RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 GNG4P50150 75 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 TAS2R45P59539 299 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 SERF2P84101 59 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 HSD52Q0P140 79 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 GAGE6Q13070 117 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 CHCHD5Q9BSY4 110 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 ST20Q9HBF5 79 aa5.15□□□□□ -1.59
HMGB1P39-201ENST00000366304 A0A1W2PPV4 95 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 FAM231BA6NCW3 169 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 H3BVH4 76 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 MT-ND6P03923 174 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 BCL2P10415 239 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 HINT1P49773 126 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 RPL24P83731 157 aaKnown RBP5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 CST9LP1Q5W188 147 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 AMMECR1LQ6DCA0 310 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 NEXN-AS1Q8NBZ9 246 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 OR10G8Q8NGN5 311 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 BORCS7Q96B45 105 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 MLST8Q9BVC4 326 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 GEMIN7Q9H840 131 aaKnown RBP5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 MANBALQ9NQG1 85 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 MUC17Q685J3 4493 aa5.14□□□□□ -1.59
HMGB1P39-201ENST00000366304 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 K7EQM0 130 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 TAX1BP3O14907 124 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 RPL36AP83881 106 aaKnown RBP5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 PQLC2Q6ZP29 291 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 Q6ZRP5 223 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 C5orf17Q8NAS9 161 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 RPL36ALQ969Q0 106 aaKnown RBP5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 PSG8Q9UQ74 426 aa5.13□□□□□ -1.59
HMGB1P39-201ENST00000366304 TRBV10-1A0A0K0K1A3 114 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 GRIFINA4D1Z8 144 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 GAGE12HA6NDE8 117 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 H3BRM9 83 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 RHODO00212 210 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 ARMS2P0C7Q2 107 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 ARL14EPLP0DKL9 152 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 REG3AQ06141 175 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 HIGD2BQ4VC39 106 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 BAGE3Q86Y29 109 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 BAGE2Q86Y30 109 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 C20orf203Q8NBC4 194 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 SMIM7Q9BQ49 75 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 SPANXDQ9BXN6 97 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 IL36BQ9NZH7 164 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 PSORS1C2Q9UIG4 136 aa5.12□□□□□ -1.59
HMGB1P39-201ENST00000366304 IGLV4-60A0A075B6I1 120 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 TRAV26-2A0A0B4J265 109 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 TCRAP04437 139 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 S100A4P26447 101 aaKnown RBP5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 CRIP1P50238 77 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 CCL20P78556 96 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 ZNF726P1Q15940 193 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 ERASQ7Z444 233 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 PRNTQ86SH4 94 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 DERL1Q9BUN8 251 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 TPPP3Q9BW30 176 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 CYSLTR1Q9Y271 337 aa5.11□□□□□ -1.59
HMGB1P39-201ENST00000366304 CTXND1A0A1B0GTU2 59 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 B5MCH6 92 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 F8W1H4 67 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 K7EP34 96 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 CXorf1O96002 111 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 KRTAP1-4P0C5Y4 121 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 GCHFRP30047 84 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 RPL23P62829 140 aaKnown RBP5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 CACNG7P62955 275 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 BVES-AS1Q5T3Y7 98 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 SLC25A34Q6PIV7 304 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 NDFIP1Q9BT67 221 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 GNB1LQ9BYB4 327 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 TMEM167BQ9NRX6 74 aa5.1□□□□□ -1.59
HMGB1P39-201ENST00000366304 TRAV34A0A0B4J273 112 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 A0A1B0GW15 77 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 A0A1W2PNN7 141 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 M0R381 172 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 KRTDAPP60985 99 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 HERV-K104P63124 156 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 ERG28Q9UKR5 140 aa5.09□□□□□ -1.59
HMGB1P39-201ENST00000366304 PMCHP20382 165 aa5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 MEF2BQ02080 365 aaPredicted RBP5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 SMAGPQ0VAQ4 97 aa5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 LINC00526Q96FQ7 95 aa5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 GNG13Q9P2W3 67 aa5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 HSPB8Q9UJY1 196 aa5.08□□□□□ -1.6
HMGB1P39-201ENST00000366304 TRAV8-4A0A0B4J246 113 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 TRBV6-1A0A0K0K1D8 114 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 A0A1W2PRE2 83 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 SERF1AO75920 110 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 P01737 135 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 OR5AL1P0C617 328 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 RASL11AQ6T310 242 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 KRTAP11-1Q8IUC1 163 aa5.07□□□□□ -1.6
HMGB1P39-201ENST00000366304 C18orf32Q8TCD1 76 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms