RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 FAM229BQ4G0N7 80 aa5.57□□□□□ -1.52
HLA-DRA-201ENST00000374982 GAGE2EQ4V326 116 aa5.57□□□□□ -1.52
HLA-DRA-201ENST00000374982 RASL11AQ6T310 242 aa5.57□□□□□ -1.52
HLA-DRA-201ENST00000374982 GAGE2DQ9UEU5 116 aa5.57□□□□□ -1.52
HLA-DRA-201ENST00000374982 IGKV2D-26A0A0A0MRZ7 120 aa5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 LTAP01374 205 aa5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 S100A9P06702 114 aaKnown RBP5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 SRP19P09132 144 aaKnown RBP5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 PNRC1Q12796 327 aaPredicted RBP5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 CST9LP1Q5W188 147 aa5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 OR2D3Q8NGH3 330 aa5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 IMMP2LQ96T52 175 aa5.56□□□□□ -1.52
HLA-DRA-201ENST00000374982 FLGP20930 4061 aaPredicted RBP5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 H7C423 109 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 COX7A2LO14548 114 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 PAGE4O60829 102 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 TLX1NBP0CAT3 122 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 AKR1C3P42330 323 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 CEBPGP53567 150 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 RHEBQ15382 184 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 TMEM241Q24JQ0 296 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 NIT2Q9NQR4 276 aa5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 MRPL35Q9NZE8 188 aaKnown RBP5.55□□□□□ -1.52
HLA-DRA-201ENST00000374982 IGLV8-61A0A075B6I0 122 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 ZNF727A8MUV8 499 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 TNFRSF6BO95407 300 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 CXCL1P09341 107 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 OR5AL1P0C617 328 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 ZNF25P17030 456 aaPredicted RBP5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 NTF3P20783 257 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 SPAG11BQ08648 103 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 KRTAP4-9Q9BYQ8 210 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 SMCO4Q9NRQ5 59 aa5.54□□□□□ -1.52
HLA-DRA-201ENST00000374982 C9JQL5 133 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 MT-ND4LP03901 98 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 CFC1P0CG37 223 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 C10orf25Q5T742 122 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 SMIM7Q9BQ49 75 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 NAT8Q9UHE5 227 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 UBE2D4Q9Y2X8 147 aa5.53□□□□□ -1.52
HLA-DRA-201ENST00000374982 C7orf77A4D0Y5 90 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 BCE1O60756 84 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 KRTAP20-1Q3LI63 56 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 DAND5Q8N907 189 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 TMEM101Q96IK0 257 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 BTF3L4Q96K17 158 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 RPS10P5Q9NQ39 176 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 TMEM242Q9NWH2 141 aa5.52□□□□□ -1.53
HLA-DRA-201ENST00000374982 PPP1R2P9O14990 202 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 APCSP02743 223 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 ADCYAP1P18509 176 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 PCOTHQ58A44 107 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 C9orf129Q5T035 196 aaKnown RBP5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 SPAG11AQ6PDA7 123 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 COX6B2Q6YFQ2 88 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 C3orf22Q8N5N4 141 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 C6orf48Q9UBA6 75 aa5.51□□□□□ -1.53
HLA-DRA-201ENST00000374982 NDUFA1O15239 70 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 NCR2O95944 276 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 S100PP25815 95 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 CTRLP40313 264 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 C5orf38Q86SI9 138 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 BAGE2Q86Y30 109 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 C11orf52Q96A22 123 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 KIR2DL4Q99706 377 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 BIN3Q9NQY0 253 aa5.5□□□□□ -1.53
HLA-DRA-201ENST00000374982 RPL35P42766 123 aaKnown RBP5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 ADIRFQ15847 76 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 UNQ6190/PRO20217Q6UXQ8 127 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 OR10D4PQ8NGN7 298 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 ANAPC16Q96DE5 110 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 SMIM12Q96EX1 92 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 CDC42SE2Q9NRR3 84 aa5.49□□□□□ -1.53
HLA-DRA-201ENST00000374982 C1orf196B1AJZ1 125 aa5.48□□□□□ -1.53
HLA-DRA-201ENST00000374982 SCO1O75880 301 aa5.48□□□□□ -1.53
HLA-DRA-201ENST00000374982 GNG4P50150 75 aa5.48□□□□□ -1.53
HLA-DRA-201ENST00000374982 C22orf24Q9Y442 160 aa5.48□□□□□ -1.53
HLA-DRA-201ENST00000374982 F8WDY8 70 aa5.47□□□□□ -1.53
HLA-DRA-201ENST00000374982 RPS20P60866 119 aaKnown RBP5.47□□□□□ -1.53
HLA-DRA-201ENST00000374982 ORAOV1Q8WV07 137 aa5.47□□□□□ -1.53
HLA-DRA-201ENST00000374982 KRTAP9-8Q9BYQ0 159 aa5.47□□□□□ -1.53
HLA-DRA-201ENST00000374982 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
HLA-DRA-201ENST00000374982 RPL23P62829 140 aaKnown RBP5.46□□□□□ -1.54
HLA-DRA-201ENST00000374982 CENPWQ5EE01 88 aa5.46□□□□□ -1.54
HLA-DRA-201ENST00000374982 LINC01551Q86U37 167 aa5.46□□□□□ -1.54
HLA-DRA-201ENST00000374982 KRTAP13-1Q8IUC0 172 aa5.46□□□□□ -1.54
HLA-DRA-201ENST00000374982 XKRY2A2RUG3 117 aa5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 IGLC6P0CF74 106 aa5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 LBHQ53QV2 105 aaPredicted RBP5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 CBLN2Q8IUK8 224 aa5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 OCC1Q8TAD7 63 aa5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 TPPP3Q9BW30 176 aa5.45□□□□□ -1.54
HLA-DRA-201ENST00000374982 TRAV9-1A0A075B6T8 112 aa5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 COLCA2A8K830 154 aa5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 NDUFC2-KCTD14E9PQ53 114 aa5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 MRPL52Q86TS9 123 aaKnown RBP5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 GATD1Q8NB37 220 aa5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 RPL39LQ96EH5 51 aaKnown RBP5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 OSTCQ9NRP0 149 aa5.44□□□□□ -1.54
HLA-DRA-201ENST00000374982 NDUFA12Q9UI09 145 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms