RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 FAM104AQ969W3 186 aa14.2□□□□□ -0.14
TRIM58-201ENST00000366481 PEMTQ9UBM1 199 aa14.2□□□□□ -0.14
TRIM58-201ENST00000366481 UBR5O95071 2799 aaPredicted RBP14.2□□□□□ -0.14
TRIM58-201ENST00000366481 COX6A2Q02221 97 aa14.2□□□□□ -0.14
TRIM58-201ENST00000366481 A0A1B0GX51 115 aa14.19□□□□□ -0.14
TRIM58-201ENST00000366481 ZNF843Q8N446 348 aa14.19□□□□□ -0.14
TRIM58-201ENST00000366481 IGKV3OR2-268A0A0C4DH90 116 aa14.19□□□□□ -0.14
TRIM58-201ENST00000366481 RBMY1BA6NDE4 496 aaKnown RBP14.19□□□□□ -0.14
TRIM58-201ENST00000366481 RBMY1EA6NEQ0 496 aaKnown RBP14.19□□□□□ -0.14
TRIM58-201ENST00000366481 RBMY1DP0C7P1 496 aaKnown RBP14.19□□□□□ -0.14
TRIM58-201ENST00000366481 TOMM7Q9P0U1 55 aa14.19□□□□□ -0.14
TRIM58-201ENST00000366481 TRACP01848 142 aa14.18□□□□□ -0.14
TRIM58-201ENST00000366481 CHCHD7Q9BUK0 85 aa14.18□□□□□ -0.14
TRIM58-201ENST00000366481 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.18□□□□□ -0.14
TRIM58-201ENST00000366481 COPS9Q8WXC6 57 aa14.18□□□□□ -0.14
TRIM58-201ENST00000366481 A0A1W2PRX2 142 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 FAM218AQ96MZ4 157 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 C14orf132Q9NPU4 83 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 TIMM17BO60830 172 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 Q96MF0 132 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 ZNF702PQ9H963 129 aa14.17□□□□□ -0.14
TRIM58-201ENST00000366481 SOSTDC1Q6X4U4 206 aa14.16□□□□□ -0.14
TRIM58-201ENST00000366481 UNC79Q9P2D8 2635 aa14.16□□□□□ -0.14
TRIM58-201ENST00000366481 ATOX1O00244 68 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 C5orf47Q569G3 176 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 SMIM9A6NGZ8 99 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 CRPP02741 224 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 MALP21145 153 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 HIST1H4AP62805 103 aaKnown RBP14.15□□□□□ -0.14
TRIM58-201ENST00000366481 UBE2E2Q96LR5 201 aa14.15□□□□□ -0.14
TRIM58-201ENST00000366481 OR13C6PQ8NH95 151 aa14.14□□□□□ -0.15
TRIM58-201ENST00000366481 XCL2Q9UBD3 114 aa14.14□□□□□ -0.15
TRIM58-201ENST00000366481 A0A087WVE0 104 aa14.14□□□□□ -0.15
TRIM58-201ENST00000366481 ATP5G1P05496 136 aa14.14□□□□□ -0.15
TRIM58-201ENST00000366481 SETXQ7Z333 2677 aaKnown RBP14.13□□□□□ -0.15
TRIM58-201ENST00000366481 IGHV3-53P01767 116 aa14.12□□□□□ -0.15
TRIM58-201ENST00000366481 NBEAL2Q6ZNJ1 2754 aa14.12□□□□□ -0.15
TRIM58-201ENST00000366481 LRRC75A-AS1Q8N1F1 130 aa14.11□□□□□ -0.15
TRIM58-201ENST00000366481 ZNF415Q09FC8 603 aa14.1□□□□□ -0.15
TRIM58-201ENST00000366481 CXCL5P42830 114 aa14.1□□□□□ -0.15
TRIM58-201ENST00000366481 LINC00242Q5T6M2 205 aa14.1□□□□□ -0.15
TRIM58-201ENST00000366481 KIR2DL5BQ8NHK3 375 aa14.1□□□□□ -0.15
TRIM58-201ENST00000366481 DYNLRB2Q8TF09 96 aa14.1□□□□□ -0.15
TRIM58-201ENST00000366481 LINC00158P58513 81 aa14.09□□□□□ -0.15
TRIM58-201ENST00000366481 DSCR8Q96T75 97 aa14.09□□□□□ -0.15
TRIM58-201ENST00000366481 A0A096LNT2 108 aa14.09□□□□□ -0.15
TRIM58-201ENST00000366481 C5orf38Q86SI9 138 aa14.08□□□□□ -0.16
TRIM58-201ENST00000366481 Q6YL49 198 aa14.08□□□□□ -0.16
TRIM58-201ENST00000366481 WFDC11Q8NEX6 87 aa14.08□□□□□ -0.16
TRIM58-201ENST00000366481 IGHV4-31P0DP07 118 aa14.07□□□□□ -0.16
TRIM58-201ENST00000366481 RPL18AQ02543 176 aaKnown RBP14.07□□□□□ -0.16
TRIM58-201ENST00000366481 CYSTM1Q9H1C7 97 aa14.06□□□□□ -0.16
TRIM58-201ENST00000366481 SMIM1B2RUZ4 78 aa14.06□□□□□ -0.16
TRIM58-201ENST00000366481 SLPIP03973 132 aa14.06□□□□□ -0.16
TRIM58-201ENST00000366481 MIR7-3HGQ8N6C7 128 aa14.06□□□□□ -0.16
TRIM58-201ENST00000366481 SND1-IT1Q9HBX3 110 aa14.06□□□□□ -0.16
TRIM58-201ENST00000366481 TRAV13-2A0A0B4J235 113 aa14.05□□□□□ -0.16
TRIM58-201ENST00000366481 TEP1Q99973 2627 aaKnown RBP14.05□□□□□ -0.16
TRIM58-201ENST00000366481 RNASE1P07998 156 aaKnown RBP14.05□□□□□ -0.16
TRIM58-201ENST00000366481 NCR3O14931 201 aa14.05□□□□□ -0.16
TRIM58-201ENST00000366481 MAP6D1Q9H9H5 199 aa14.05□□□□□ -0.16
TRIM58-201ENST00000366481 A0A087WYN8 130 aa14.04□□□□□ -0.16
TRIM58-201ENST00000366481 LECT2O14960 151 aa14.04□□□□□ -0.16
TRIM58-201ENST00000366481 CRYGAP11844 174 aa14.04□□□□□ -0.16
TRIM58-201ENST00000366481 PFN2P35080 140 aa14.04□□□□□ -0.16
TRIM58-201ENST00000366481 RNF152Q8N8N0 203 aa14.04□□□□□ -0.16
TRIM58-201ENST00000366481 TRGV1A0A0A0MS02 117 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 C9orf129Q5T035 196 aaKnown RBP14.03□□□□□ -0.16
TRIM58-201ENST00000366481 C2orf48Q96LS8 159 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 LINC00846Q9NV44 126 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 UBE2L6O14933 153 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 DSCR9P59020 149 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 PAX4O43316 350 aa14.03□□□□□ -0.16
TRIM58-201ENST00000366481 C11orf68Q9H3H3 251 aaKnown RBP14.02□□□□□ -0.16
TRIM58-201ENST00000366481 ATRQ13535 2644 aa14.02□□□□□ -0.17
TRIM58-201ENST00000366481 BEAN1Q3B7T3 259 aa14.02□□□□□ -0.17
TRIM58-201ENST00000366481 TMEM89A2RUT3 159 aa14.01□□□□□ -0.17
TRIM58-201ENST00000366481 RPL36AP83881 106 aaKnown RBP14.01□□□□□ -0.17
TRIM58-201ENST00000366481 RPL36ALQ969Q0 106 aaKnown RBP14.01□□□□□ -0.17
TRIM58-201ENST00000366481 SERP2Q8N6R1 65 aa14.01□□□□□ -0.17
TRIM58-201ENST00000366481 IGLV5-39A0A0G2JS06 123 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 USP17L23D6RBM5 183 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 FAM222AQ5U5X8 452 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 LINC00337Q8N6G1 96 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 SMIM11BQ8TCY0 68 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 C22orf24Q9Y442 160 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 DEFB113Q30KQ7 82 aa14□□□□□ -0.17
TRIM58-201ENST00000366481 WFDC9Q8NEX5 89 aa13.99□□□□□ -0.17
TRIM58-201ENST00000366481 WFDC10AQ9H1F0 79 aa13.99□□□□□ -0.17
TRIM58-201ENST00000366481 CR1P17927 2039 aa13.99□□□□□ -0.17
TRIM58-201ENST00000366481 IGLV5-45A0A087WSX0 123 aa13.98□□□□□ -0.17
TRIM58-201ENST00000366481 PLA2G2AP14555 144 aa13.98□□□□□ -0.17
TRIM58-201ENST00000366481 J3QLI3 93 aa13.98□□□□□ -0.17
TRIM58-201ENST00000366481 DEFB114Q30KQ6 69 aa13.98□□□□□ -0.17
TRIM58-201ENST00000366481 DPH3Q96FX2 82 aa13.97□□□□□ -0.17
TRIM58-201ENST00000366481 C11orf72Q8NBR9 251 aa13.97□□□□□ -0.17
TRIM58-201ENST00000366481 TRAV23DV6A0A075B6W5 121 aa13.96□□□□□ -0.17
TRIM58-201ENST00000366481 RPL28P46779 137 aaKnown RBP13.96□□□□□ -0.17
TRIM58-201ENST00000366481 HRCT1Q6UXD1 115 aa13.96□□□□□ -0.17
TRIM58-201ENST00000366481 TMEM258P61165 79 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms