RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 RPL7L1Q6DKI1 246 aaKnown RBP-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 FAM24BQ8N5W8 94 aa-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 CRIPTQ9P021 101 aa-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 HIGD1BQ9P298 99 aa-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 CCDC141Q6ZP82 1450 aa-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 KIF21AQ7Z4S6 1674 aa-3.76□□□□□ -3.01
RNU4-40P-201ENST00000364351 LINC01600Q96MT4 127 aa-3.77□□□□□ -3.01
RNU4-40P-201ENST00000364351 YTHDC2Q9H6S0 1430 aaKnown RBP-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 IFNA1P01562 189 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 SPANXN1Q5VSR9 72 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 Q6AWC8 147 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 SCIMPQ6UWF3 145 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 TMED4Q7Z7H5 227 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 MRPL40Q9NQ50 206 aaKnown RBP-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 MYH8P13535 1937 aa-3.78□□□□□ -3.01
RNU4-40P-201ENST00000364351 RPL7P18124 248 aaKnown RBP-3.79□□□□□ -3.02
RNU4-40P-201ENST00000364351 V9GYH0 126 aa-3.79□□□□□ -3.02
RNU4-40P-201ENST00000364351 A6NIN4 97 aa-3.8□□□□□ -3.02
RNU4-40P-201ENST00000364351 TRAPPC2LQ9UL33 140 aa-3.8□□□□□ -3.02
RNU4-40P-201ENST00000364351 ABCC10Q5T3U5 1492 aa-3.8□□□□□ -3.02
RNU4-40P-201ENST00000364351 CEP350Q5VT06 3117 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 GNG3P63215 75 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 CLLU1Q5K131 121 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 STX12Q86Y82 276 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 ERCC6Q03468 1493 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 MAGI2Q86UL8 1455 aa-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 MARF1Q9Y4F3 1742 aaKnown RBP-3.81□□□□□ -3.02
RNU4-40P-201ENST00000364351 UBE2G1P62253 170 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 DCUN1D2Q6PH85 259 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 DHRS4L2Q6PKH6 230 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 SPTSSBQ8NFR3 76 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 PLB1Q6P1J6 1458 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 SHANK2Q9UPX8 1470 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 MYH3P11055 1940 aa-3.82□□□□□ -3.02
RNU4-40P-201ENST00000364351 E7EQ34 232 aa-3.83□□□□□ -3.02
RNU4-40P-201ENST00000364351 TNP1P09430 55 aa-3.83□□□□□ -3.02
RNU4-40P-201ENST00000364351 RPS29P62273 56 aaKnown RBP-3.83□□□□□ -3.02
RNU4-40P-201ENST00000364351 SMIM20Q8N5G0 67 aa-3.83□□□□□ -3.02
RNU4-40P-201ENST00000364351 PPP1R14BQ96C90 147 aa-3.83□□□□□ -3.02
RNU4-40P-201ENST00000364351 FAM107AO95990 144 aa-3.84□□□□□ -3.02
RNU4-40P-201ENST00000364351 MGPP08493 103 aa-3.84□□□□□ -3.02
RNU4-40P-201ENST00000364351 NWD2Q9ULI1 1742 aa-3.84□□□□□ -3.02
RNU4-40P-201ENST00000364351 DAPK1P53355 1430 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 UQCR11O14957 56 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 APOC3P02656 99 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 HLA-DRB4P13762 266 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 Q6ZUT4 128 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 BAGE2Q86Y30 109 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 CCDC32Q9BV29 185 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 HLA-DRB4X5D2U9 266 aa-3.85□□□□□ -3.03
RNU4-40P-201ENST00000364351 CDKN2CP42773 168 aa-3.86□□□□□ -3.03
RNU4-40P-201ENST00000364351 POLR2HP52434 150 aaKnown RBP-3.86□□□□□ -3.03
RNU4-40P-201ENST00000364351 LSM2Q9Y333 95 aaKnown RBP-3.86□□□□□ -3.03
RNU4-40P-201ENST00000364351 TMEM238C9JI98 176 aa-3.87□□□□□ -3.03
RNU4-40P-201ENST00000364351 NIPSNAP2O75323 286 aa-3.87□□□□□ -3.03
RNU4-40P-201ENST00000364351 LENEPQ9Y5L5 61 aa-3.87□□□□□ -3.03
RNU4-40P-201ENST00000364351 RAPGEF6Q8TEU7 1601 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 FAM223BA6NKX1 122 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 HCG22E2RYF7 251 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 TCTAP57738 103 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 B2MP61769 119 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 CCL8P80075 99 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 THEM6Q8WUY1 208 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 BANF2Q9H503 90 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 CALML5Q9NZT1 146 aa-3.88□□□□□ -3.03
RNU4-40P-201ENST00000364351 TRBV7-3A0A075B6L6 115 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 SMIM24O75264 130 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 TPPP2P59282 170 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 CEP19Q96LK0 163 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 CCDC115Q96NT0 180 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 LINC00846Q9NV44 126 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 UBE2D4Q9Y2X8 147 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 DISP2A7MBM2 1401 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 NCOA3Q9Y6Q9 1424 aa-3.89□□□□□ -3.03
RNU4-40P-201ENST00000364351 PTRHD1Q6GMV3 140 aaKnown RBP-3.9□□□□□ -3.03
RNU4-40P-201ENST00000364351 PP6455Q8WZ26 134 aa-3.9□□□□□ -3.03
RNU4-40P-201ENST00000364351 CBLN1P23435 193 aa-3.91□□□□□ -3.04
RNU4-40P-201ENST00000364351 FDCSPQ8NFU4 85 aa-3.91□□□□□ -3.04
RNU4-40P-201ENST00000364351 RIMS1Q86UR5 1692 aaKnown RBP-3.91□□□□□ -3.04
RNU4-40P-201ENST00000364351 MYH7P12883 1935 aa-3.91□□□□□ -3.04
RNU4-40P-201ENST00000364351 CLIP1P30622 1438 aa-3.92□□□□□ -3.04
RNU4-40P-201ENST00000364351 C10orf113Q5VZT2 155 aa-3.92□□□□□ -3.04
RNU4-40P-201ENST00000364351 TMEM263Q8WUH6 116 aaKnown RBP-3.92□□□□□ -3.04
RNU4-40P-201ENST00000364351 TPT1P8Q9HAU6 139 aa-3.92□□□□□ -3.04
RNU4-40P-201ENST00000364351 ARHGEF10O15013 1369 aa-3.92□□□□□ -3.04
RNU4-40P-201ENST00000364351 MMP24-AS1A0A0U1RRL7 71 aa-3.93□□□□□ -3.04
RNU4-40P-201ENST00000364351 PAEPP09466 180 aa-3.94□□□□□ -3.04
RNU4-40P-201ENST00000364351 RGS21Q2M5E4 152 aa-3.94□□□□□ -3.04
RNU4-40P-201ENST00000364351 MIC13Q5XKP0 118 aa-3.94□□□□□ -3.04
RNU4-40P-201ENST00000364351 CFAP53Q96M91 514 aa-3.94□□□□□ -3.04
RNU4-40P-201ENST00000364351 SIX6O95475 246 aa-3.95□□□□□ -3.04
RNU4-40P-201ENST00000364351 MT-ND4LP03901 98 aa-3.95□□□□□ -3.04
RNU4-40P-201ENST00000364351 CTXN2P0C2S0 81 aa-3.95□□□□□ -3.04
RNU4-40P-201ENST00000364351 S100A7L2Q5SY68 101 aa-3.95□□□□□ -3.04
RNU4-40P-201ENST00000364351 WDFY4Q6ZS81 3184 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 A0A1W2PRE2 83 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 PFDN1O60925 122 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 DPM2O94777 84 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 C10orf128Q5T292 105 aa-3.96□□□□□ -3.04
RNU4-40P-201ENST00000364351 TMEM78Q5T7P6 136 aa-3.96□□□□□ -3.04
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms