RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 COPS9Q8WXC6 57 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 VPREB3Q9UKI3 123 aa9.24□□□□□ -0.93
CHD1L-202ENST00000369258 ACYP1P07311 99 aa9.23□□□□□ -0.93
CHD1L-202ENST00000369258 NTM-AS1Q6ZSK4 140 aa9.23□□□□□ -0.93
CHD1L-202ENST00000369258 A8MTW9 85 aa9.23□□□□□ -0.93
CHD1L-202ENST00000369258 FASNP49327 2511 aaKnown RBP9.23□□□□□ -0.93
CHD1L-202ENST00000369258 HECTD1Q9ULT8 2610 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 INSP01308 110 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 BEAN1Q3B7T3 259 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 Q96MF0 132 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 FAM218AQ96MZ4 157 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 PRORYQ9H606 182 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 HIST2H2BCQ6DN03 193 aa9.22□□□□□ -0.93
CHD1L-202ENST00000369258 FAM236AA0A1B0GUQ0 79 aa9.21□□□□□ -0.93
CHD1L-202ENST00000369258 FAM236BA0A1B0GV22 79 aa9.21□□□□□ -0.93
CHD1L-202ENST00000369258 SMIM1B2RUZ4 78 aa9.21□□□□□ -0.93
CHD1L-202ENST00000369258 BAALC-AS2P0C853 105 aa9.21□□□□□ -0.93
CHD1L-202ENST00000369258 DAZ2Q13117 558 aaKnown RBP9.21□□□□□ -0.93
CHD1L-202ENST00000369258 DAZ4Q86SG3 579 aaKnown RBP9.21□□□□□ -0.93
CHD1L-202ENST00000369258 DAZ3Q9NR90 486 aaKnown RBP9.21□□□□□ -0.93
CHD1L-202ENST00000369258 SHISA2Q6UWI4 295 aa9.21□□□□□ -0.94
CHD1L-202ENST00000369258 LINC01356Q8N9X3 169 aa9.21□□□□□ -0.94
CHD1L-202ENST00000369258 NOP10Q9NPE3 64 aaKnown RBP9.21□□□□□ -0.94
CHD1L-202ENST00000369258 TEP1Q99973 2627 aaKnown RBP9.2□□□□□ -0.94
CHD1L-202ENST00000369258 ODF3L2Q3SX64 289 aa9.2□□□□□ -0.94
CHD1L-202ENST00000369258 C9orf129Q5T035 196 aaKnown RBP9.2□□□□□ -0.94
CHD1L-202ENST00000369258 TRACP01848 142 aa9.19□□□□□ -0.94
CHD1L-202ENST00000369258 RPL35AP18077 110 aaKnown RBP9.19□□□□□ -0.94
CHD1L-202ENST00000369258 PEMTQ9UBM1 199 aa9.19□□□□□ -0.94
CHD1L-202ENST00000369258 RPL36AP83881 106 aaKnown RBP9.19□□□□□ -0.94
CHD1L-202ENST00000369258 C1orf158Q8N1D5 194 aa9.19□□□□□ -0.94
CHD1L-202ENST00000369258 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
CHD1L-202ENST00000369258 RPL36ALQ969Q0 106 aaKnown RBP9.19□□□□□ -0.94
CHD1L-202ENST00000369258 ATRQ13535 2644 aa9.19□□□□□ -0.94
CHD1L-202ENST00000369258 LINC00643Q86TS7 51 aa9.18□□□□□ -0.94
CHD1L-202ENST00000369258 IMUPQ9GZP8 106 aa9.18□□□□□ -0.94
CHD1L-202ENST00000369258 HIVEP1P15822 2718 aa9.18□□□□□ -0.94
CHD1L-202ENST00000369258 CLPSL2Q6UWE3 100 aa9.18□□□□□ -0.94
CHD1L-202ENST00000369258 UNC79Q9P2D8 2635 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 ATP5G1P05496 136 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 DSCR9P59020 149 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 HERV-K104P63124 156 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 DEFB114Q30KQ6 69 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 OTOGQ6ZRI0 2925 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 A0A096LPF7 62 aa9.17□□□□□ -0.94
CHD1L-202ENST00000369258 A0A096LNT2 108 aa9.16□□□□□ -0.94
CHD1L-202ENST00000369258 PFN2P35080 140 aa9.16□□□□□ -0.94
CHD1L-202ENST00000369258 Q6YL49 198 aa9.16□□□□□ -0.94
CHD1L-202ENST00000369258 FAM110AQ9BQ89 295 aa9.16□□□□□ -0.94
CHD1L-202ENST00000369258 STHQ8IWL8 128 aa9.16□□□□□ -0.94
CHD1L-202ENST00000369258 J3QLI3 93 aa9.15□□□□□ -0.94
CHD1L-202ENST00000369258 GAGE2AQ6NT46 116 aa9.15□□□□□ -0.94
CHD1L-202ENST00000369258 CDC42SE2Q9NRR3 84 aa9.15□□□□□ -0.94
CHD1L-202ENST00000369258 CSDC2Q9Y534 153 aaKnown RBP9.15□□□□□ -0.94
CHD1L-202ENST00000369258 F5H768 121 aa9.15□□□□□ -0.94
CHD1L-202ENST00000369258 K7EQD1 137 aa9.15□□□□□ -0.94
CHD1L-202ENST00000369258 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.95
CHD1L-202ENST00000369258 FAM19A3Q7Z5A8 133 aa9.15□□□□□ -0.95
CHD1L-202ENST00000369258 UBE2L6O14933 153 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 CRPP02741 224 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 SLPIP03973 132 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 INAFM2P0DMQ5 153 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 C5orf38Q86SI9 138 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 TMEM126AQ9H061 195 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 ANK3Q12955 4377 aaKnown RBP9.14□□□□□ -0.95
CHD1L-202ENST00000369258 TRAV13-2A0A0B4J235 113 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 TRBV10-1A0A0K0K1A3 114 aa9.14□□□□□ -0.95
CHD1L-202ENST00000369258 IGLV4-60A0A075B6I1 120 aa9.13□□□□□ -0.95
CHD1L-202ENST00000369258 TRGV2A0A075B6R0 118 aa9.13□□□□□ -0.95
CHD1L-202ENST00000369258 C9orf153Q5TBE3 101 aa9.13□□□□□ -0.95
CHD1L-202ENST00000369258 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
CHD1L-202ENST00000369258 MIR7-3HGQ8N6C7 128 aa9.13□□□□□ -0.95
CHD1L-202ENST00000369258 LINC00337Q8N6G1 96 aa9.12□□□□□ -0.95
CHD1L-202ENST00000369258 BBC3Q96PG8 261 aaPredicted RBP9.12□□□□□ -0.95
CHD1L-202ENST00000369258 C22orf24Q9Y442 160 aa9.12□□□□□ -0.95
CHD1L-202ENST00000369258 MALP21145 153 aa9.12□□□□□ -0.95
CHD1L-202ENST00000369258 PRR3P79522 188 aaKnown RBP9.12□□□□□ -0.95
CHD1L-202ENST00000369258 TMEM243Q9BU79 118 aa9.12□□□□□ -0.95
CHD1L-202ENST00000369258 ESM1Q9NQ30 184 aa9.12□□□□□ -0.95
CHD1L-202ENST00000369258 A0A087WYN8 130 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 DNAL4O96015 105 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 PF4P02776 101 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 RPL28P46779 137 aaKnown RBP9.11□□□□□ -0.95
CHD1L-202ENST00000369258 C4orf3Q8WVX3 66 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 SND1-IT1Q9HBX3 110 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 LINC00158P58513 81 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 C3orf22Q8N5N4 141 aa9.11□□□□□ -0.95
CHD1L-202ENST00000369258 KLK5Q9Y337 293 aaPredicted RBP9.11□□□□□ -0.95
CHD1L-202ENST00000369258 COX7B2Q8TF08 81 aa9.1□□□□□ -0.95
CHD1L-202ENST00000369258 DEFB130BP0DP73 79 aa9.1□□□□□ -0.95
CHD1L-202ENST00000369258 DEFB130AP0DP74 79 aa9.1□□□□□ -0.95
CHD1L-202ENST00000369258 SDIM1Q6ZPB5 146 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 Q8N3U1 123 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 IGKV2-28A0A075B6P5 120 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 UQCRQO14949 82 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 IGKV2D-28P01615 120 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 IL17DQ8TAD2 202 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 C14orf132Q9NPU4 83 aa9.09□□□□□ -0.95
CHD1L-202ENST00000369258 GIG44P09565 113 aaPredicted RBP9.08□□□□□ -0.96
CHD1L-202ENST00000369258 CXCL5P42830 114 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms