00000375023 DHRS4-AS1Q9P1J3 65 aa10.66□□□□□ -0.7
NOTCH4-201ENST00000375023 C10orf25Q5T742 122 aa10.65□□□□□ -0.7
NOTCH4-201ENST00000375023 Q8N9L7 120 aa10.65□□□□□ -0.7
NOTCH4-201ENST00000375023 CCDC179H3BU77 68 aa10.65□□□□□ -0.71
NOTCH4-201ENST00000375023 MRGPRG-AS1Q2M3A8 158 aa10.65□□□□□ -0.71
NOTCH4-201ENST00000375023 IGLV4-60A0A075B6I1 120 aa10.64□□□□□ -0.71
NOTCH4-201ENST00000375023 ACACBO00763 2458 aa10.64□□□□□ -0.71
NOTCH4-201ENST00000375023 Q8N6K4 173 aa10.64□□□□□ -0.71
NOTCH4-201ENST00000375023 IGLV1-40P01703 118 aa10.64□□□□□ -0.71
NOTCH4-201ENST00000375023 FAM19A3Q7Z5A8 133 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 FAM240AA0A1B0GVK7 77 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 LINC00694P0DN24 101 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 CDC42SE2Q9NRR3 84 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 ZNF580Q9UK33 172 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 TTC28Q96AY4 2481 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 C2orf91Q6ZV80 131 aa10.63□□□□□ -0.71
NOTCH4-201ENST00000375023 NAV3Q8IVL0 2385 aa10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 KLLNB2CW77 178 aa10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 MDFIQ99750 246 aa10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 ANKHD1Q8IWZ3 2542 aaKnown RBP10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 A8MTW9 85 aa10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 PCOTHQ58A44 107 aa10.62□□□□□ -0.71
NOTCH4-201ENST00000375023 TRBV10-3A0A0K0K1G6 114 aa10.61□□□□□ -0.71
NOTCH4-201ENST00000375023 COX6B2Q6YFQ2 88 aa10.61□□□□□ -0.71
NOTCH4-201ENST00000375023 PYGO1Q9Y3Y4 419 aa10.61□□□□□ -0.71
NOTCH4-201ENST00000375023 A0A087WYN8 130 aa10.61□□□□□ -0.71
NOTCH4-201ENST00000375023 ODF3L2Q3SX64 289 aa10.61□□□□□ -0.71
NOTCH4-201ENST00000375023 MRPL55Q7Z7F7 128 aaKnown RBP10.6□□□□□ -0.71
NOTCH4-201ENST00000375023 SOSTDC1Q6X4U4 206 aa10.6□□□□□ -0.71
NOTCH4-201ENST00000375023 ABCA2Q9BZC7 2435 aa10.6□□□□□ -0.71
NOTCH4-201ENST00000375023 RPL28P46779 137 aaKnown RBP10.6□□□□□ -0.71
NOTCH4-201ENST00000375023 TIMM17BO60830 172 aa10.59□□□□□ -0.71
NOTCH4-201ENST00000375023 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
NOTCH4-201ENST00000375023 REG3GQ6UW15 175 aa10.59□□□□□ -0.71
NOTCH4-201ENST00000375023 A0A087WVE0 104 aa10.59□□□□□ -0.71
NOTCH4-201ENST00000375023 SPACA4Q8TDM5 124 aa10.59□□□□□ -0.71
NOTCH4-201ENST00000375023 LST1O00453 97 aa10.58□□□□□ -0.72
NOTCH4-201ENST00000375023 POLR2KP53803 58 aaKnown RBP10.58□□□□□ -0.72
NOTCH4-201ENST00000375023 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
NOTCH4-201ENST00000375023 Q6ZSN1 163 aa10.57□□□□□ -0.72
NOTCH4-201ENST00000375023 PIEZO2Q9H5I5 2752 aa10.57□□□□□ -0.72
NOTCH4-201ENST00000375023 ATP5EP2Q5VTU8 51 aa10.57□□□□□ -0.72
NOTCH4-201ENST00000375023 SERP2Q8N6R1 65 aa10.57□□□□□ -0.72
NOTCH4-201ENST00000375023 LINC00208Q96KT6 92 aa10.57□□□□□ -0.72
NOTCH4-201ENST00000375023 LINC00242Q5T6M2 205 aa10.56□□□□□ -0.72
NOTCH4-201ENST00000375023 AGRNO00468 2067 aa10.56□□□□□ -0.72
NOTCH4-201ENST00000375023 SBSPONQ8IVN8 264 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms