RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 IGKV2D-26A0A0A0MRZ7 120 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 FAM19A5Q7Z5A7 132 aaPredicted RBP9.76□□□□□ -0.85
LDB3-202ENST00000361373 MAPKAPK5-AS1Q8N8E1 139 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 ZNF706Q9Y5V0 76 aaPredicted RBP9.76□□□□□ -0.85
LDB3-202ENST00000361373 BPY2O14599 106 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 DHRS4-AS1Q9P1J3 65 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 TRAV23DV6A0A075B6W5 121 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 C1orf158Q8N1D5 194 aa9.76□□□□□ -0.85
LDB3-202ENST00000361373 H0Y9J4 135 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 C6orf99Q4VX62 202 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 IGIPA6NJ69 53 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 C14orf132Q9NPU4 83 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 IGLV2-18A0A075B6J9 118 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 BEAN1Q3B7T3 259 aa9.75□□□□□ -0.85
LDB3-202ENST00000361373 FASNP49327 2511 aaKnown RBP9.74□□□□□ -0.85
LDB3-202ENST00000361373 PRM2P04554 102 aa9.74□□□□□ -0.85
LDB3-202ENST00000361373 RNASE8Q8TDE3 154 aaKnown RBP9.74□□□□□ -0.85
LDB3-202ENST00000361373 CSDC2Q9Y534 153 aaKnown RBP9.74□□□□□ -0.85
LDB3-202ENST00000361373 EDN2P20800 178 aa9.73□□□□□ -0.85
LDB3-202ENST00000361373 ATP5EP2Q5VTU8 51 aa9.73□□□□□ -0.85
LDB3-202ENST00000361373 RAI1Q7Z5J4 1906 aaPredicted RBP9.73□□□□□ -0.85
LDB3-202ENST00000361373 SETD2Q9BYW2 2564 aaPredicted RBP9.72□□□□□ -0.85
LDB3-202ENST00000361373 FAM236AA0A1B0GUQ0 79 aa9.72□□□□□ -0.85
LDB3-202ENST00000361373 FAM236BA0A1B0GV22 79 aa9.72□□□□□ -0.85
LDB3-202ENST00000361373 LY6G6CO95867 125 aa9.72□□□□□ -0.85
LDB3-202ENST00000361373 EXPH5Q8NEV8 1989 aa9.72□□□□□ -0.85
LDB3-202ENST00000361373 EGFEM1PQ0D2K5 195 aa9.72□□□□□ -0.85
LDB3-202ENST00000361373 TRIAP1O43715 76 aa9.71□□□□□ -0.85
LDB3-202ENST00000361373 PRB2P02812 416 aaPredicted RBP9.71□□□□□ -0.85
LDB3-202ENST00000361373 CHKB-CPT1BH3BT56 60 aa9.71□□□□□ -0.86
LDB3-202ENST00000361373 F8WDY8 70 aa9.71□□□□□ -0.86
LDB3-202ENST00000361373 FHL2Q14192 279 aa9.7□□□□□ -0.86
LDB3-202ENST00000361373 LINC00242Q5T6M2 205 aa9.7□□□□□ -0.86
LDB3-202ENST00000361373 COL4A2P08572 1712 aa9.7□□□□□ -0.86
LDB3-202ENST00000361373 SS18L2Q9UHA2 77 aa9.7□□□□□ -0.86
LDB3-202ENST00000361373 GAS8-AS1O95177 125 aa9.69□□□□□ -0.86
LDB3-202ENST00000361373 NHLRC4P0CG21 123 aaPredicted RBP9.69□□□□□ -0.86
LDB3-202ENST00000361373 CYSRT1A8MQ03 144 aa9.69□□□□□ -0.86
LDB3-202ENST00000361373 G3V4G9 280 aa9.69□□□□□ -0.86
LDB3-202ENST00000361373 M0R2N4 97 aa9.69□□□□□ -0.86
LDB3-202ENST00000361373 UPK3BQ9BT76 320 aa9.68□□□□□ -0.86
LDB3-202ENST00000361373 A8MZ25 164 aa9.68□□□□□ -0.86
LDB3-202ENST00000361373 Q6ZTC4 211 aa9.67□□□□□ -0.86
LDB3-202ENST00000361373 A0A1B0GUV1 79 aa9.67□□□□□ -0.86
LDB3-202ENST00000361373 LRCOL1A6NCL2 159 aa9.67□□□□□ -0.86
LDB3-202ENST00000361373 EML5Q05BV3 1969 aa9.67□□□□□ -0.86
LDB3-202ENST00000361373 IGKV2-28A0A075B6P5 120 aa9.66□□□□□ -0.86
LDB3-202ENST00000361373 IGKV2D-28P01615 120 aa9.66□□□□□ -0.86
LDB3-202ENST00000361373 LINC00526Q96FQ7 95 aa9.66□□□□□ -0.86
LDB3-202ENST00000361373 RETNQ9HD89 108 aa9.66□□□□□ -0.86
LDB3-202ENST00000361373 A0A096LNI7 61 aa9.66□□□□□ -0.86
LDB3-202ENST00000361373 ZNF73O43830 326 aaPredicted RBP9.66□□□□□ -0.86
LDB3-202ENST00000361373 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.66□□□□□ -0.86
LDB3-202ENST00000361373 Q6ZQY7 126 aa9.65□□□□□ -0.86
LDB3-202ENST00000361373 SMIM1B2RUZ4 78 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 LST1O00453 97 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 CCKP06307 115 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 MTORP42345 2549 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 SLPIP03973 132 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 C2orf91Q6ZV80 131 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 LINC01561Q8N1V8 128 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 AMELXQ99217 191 aa9.64□□□□□ -0.87
LDB3-202ENST00000361373 TEX49A0A1B0GTD5 131 aa9.63□□□□□ -0.87
LDB3-202ENST00000361373 POM121L12Q8N7R1 296 aa9.63□□□□□ -0.87
LDB3-202ENST00000361373 PKD1L2Q7Z442 2459 aa9.63□□□□□ -0.87
LDB3-202ENST00000361373 B5MCH6 92 aa9.62□□□□□ -0.87
LDB3-202ENST00000361373 SMIM11BQ8TCY0 68 aa9.62□□□□□ -0.87
LDB3-202ENST00000361373 UNQ6190/PRO20217Q6UXQ8 127 aa9.62□□□□□ -0.87
LDB3-202ENST00000361373 URB1-AS1Q96HZ7 61 aa9.61□□□□□ -0.87
LDB3-202ENST00000361373 C2orf48Q96LS8 159 aa9.61□□□□□ -0.87
LDB3-202ENST00000361373 IGLV4-60A0A075B6I1 120 aa9.6□□□□□ -0.87
LDB3-202ENST00000361373 PLAC8L1A1L4L8 177 aa9.6□□□□□ -0.87
LDB3-202ENST00000361373 IGKV4-1P06312 121 aa9.6□□□□□ -0.87
LDB3-202ENST00000361373 FHL3Q13643 280 aa9.6□□□□□ -0.87
LDB3-202ENST00000361373 RPL28P46779 137 aaKnown RBP9.6□□□□□ -0.87
LDB3-202ENST00000361373 SRCAPQ6ZRS2 3230 aa9.59□□□□□ -0.87
LDB3-202ENST00000361373 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
LDB3-202ENST00000361373 LINC00310P59036 64 aa9.59□□□□□ -0.87
LDB3-202ENST00000361373 LYPD5Q6UWN5 251 aa9.59□□□□□ -0.87
LDB3-202ENST00000361373 LINC00694P0DN24 101 aa9.58□□□□□ -0.88
LDB3-202ENST00000361373 USP17L23D6RBM5 183 aa9.58□□□□□ -0.88
LDB3-202ENST00000361373 M0QXV9 152 aa9.57□□□□□ -0.88
LDB3-202ENST00000361373 RPL37AP8A6NKH3 93 aa9.57□□□□□ -0.88
LDB3-202ENST00000361373 NDUFC2-KCTD14E9PQ53 114 aa9.56□□□□□ -0.88
LDB3-202ENST00000361373 CENPFP49454 3210 aa9.55□□□□□ -0.88
LDB3-202ENST00000361373 PPDPFQ9H3Y8 114 aa9.55□□□□□ -0.88
LDB3-202ENST00000361373 NDUFC2O95298 119 aa9.55□□□□□ -0.88
LDB3-202ENST00000361373 C11orf72Q8NBR9 251 aa9.55□□□□□ -0.88
LDB3-202ENST00000361373 KIF25-AS1Q9Y6Z4 181 aa9.55□□□□□ -0.88
LDB3-202ENST00000361373 IMUPQ9GZP8 106 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 SEC61GP60059 68 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 Q6ZSN1 163 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 NDUFV3P56181 108 aaKnown RBP9.54□□□□□ -0.88
LDB3-202ENST00000361373 C6orf223Q8N319 242 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 FSHBP01225 129 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 COX6A2Q02221 97 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 SDIM1Q6ZPB5 146 aa9.54□□□□□ -0.88
LDB3-202ENST00000361373 C1orf134Q5TEV5 83 aa9.53□□□□□ -0.88
LDB3-202ENST00000361373 IGLV5-52A0A0A0MRZ9 124 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms