RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 FABP4P15090 132 aa9.14□□□□□ -0.95
TPM3-211ENST00000368531 KRTAP10-2P60368 255 aa9.14□□□□□ -0.95
TPM3-211ENST00000368531 LINC00242Q5T6M2 205 aa9.14□□□□□ -0.95
TPM3-211ENST00000368531 IFI27L1Q96BM0 104 aa9.14□□□□□ -0.95
TPM3-211ENST00000368531 CST9LQ9H4G1 147 aa9.14□□□□□ -0.95
TPM3-211ENST00000368531 COX7A2LO14548 114 aa9.13□□□□□ -0.95
TPM3-211ENST00000368531 LEPROTL1O95214 131 aa9.13□□□□□ -0.95
TPM3-211ENST00000368531 PRSS1P07477 247 aa9.13□□□□□ -0.95
TPM3-211ENST00000368531 MALP21145 153 aa9.13□□□□□ -0.95
TPM3-211ENST00000368531 HIGD2BQ4VC39 106 aa9.13□□□□□ -0.95
TPM3-211ENST00000368531 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
TPM3-211ENST00000368531 H0Y8G0 127 aa9.12□□□□□ -0.95
TPM3-211ENST00000368531 C14orf177Q52M58 125 aa9.12□□□□□ -0.95
TPM3-211ENST00000368531 CFAP161Q6P656 301 aa9.12□□□□□ -0.95
TPM3-211ENST00000368531 GEMIN7Q9H840 131 aaKnown RBP9.12□□□□□ -0.95
TPM3-211ENST00000368531 IGHV3OR16-9A0A0B4J2B5 98 aa9.11□□□□□ -0.95
TPM3-211ENST00000368531 C15orf56Q8N910 161 aa9.11□□□□□ -0.95
TPM3-211ENST00000368531 IGLV5-52A0A0A0MRZ9 124 aa9.1□□□□□ -0.95
TPM3-211ENST00000368531 IGHV1-58A0A0C4DH39 117 aa9.1□□□□□ -0.95
TPM3-211ENST00000368531 LCE2CQ5TA81 110 aa9.1□□□□□ -0.95
TPM3-211ENST00000368531 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
TPM3-211ENST00000368531 HSPB8Q9UJY1 196 aa9.1□□□□□ -0.95
TPM3-211ENST00000368531 HERVK_113P63121 156 aa9.09□□□□□ -0.95
TPM3-211ENST00000368531 SEC11AP67812 179 aa9.09□□□□□ -0.95
TPM3-211ENST00000368531 COA6Q5JTJ3 125 aaKnown RBP9.09□□□□□ -0.95
TPM3-211ENST00000368531 PGPEP1Q9NXJ5 209 aa9.09□□□□□ -0.95
TPM3-211ENST00000368531 FRAS1Q86XX4 4008 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 DNAH2Q9P225 4427 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 DNAH10Q8IVF4 4471 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 C16orf90A8MZG2 172 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 APOMO95445 188 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 FAM19A3Q7Z5A8 133 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 LINC00469Q8N7U9 141 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 CDKN2A-AS1Q9UH64 79 aa9.08□□□□□ -0.96
TPM3-211ENST00000368531 CHTOPQ9Y3Y2 248 aaKnown RBP9.08□□□□□ -0.96
TPM3-211ENST00000368531 A0A087WZ39 114 aa9.07□□□□□ -0.96
TPM3-211ENST00000368531 TINCRA0A1B0GVN0 87 aa9.07□□□□□ -0.96
TPM3-211ENST00000368531 LINC01620Q4KN68 170 aa9.07□□□□□ -0.96
TPM3-211ENST00000368531 ORAOV1Q8WV07 137 aa9.07□□□□□ -0.96
TPM3-211ENST00000368531 CHAC1Q9BUX1 264 aa9.07□□□□□ -0.96
TPM3-211ENST00000368531 DNAH17Q9UFH2 4485 aa9.06□□□□□ -0.96
TPM3-211ENST00000368531 GVQW2A0A096LPI5 108 aaPredicted RBP9.06□□□□□ -0.96
TPM3-211ENST00000368531 ZNF561-AS1K7EIQ3 104 aa9.06□□□□□ -0.96
TPM3-211ENST00000368531 NTN5Q8WTR8 489 aaPredicted RBP9.06□□□□□ -0.96
TPM3-211ENST00000368531 PACRGQ96M98 296 aaPredicted RBP9.06□□□□□ -0.96
TPM3-211ENST00000368531 IGLV4-69A0A075B6H9 119 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 IGHV3-64A0A075B6Q5 118 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 SLPIP03973 132 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 S100A6P06703 90 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 IGLC3P0DOY3 106 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 SPAG11BQ08648 103 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 CDPF1Q6NVV7 123 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 MAP1LC3CQ9BXW4 147 aa9.05□□□□□ -0.96
TPM3-211ENST00000368531 TRAV12-1A0A0B4J245 112 aa9.04□□□□□ -0.96
TPM3-211ENST00000368531 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
TPM3-211ENST00000368531 MRPL35Q9NZE8 188 aaKnown RBP9.04□□□□□ -0.96
TPM3-211ENST00000368531 TOMM7Q9P0U1 55 aa9.04□□□□□ -0.96
TPM3-211ENST00000368531 F8VRH5 84 aa9.03□□□□□ -0.96
TPM3-211ENST00000368531 SPINK8P0C7L1 97 aa9.03□□□□□ -0.96
TPM3-211ENST00000368531 GCSHP23434 173 aa9.03□□□□□ -0.96
TPM3-211ENST00000368531 TMEM170BQ5T4T1 132 aa9.03□□□□□ -0.96
TPM3-211ENST00000368531 PMCHL2Q9BQD1 86 aa9.03□□□□□ -0.96
TPM3-211ENST00000368531 IGLV5-45A0A087WSX0 123 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 ZNF22P17026 224 aaPredicted RBP9.02□□□□□ -0.97
TPM3-211ENST00000368531 S100A2P29034 98 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 KRTAP10-1P60331 282 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 ODF1Q14990 250 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 LINC01561Q8N1V8 128 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 OR10D4PQ8NGN7 298 aa9.02□□□□□ -0.97
TPM3-211ENST00000368531 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.01□□□□□ -0.97
TPM3-211ENST00000368531 H3BRM9 83 aa9.01□□□□□ -0.97
TPM3-211ENST00000368531 PRSS2P07478 247 aa9.01□□□□□ -0.97
TPM3-211ENST00000368531 KRTDAPP60985 99 aa9.01□□□□□ -0.97
TPM3-211ENST00000368531 SNRPEP62304 92 aaKnown RBP9.01□□□□□ -0.97
TPM3-211ENST00000368531 HIST3H2BBQ8N257 126 aa9.01□□□□□ -0.97
TPM3-211ENST00000368531 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
TPM3-211ENST00000368531 FAT2Q9NYQ8 4349 aa9□□□□□ -0.97
TPM3-211ENST00000368531 SMIM1B2RUZ4 78 aa9□□□□□ -0.97
TPM3-211ENST00000368531 SYS1-DBNDD2H3BUS1 97 aa9□□□□□ -0.97
TPM3-211ENST00000368531 CNBPP62633 177 aaKnown RBP9□□□□□ -0.97
TPM3-211ENST00000368531 SYCNQ0VAF6 134 aa9□□□□□ -0.97
TPM3-211ENST00000368531 CARD19Q96LW7 228 aa9□□□□□ -0.97
TPM3-211ENST00000368531 C3orf79P0CE67 100 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 KIAA0087Q14695 138 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 C6orf226Q5I0X4 101 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 C2orf82Q6UX34 121 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 Q6ZRU5 148 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 C9orf163Q8N9P6 203 aa8.99□□□□□ -0.97
TPM3-211ENST00000368531 UNQ6190/PRO20217Q6UXQ8 127 aa8.98□□□□□ -0.97
TPM3-211ENST00000368531 C2orf48Q96LS8 159 aa8.98□□□□□ -0.97
TPM3-211ENST00000368531 TMA7Q9Y2S6 64 aaKnown RBP8.98□□□□□ -0.97
TPM3-211ENST00000368531 NDUFA1O15239 70 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 DPM2O94777 84 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 CKS1BP61024 79 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 C10orf25Q5T742 122 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 COX7B2Q8TF08 81 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 HIST1H2BLQ99880 126 aa8.97□□□□□ -0.97
TPM3-211ENST00000368531 IGKCP01834 107 aa8.96□□□□□ -0.98
TPM3-211ENST00000368531 PLNP26678 52 aa8.96□□□□□ -0.98
TPM3-211ENST00000368531 PET117Q6UWS5 81 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms