RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 OPRPNQ99935 248 aaPredicted RBP11.93□□□□□ -0.5
CHTOP-202ENST00000368687 VCX2Q9H322 139 aa11.93□□□□□ -0.5
CHTOP-202ENST00000368687 FAT1Q14517 4588 aa11.93□□□□□ -0.5
CHTOP-202ENST00000368687 SLPIP03973 132 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 Q5VSD8 79 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 FA2HQ7L5A8 372 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 OR10D4PQ8NGN7 298 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 TOMM6Q96B49 74 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 DNAH8Q96JB1 4490 aa11.92□□□□□ -0.5
CHTOP-202ENST00000368687 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
CHTOP-202ENST00000368687 IGIPA6NJ69 53 aa11.91□□□□□ -0.5
CHTOP-202ENST00000368687 HAMPP81172 84 aa11.91□□□□□ -0.5
CHTOP-202ENST00000368687 F8WDY8 70 aa11.9□□□□□ -0.5
CHTOP-202ENST00000368687 SEC11AP67812 179 aa11.9□□□□□ -0.5
CHTOP-202ENST00000368687 CIRBP-AS1Q8TBR5 109 aa11.9□□□□□ -0.5
CHTOP-202ENST00000368687 CARD19Q96LW7 228 aa11.9□□□□□ -0.5
CHTOP-202ENST00000368687 AMELXQ99217 191 aa11.9□□□□□ -0.5
CHTOP-202ENST00000368687 SMR3BP02814 79 aaPredicted RBP11.89□□□□□ -0.51
CHTOP-202ENST00000368687 PLA2G1BP04054 148 aaKnown RBP11.89□□□□□ -0.51
CHTOP-202ENST00000368687 CIRBPQ14011 172 aaKnown RBP11.89□□□□□ -0.51
CHTOP-202ENST00000368687 ERASQ7Z444 233 aa11.89□□□□□ -0.51
CHTOP-202ENST00000368687 C5orf38Q86SI9 138 aa11.89□□□□□ -0.51
CHTOP-202ENST00000368687 C2orf48Q96LS8 159 aa11.89□□□□□ -0.51
CHTOP-202ENST00000368687 LINC00474Q9P2X8 69 aa11.89□□□□□ -0.51
CHTOP-202ENST00000368687 UBE2D1P51668 147 aa11.88□□□□□ -0.51
CHTOP-202ENST00000368687 SYCNQ0VAF6 134 aa11.88□□□□□ -0.51
CHTOP-202ENST00000368687 LINC00242Q5T6M2 205 aa11.87□□□□□ -0.51
CHTOP-202ENST00000368687 LINC01561Q8N1V8 128 aa11.87□□□□□ -0.51
CHTOP-202ENST00000368687 SCGB3A1Q96QR1 104 aa11.87□□□□□ -0.51
CHTOP-202ENST00000368687 IGLV4-69A0A075B6H9 119 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 A0A087WZ39 114 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 RAB5BP61020 215 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 LINC00528Q8N1L1 170 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 YPEL4Q96NS1 127 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 CAMK2N2Q96S95 79 aa11.86□□□□□ -0.51
CHTOP-202ENST00000368687 COX6A2Q02221 97 aa11.85□□□□□ -0.51
CHTOP-202ENST00000368687 LINC00173Q6ZV60 143 aa11.85□□□□□ -0.51
CHTOP-202ENST00000368687 ORAOV1Q8WV07 137 aa11.85□□□□□ -0.51
CHTOP-202ENST00000368687 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.85□□□□□ -0.51
CHTOP-202ENST00000368687 HERVK_113P63121 156 aa11.84□□□□□ -0.51
CHTOP-202ENST00000368687 C18orf32Q8TCD1 76 aa11.84□□□□□ -0.51
CHTOP-202ENST00000368687 SPACA4Q8TDM5 124 aa11.84□□□□□ -0.51
CHTOP-202ENST00000368687 DPH3Q96FX2 82 aa11.84□□□□□ -0.51
CHTOP-202ENST00000368687 LINC00614P0C842 121 aa11.83□□□□□ -0.52
CHTOP-202ENST00000368687 SLC7A5P1Q8MH63 180 aa11.83□□□□□ -0.52
CHTOP-202ENST00000368687 LINC00526Q96FQ7 95 aa11.83□□□□□ -0.52
CHTOP-202ENST00000368687 SRRM2Q9UQ35 2752 aaKnown RBP11.82□□□□□ -0.52
CHTOP-202ENST00000368687 RNF151Q2KHN1 245 aa11.82□□□□□ -0.52
CHTOP-202ENST00000368687 VPS13BQ7Z7G8 4022 aa11.82□□□□□ -0.52
CHTOP-202ENST00000368687 LOC107984640A0A0U1RRK4 108 aa11.81□□□□□ -0.52
CHTOP-202ENST00000368687 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.81□□□□□ -0.52
CHTOP-202ENST00000368687 NDUFA1O15239 70 aa11.81□□□□□ -0.52
CHTOP-202ENST00000368687 CBLN2Q8IUK8 224 aa11.81□□□□□ -0.52
CHTOP-202ENST00000368687 GEMIN7Q9H840 131 aaKnown RBP11.81□□□□□ -0.52
CHTOP-202ENST00000368687 Q6ZRU5 148 aa11.8□□□□□ -0.52
CHTOP-202ENST00000368687 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
CHTOP-202ENST00000368687 HBDP02042 147 aa11.79□□□□□ -0.52
CHTOP-202ENST00000368687 INAFM2P0DMQ5 153 aa11.79□□□□□ -0.52
CHTOP-202ENST00000368687 PLAC8Q9NZF1 115 aa11.79□□□□□ -0.52
CHTOP-202ENST00000368687 A0A087WYN8 130 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 IGKV2-24A0A0C4DH68 120 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 PANO1I0J062 215 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 CHTF8P0CG12 524 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 PMVKQ15126 192 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 MAJINQ3KP22 176 aa11.78□□□□□ -0.52
CHTOP-202ENST00000368687 PACRGQ96M98 296 aaPredicted RBP11.78□□□□□ -0.52
CHTOP-202ENST00000368687 PRSS2P07478 247 aa11.77□□□□□ -0.53
CHTOP-202ENST00000368687 ZC2HC1BQ5TFG8 222 aa11.77□□□□□ -0.53
CHTOP-202ENST00000368687 CHCHD1Q96BP2 118 aaKnown RBP11.77□□□□□ -0.53
CHTOP-202ENST00000368687 A0A096LNI7 61 aa11.76□□□□□ -0.53
CHTOP-202ENST00000368687 TINCRA0A1B0GVN0 87 aa11.76□□□□□ -0.53
CHTOP-202ENST00000368687 ATP5LO75964 103 aa11.76□□□□□ -0.53
CHTOP-202ENST00000368687 CST9LQ9H4G1 147 aa11.76□□□□□ -0.53
CHTOP-202ENST00000368687 PTTG1IPP53801 180 aa11.75□□□□□ -0.53
CHTOP-202ENST00000368687 C7orf33Q8WU49 177 aa11.75□□□□□ -0.53
CHTOP-202ENST00000368687 TRBV30A0A0K0K1B3 111 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 RPL37AP61513 92 aaKnown RBP11.74□□□□□ -0.53
CHTOP-202ENST00000368687 Q8IZM0 81 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 LINC00469Q8N7U9 141 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 STPG4Q8N801 248 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 URB1-AS1Q96HZ7 61 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 MYCBP2O75592 4640 aa11.74□□□□□ -0.53
CHTOP-202ENST00000368687 IGLV5-45A0A087WSX0 123 aa11.73□□□□□ -0.53
CHTOP-202ENST00000368687 A0A096LNJ9 63 aa11.73□□□□□ -0.53
CHTOP-202ENST00000368687 A0A0J9YXV3 536 aa11.73□□□□□ -0.53
CHTOP-202ENST00000368687 KIAA0087Q14695 138 aa11.73□□□□□ -0.53
CHTOP-202ENST00000368687 CDKN2A-AS1Q9UH64 79 aa11.73□□□□□ -0.53
CHTOP-202ENST00000368687 TLX1NBP0CAT3 122 aa11.72□□□□□ -0.53
CHTOP-202ENST00000368687 CXCL5P42830 114 aa11.72□□□□□ -0.53
CHTOP-202ENST00000368687 CKS1BP61024 79 aa11.72□□□□□ -0.53
CHTOP-202ENST00000368687 FLG2Q5D862 2391 aaPredicted RBP11.71□□□□□ -0.53
CHTOP-202ENST00000368687 H3BRM9 83 aa11.71□□□□□ -0.53
CHTOP-202ENST00000368687 RPL18AQ02543 176 aaKnown RBP11.71□□□□□ -0.53
CHTOP-202ENST00000368687 GAGE2BQ13066 116 aa11.71□□□□□ -0.53
CHTOP-202ENST00000368687 PDZD11Q5EBL8 140 aa11.71□□□□□ -0.53
CHTOP-202ENST00000368687 C6orf226Q5I0X4 101 aa11.71□□□□□ -0.53
CHTOP-202ENST00000368687 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms