RNA–Protein interactions for RNA: ENST00000372216.8

COL4A6-202, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-202ENST00000372216 MRPL55Q7Z7F7 128 aaKnown RBP7.15□□□□□ -1.27
COL4A6-202ENST00000372216 TP73-AS1Q9UF72 201 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 V9GYY9 64 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 TRBV6-5A0A0K0K1A5 114 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 TSHBP01222 138 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 C9orf116Q5BN46 136 aaPredicted RBP7.14□□□□□ -1.27
COL4A6-202ENST00000372216 C6orf223Q8N319 242 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 SERP2Q8N6R1 65 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 TTC28Q96AY4 2481 aa7.14□□□□□ -1.27
COL4A6-202ENST00000372216 C11orf21Q9P2W6 132 aa7.13□□□□□ -1.27
COL4A6-202ENST00000372216 C1orf134Q5TEV5 83 aa7.13□□□□□ -1.27
COL4A6-202ENST00000372216 IBA57-AS1B1ANH7 110 aa7.13□□□□□ -1.27
COL4A6-202ENST00000372216 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
COL4A6-202ENST00000372216 CELA1Q9UNI1 258 aa7.12□□□□□ -1.27
COL4A6-202ENST00000372216 CD164L2Q6UWJ8 174 aa7.12□□□□□ -1.27
COL4A6-202ENST00000372216 CPAMD8Q8IZJ3 1885 aa7.12□□□□□ -1.27
COL4A6-202ENST00000372216 A6NED7 52 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 BDP1A6H8Y1 2624 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 LINC00959A0A1B0GUT2 108 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 ODF3L2Q3SX64 289 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 ATG2AQ2TAZ0 1938 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 TRBV27A0A0K0K1C4 114 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 Q6ZQY7 126 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 LINC00337Q8N6G1 96 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 Q6ZTC4 211 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 Q8N9L7 120 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 M0R378 163 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
COL4A6-202ENST00000372216 CREBBPQ92793 2442 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 MRGPRG-AS1Q2M3A8 158 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 LINC00308Q8TCZ7 52 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 G3V4G9 280 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 NRACQ8N912 160 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 PYGO1Q9Y3Y4 419 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 H3BT86 120 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 TNCP24821 2201 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 CRIP2P52943 208 aaPredicted RBP7.1□□□□□ -1.27
COL4A6-202ENST00000372216 CUL9Q8IWT3 2517 aa7.1□□□□□ -1.27
COL4A6-202ENST00000372216 PDE6GP18545 87 aa7.09□□□□□ -1.27
COL4A6-202ENST00000372216 PCOTHQ58A44 107 aa7.09□□□□□ -1.27
COL4A6-202ENST00000372216 PRR3P79522 188 aaKnown RBP7.09□□□□□ -1.27
COL4A6-202ENST00000372216 LINC00474Q9P2X8 69 aa7.09□□□□□ -1.27
COL4A6-202ENST00000372216 RPL28P46779 137 aaKnown RBP7.09□□□□□ -1.28
COL4A6-202ENST00000372216 REG3GQ6UW15 175 aa7.08□□□□□ -1.28
COL4A6-202ENST00000372216 SBSPONQ8IVN8 264 aa7.08□□□□□ -1.28
COL4A6-202ENST00000372216 DHRS4-AS1Q9P1J3 65 aa7.08□□□□□ -1.28
COL4A6-202ENST00000372216 TRIAP1O43715 76 aa7.08□□□□□ -1.28
COL4A6-202ENST00000372216 ANKHD1Q8IWZ3 2542 aaKnown RBP7.07□□□□□ -1.28
COL4A6-202ENST00000372216 CYSRT1A8MQ03 144 aa7.07□□□□□ -1.28
COL4A6-202ENST00000372216 SMIM11BQ8TCY0 68 aa7.07□□□□□ -1.28
COL4A6-202ENST00000372216 MAPKAPK5-AS1Q8N8E1 139 aa7.07□□□□□ -1.28
COL4A6-202ENST00000372216 MRPS36P82909 103 aaKnown RBP7.06□□□□□ -1.28
COL4A6-202ENST00000372216 TIMM17BO60830 172 aa7.06□□□□□ -1.28
COL4A6-202ENST00000372216 MRPS12O15235 138 aaKnown RBP7.05□□□□□ -1.28
COL4A6-202ENST00000372216 UNQ6190/PRO20217Q6UXQ8 127 aa7.05□□□□□ -1.28
COL4A6-202ENST00000372216 GAS8-AS1O95177 125 aa7.05□□□□□ -1.28
COL4A6-202ENST00000372216 MT-ATP8P03928 68 aa7.05□□□□□ -1.28
COL4A6-202ENST00000372216 ZNF73O43830 326 aaPredicted RBP7.04□□□□□ -1.28
COL4A6-202ENST00000372216 COX6A2Q02221 97 aa7.04□□□□□ -1.28
COL4A6-202ENST00000372216 POLR2KP53803 58 aaKnown RBP7.04□□□□□ -1.28
COL4A6-202ENST00000372216 CDC42SE2Q9NRR3 84 aa7.04□□□□□ -1.28
COL4A6-202ENST00000372216 EXPH5Q8NEV8 1989 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 LST1O00453 97 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 PRRC2AP48634 2157 aaKnown RBP7.03□□□□□ -1.28
COL4A6-202ENST00000372216 NDUFC2-KCTD14E9PQ53 114 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 C2orf48Q96LS8 159 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 LINC00643Q86TS7 51 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 Q9BRP9 147 aa7.03□□□□□ -1.28
COL4A6-202ENST00000372216 ZNF580Q9UK33 172 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 HCFC1P51610 2035 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 SPACA4Q8TDM5 124 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 TRBV7-6A0A0J9YX20 115 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 PRLHP81277 87 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 COX17Q14061 63 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 PRR14LQ5THK1 2151 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 FHL2Q14192 279 aa7.02□□□□□ -1.29
COL4A6-202ENST00000372216 Q8IZM0 81 aa7.01□□□□□ -1.29
COL4A6-202ENST00000372216 IGKV2D-30A0A075B6S6 120 aa7.01□□□□□ -1.29
COL4A6-202ENST00000372216 IGKV2-30P06310 120 aa7.01□□□□□ -1.29
COL4A6-202ENST00000372216 COL4A2P08572 1712 aa7.01□□□□□ -1.29
COL4A6-202ENST00000372216 ARHGAP32A7KAX9 2087 aa7.01□□□□□ -1.29
COL4A6-202ENST00000372216 J3QL48 77 aa7□□□□□ -1.29
COL4A6-202ENST00000372216 SERTAD4-AS1Q5TG53 156 aa7□□□□□ -1.29
COL4A6-202ENST00000372216 BEAN1Q3B7T3 259 aa7□□□□□ -1.29
COL4A6-202ENST00000372216 FAM240AA0A1B0GVK7 77 aa7□□□□□ -1.29
COL4A6-202ENST00000372216 YPEL4Q96NS1 127 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 TRBV10-3A0A0K0K1G6 114 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 CHTF8P0CG12 524 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 FAM19A3Q7Z5A8 133 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 LINC00208Q96KT6 92 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 TRBV30A0A0K0K1B3 111 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 ACACBO00763 2458 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 MDFIQ99750 246 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 LINC01547P58512 204 aaPredicted RBP6.99□□□□□ -1.29
COL4A6-202ENST00000372216 CHCHD7Q9BUK0 85 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 PTPN13Q12923 2485 aa6.99□□□□□ -1.29
COL4A6-202ENST00000372216 CNFNQ9BYD5 112 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 IGLV4-60A0A075B6I1 120 aa6.98□□□□□ -1.29
COL4A6-202ENST00000372216 EML5Q05BV3 1969 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms