RNA–Protein interactions for RNA: ENST00000374685.8

RXRB-202, Transcript of retinoid X receptor beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RXRB, Length 2,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-202ENST00000374685 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
RXRB-202ENST00000374685 EDA2RQ9HAV5 297 aa13.04□□□□□ -0.32
RXRB-202ENST00000374685 PLAC8L1A1L4L8 177 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 DEFB4AO15263 64 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 IL17DQ8TAD2 202 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 IGKV3OR2-268A0A0C4DH90 116 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 CMC4P56277 68 aaPredicted RBP13.03□□□□□ -0.32
RXRB-202ENST00000374685 C16orf74Q96GX8 76 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 CSDC2Q9Y534 153 aaKnown RBP13.03□□□□□ -0.32
RXRB-202ENST00000374685 TRAV13-1A0A0B4J241 112 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 DNAJC30Q96LL9 226 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 TIMM21Q9BVV7 248 aa13.03□□□□□ -0.32
RXRB-202ENST00000374685 C5orf47Q569G3 176 aa13.02□□□□□ -0.33
RXRB-202ENST00000374685 CSNK1G2-AS1Q8NCQ2 148 aa13.02□□□□□ -0.33
RXRB-202ENST00000374685 AMELXQ99217 191 aa13.02□□□□□ -0.33
RXRB-202ENST00000374685 PYGO1Q9Y3Y4 419 aa13.02□□□□□ -0.33
RXRB-202ENST00000374685 IGHV3-33P01772 117 aa13.01□□□□□ -0.33
RXRB-202ENST00000374685 IGHV3-30-3P0DP02 117 aa13.01□□□□□ -0.33
RXRB-202ENST00000374685 NPC2P61916 151 aa13.01□□□□□ -0.33
RXRB-202ENST00000374685 LINC01620Q4KN68 170 aa13.01□□□□□ -0.33
RXRB-202ENST00000374685 NTM-AS1Q6ZSK4 140 aa13.01□□□□□ -0.33
RXRB-202ENST00000374685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.01□□□□□ -0.33
RXRB-202ENST00000374685 TEX49A0A1B0GTD5 131 aa13□□□□□ -0.33
RXRB-202ENST00000374685 LEPROTO15243 131 aa13□□□□□ -0.33
RXRB-202ENST00000374685 ATXN8Q156A1 80 aa13□□□□□ -0.33
RXRB-202ENST00000374685 STAB1Q9NY15 2570 aa13□□□□□ -0.33
RXRB-202ENST00000374685 TRBV7-7A0A0K0K1E9 115 aa12.99□□□□□ -0.33
RXRB-202ENST00000374685 TRBV10-2A0A0K0K1G8 114 aa12.99□□□□□ -0.33
RXRB-202ENST00000374685 DAZ2Q13117 558 aaKnown RBP12.99□□□□□ -0.33
RXRB-202ENST00000374685 CHCHD5Q9BSY4 110 aa12.99□□□□□ -0.33
RXRB-202ENST00000374685 H7C2G1 150 aa12.98□□□□□ -0.33
RXRB-202ENST00000374685 CDKN2A-AS1Q9UH64 79 aa12.98□□□□□ -0.33
RXRB-202ENST00000374685 PRSS2P07478 247 aa12.98□□□□□ -0.33
RXRB-202ENST00000374685 UBE2WQ96B02 151 aa12.98□□□□□ -0.33
RXRB-202ENST00000374685 MRPS36P82909 103 aaKnown RBP12.98□□□□□ -0.33
RXRB-202ENST00000374685 A0A096LPF7 62 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 FAM240AA0A1B0GVK7 77 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 EIF4EBP3O60516 100 aaPredicted RBP12.97□□□□□ -0.33
RXRB-202ENST00000374685 COX6A2Q02221 97 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 MAST4O15021 2626 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 A0A0B4J2C4 111 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 A0A0U1RRA0 63 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 DEFB135Q30KP9 77 aa12.97□□□□□ -0.33
RXRB-202ENST00000374685 UBE2L6O14933 153 aa12.96□□□□□ -0.33
RXRB-202ENST00000374685 ZNF625Q96I27 306 aaPredicted RBP12.96□□□□□ -0.33
RXRB-202ENST00000374685 A4D1N5 150 aa12.95□□□□□ -0.34
RXRB-202ENST00000374685 C3orf56Q8N813 242 aa12.95□□□□□ -0.34
RXRB-202ENST00000374685 NDUFA12Q9UI09 145 aa12.94□□□□□ -0.34
RXRB-202ENST00000374685 TRBV10-1A0A0K0K1A3 114 aa12.94□□□□□ -0.34
RXRB-202ENST00000374685 DAND5Q8N907 189 aa12.94□□□□□ -0.34
RXRB-202ENST00000374685 DAZ4Q86SG3 579 aaKnown RBP12.94□□□□□ -0.34
RXRB-202ENST00000374685 DAZ3Q9NR90 486 aaKnown RBP12.94□□□□□ -0.34
RXRB-202ENST00000374685 A0A0J9YXY3 114 aa12.93□□□□□ -0.34
RXRB-202ENST00000374685 TINCRA0A1B0GVN0 87 aa12.93□□□□□ -0.34
RXRB-202ENST00000374685 MUSTN1Q8IVN3 82 aa12.93□□□□□ -0.34
RXRB-202ENST00000374685 IGHV1-58A0A0C4DH39 117 aa12.92□□□□□ -0.34
RXRB-202ENST00000374685 DEFB121Q5J5C9 76 aa12.92□□□□□ -0.34
RXRB-202ENST00000374685 TRBV30A0A0K0K1B3 111 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 FHL2Q14192 279 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 C9orf66Q5T8R8 295 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 VSIG2Q96IQ7 327 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 TMEM243Q9BU79 118 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 SPANXDQ9BXN6 97 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 IMUPQ9GZP8 106 aa12.91□□□□□ -0.34
RXRB-202ENST00000374685 SMIM9A6NGZ8 99 aa12.9□□□□□ -0.34
RXRB-202ENST00000374685 TMEM101Q96IK0 257 aa12.9□□□□□ -0.34
RXRB-202ENST00000374685 WIPF1O43516 503 aa12.9□□□□□ -0.34
RXRB-202ENST00000374685 LINC00242Q5T6M2 205 aa12.9□□□□□ -0.34
RXRB-202ENST00000374685 C2orf82Q6UX34 121 aa12.9□□□□□ -0.34
RXRB-202ENST00000374685 H3BT86 120 aa12.89□□□□□ -0.35
RXRB-202ENST00000374685 OVOL2Q9BRP0 275 aa12.89□□□□□ -0.35
RXRB-202ENST00000374685 PKD1L1Q8TDX9 2849 aa12.89□□□□□ -0.35
RXRB-202ENST00000374685 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.89□□□□□ -0.35
RXRB-202ENST00000374685 ADAMTSL4-AS1Q5T5F5 129 aa12.89□□□□□ -0.35
RXRB-202ENST00000374685 C3orf22Q8N5N4 141 aa12.89□□□□□ -0.35
RXRB-202ENST00000374685 A0A1B0GX51 115 aa12.88□□□□□ -0.35
RXRB-202ENST00000374685 TRBV6-4A0A1B0GX49 114 aa12.88□□□□□ -0.35
RXRB-202ENST00000374685 C9orf153Q5TBE3 101 aa12.88□□□□□ -0.35
RXRB-202ENST00000374685 FAM222AQ5U5X8 452 aa12.88□□□□□ -0.35
RXRB-202ENST00000374685 X6R8D5 127 aa12.88□□□□□ -0.35
RXRB-202ENST00000374685 H7C423 109 aa12.87□□□□□ -0.35
RXRB-202ENST00000374685 GYPEP15421 78 aa12.87□□□□□ -0.35
RXRB-202ENST00000374685 J3KT08 172 aa12.87□□□□□ -0.35
RXRB-202ENST00000374685 Q1RN00 199 aa12.87□□□□□ -0.35
RXRB-202ENST00000374685 CDC42SE2Q9NRR3 84 aa12.87□□□□□ -0.35
RXRB-202ENST00000374685 LOC107984640A0A0U1RRK4 108 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 FAM236AA0A1B0GUQ0 79 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 FAM236BA0A1B0GV22 79 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 NOTCH1P46531 2555 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 UQCRQO14949 82 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 TRIAP1O43715 76 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 HTN3P15516 51 aa12.86□□□□□ -0.35
RXRB-202ENST00000374685 IGLV4-60A0A075B6I1 120 aa12.85□□□□□ -0.35
RXRB-202ENST00000374685 CLPSL2Q6UWE3 100 aa12.85□□□□□ -0.35
RXRB-202ENST00000374685 HERVK_113P63121 156 aa12.85□□□□□ -0.35
RXRB-202ENST00000374685 LINC00526Q96FQ7 95 aa12.85□□□□□ -0.35
RXRB-202ENST00000374685 Q9H8V8 135 aa12.85□□□□□ -0.35
RXRB-202ENST00000374685 FBN1P35555 2871 aaKnown RBP12.84□□□□□ -0.35
RXRB-202ENST00000374685 FAM19A5Q7Z5A7 132 aaPredicted RBP12.84□□□□□ -0.35
RXRB-202ENST00000374685 TOMM7Q9P0U1 55 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms