RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 SMIM11BQ8TCY0 68 aa10.54□□□□□ -0.72
TRAF1-201ENST00000373887 EDN2P20800 178 aa10.54□□□□□ -0.72
TRAF1-201ENST00000373887 DHRS4-AS1Q9P1J3 65 aa10.54□□□□□ -0.72
TRAF1-201ENST00000373887 P0C879 139 aa10.54□□□□□ -0.72
TRAF1-201ENST00000373887 CLUHP3Q96NS8 147 aa10.54□□□□□ -0.72
TRAF1-201ENST00000373887 M0R378 163 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 MIFP14174 115 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 RNF185Q96GF1 192 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 C11orf1Q9H5F2 150 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 CRIP1P50238 77 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 MBD6Q96DN6 1003 aa10.53□□□□□ -0.72
TRAF1-201ENST00000373887 GOLGB1Q14789 3259 aaKnown RBP10.53□□□□□ -0.72
TRAF1-201ENST00000373887 TRAV10A0A0B4J240 114 aa10.52□□□□□ -0.72
TRAF1-201ENST00000373887 Q6Q795 121 aa10.52□□□□□ -0.73
TRAF1-201ENST00000373887 NCOR2Q9Y618 2525 aa10.52□□□□□ -0.73
TRAF1-201ENST00000373887 RBX1P62877 108 aa10.52□□□□□ -0.73
TRAF1-201ENST00000373887 EBI3Q14213 229 aa10.52□□□□□ -0.73
TRAF1-201ENST00000373887 SOSTDC1Q6X4U4 206 aa10.52□□□□□ -0.73
TRAF1-201ENST00000373887 TRBV6-4A0A1B0GX49 114 aa10.51□□□□□ -0.73
TRAF1-201ENST00000373887 ESRGQ1W209 222 aa10.51□□□□□ -0.73
TRAF1-201ENST00000373887 LINC00694P0DN24 101 aa10.5□□□□□ -0.73
TRAF1-201ENST00000373887 KPRPQ5T749 579 aaPredicted RBP10.5□□□□□ -0.73
TRAF1-201ENST00000373887 IGLV4-69A0A075B6H9 119 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 TSHBP01222 138 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 LOC107984640A0A0U1RRK4 108 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 EIF4EBP1Q13541 118 aaPredicted RBP10.49□□□□□ -0.73
TRAF1-201ENST00000373887 CD164L2Q6UWJ8 174 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 COX7CP15954 63 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 PIEZO2Q9H5I5 2752 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 IGF2RP11717 2491 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 ARHGAP32A7KAX9 2087 aa10.49□□□□□ -0.73
TRAF1-201ENST00000373887 FSTL3O95633 263 aa10.48□□□□□ -0.73
TRAF1-201ENST00000373887 LINC00959A0A1B0GUT2 108 aa10.48□□□□□ -0.73
TRAF1-201ENST00000373887 ZNF295-AS1Q8N0V1 137 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 CIRBP-AS1Q8TBR5 109 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 ZNF73O43830 326 aaPredicted RBP10.47□□□□□ -0.73
TRAF1-201ENST00000373887 CACNA1AO00555 2505 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 A0A1W2PPR1 153 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 BRI3O95415 125 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 C10orf25Q5T742 122 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 SPINK1P00995 79 aa10.47□□□□□ -0.73
TRAF1-201ENST00000373887 LST1O00453 97 aa10.46□□□□□ -0.73
TRAF1-201ENST00000373887 U3KQK5 164 aa10.46□□□□□ -0.73
TRAF1-201ENST00000373887 PMAIP1Q13794 54 aa10.46□□□□□ -0.74
TRAF1-201ENST00000373887 Q8N6K4 173 aa10.45□□□□□ -0.74
TRAF1-201ENST00000373887 LINC00208Q96KT6 92 aa10.45□□□□□ -0.74
TRAF1-201ENST00000373887 XGP55808 180 aa10.45□□□□□ -0.74
TRAF1-201ENST00000373887 TRBV7-6A0A0J9YX20 115 aa10.44□□□□□ -0.74
TRAF1-201ENST00000373887 IGHV6-1A0A0B4J1U7 121 aa10.44□□□□□ -0.74
TRAF1-201ENST00000373887 RAI1Q7Z5J4 1906 aaPredicted RBP10.44□□□□□ -0.74
TRAF1-201ENST00000373887 PRR9Q5T870 116 aa10.44□□□□□ -0.74
TRAF1-201ENST00000373887 PCOTHQ58A44 107 aa10.43□□□□□ -0.74
TRAF1-201ENST00000373887 ATRXP46100 2492 aa10.43□□□□□ -0.74
TRAF1-201ENST00000373887 IGLV1-40P01703 118 aa10.43□□□□□ -0.74
TRAF1-201ENST00000373887 LELP1Q5T871 98 aa10.43□□□□□ -0.74
TRAF1-201ENST00000373887 LRP4O75096 1905 aa10.43□□□□□ -0.74
TRAF1-201ENST00000373887 CCDC168Q8NDH2 2452 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 NRACQ8N912 160 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 IMUPQ9GZP8 106 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 PYGO1Q9Y3Y4 419 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 COL5A1P20908 1838 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-201ENST00000373887 C2orf91Q6ZV80 131 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 M0QXV9 152 aa10.42□□□□□ -0.74
TRAF1-201ENST00000373887 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
TRAF1-201ENST00000373887 PRYO14603 147 aa10.41□□□□□ -0.74
TRAF1-201ENST00000373887 BEAN1Q3B7T3 259 aa10.41□□□□□ -0.74
TRAF1-201ENST00000373887 PSPHP1O15172 72 aa10.41□□□□□ -0.74
TRAF1-201ENST00000373887 GAS8-AS1O95177 125 aa10.41□□□□□ -0.74
TRAF1-201ENST00000373887 Q6JHZ5 121 aa10.4□□□□□ -0.74
TRAF1-201ENST00000373887 A0A087WVE0 104 aa10.4□□□□□ -0.74
TRAF1-201ENST00000373887 C9orf116Q5BN46 136 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-201ENST00000373887 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-201ENST00000373887 CYSRT1A8MQ03 144 aa10.4□□□□□ -0.74
TRAF1-201ENST00000373887 SMIM26A0A096LP01 95 aa10.39□□□□□ -0.75
TRAF1-201ENST00000373887 ABCA2Q9BZC7 2435 aa10.39□□□□□ -0.75
TRAF1-201ENST00000373887 SORL1Q92673 2214 aa10.39□□□□□ -0.75
TRAF1-201ENST00000373887 IGLV2-11P01706 119 aa10.38□□□□□ -0.75
TRAF1-201ENST00000373887 COX17Q14061 63 aa10.38□□□□□ -0.75
TRAF1-201ENST00000373887 C11orf21Q9P2W6 132 aa10.38□□□□□ -0.75
TRAF1-201ENST00000373887 NAV2Q8IVL1 2488 aa10.38□□□□□ -0.75
TRAF1-201ENST00000373887 NTM-AS1Q6ZSK4 140 aa10.37□□□□□ -0.75
TRAF1-201ENST00000373887 LINC01547P58512 204 aaPredicted RBP10.37□□□□□ -0.75
TRAF1-201ENST00000373887 PRR3P79522 188 aaKnown RBP10.37□□□□□ -0.75
TRAF1-201ENST00000373887 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
TRAF1-201ENST00000373887 C1orf137Q5JT78 98 aa10.36□□□□□ -0.75
TRAF1-201ENST00000373887 PLXNB1O43157 2135 aa10.36□□□□□ -0.75
TRAF1-201ENST00000373887 CRIP2P52943 208 aaPredicted RBP10.36□□□□□ -0.75
TRAF1-201ENST00000373887 LINC00474Q9P2X8 69 aa10.36□□□□□ -0.75
TRAF1-201ENST00000373887 UNQ6190/PRO20217Q6UXQ8 127 aa10.36□□□□□ -0.75
TRAF1-201ENST00000373887 REG3GQ6UW15 175 aa10.36□□□□□ -0.75
TRAF1-201ENST00000373887 TRAV7A0A075B6U4 112 aa10.35□□□□□ -0.75
TRAF1-201ENST00000373887 A0A087WYN8 130 aa10.35□□□□□ -0.75
TRAF1-201ENST00000373887 Q8IZM0 81 aa10.35□□□□□ -0.75
TRAF1-201ENST00000373887 C6orf223Q8N319 242 aa10.35□□□□□ -0.75
TRAF1-201ENST00000373887 MRPS36P82909 103 aaKnown RBP10.34□□□□□ -0.75
TRAF1-201ENST00000373887 TRBV10-3A0A0K0K1G6 114 aa10.34□□□□□ -0.75
TRAF1-201ENST00000373887 RPL28P46779 137 aaKnown RBP10.34□□□□□ -0.75
TRAF1-201ENST00000373887 CDC42SE2Q9NRR3 84 aa10.33□□□□□ -0.76
TRAF1-201ENST00000373887 NUPR2A6NF83 97 aa10.33□□□□□ -0.76
TRAF1-201ENST00000373887 C10orf142B7Z368 130 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms